{ "type": "genome", "identifier": "GCF_025994535.1", "organism": "Gluconacetobacter sacchari DSM 12717", "title": "Gluconacetobacter sacchari DSM 12717", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Tokyo University of Agriculture", "publication": [ {} ], "properties": { "assembly_accession": "GCF_025994535.1", "bioproject": "PRJNA224116", "biosample": "SAMD00036716", "wgs_master": "BAQP00000000.1", "refseq_category": "na", "taxid": "1307940", "species_taxid": "92759", "organism_name": "Gluconacetobacter sacchari DSM 12717", "infraspecific_name": "strain=DSM 12717", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/08/03", "asm_name": "ASM2599453v1", "asm_submitter": "Tokyo University of Agriculture", "gbrs_paired_asm": "GCA_025994535.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/025/994/535/GCF_025994535.1_ASM2599453v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4844205", "genome_size_ungapped": "4844205", "gc_percent": "66.000000", "replicon_count": "0", "scaffold_count": "625", "contig_count": "625", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_025994535.1-RS_2024_12_16", "annotation_date": "2024-12-16", "total_gene_count": "4832", "protein_coding_gene_count": "4515", "non_coding_gene_count": "54", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-08-03", "dateModified": "2022-08-03", "datePublished": "2022-08-03", "_annotation": { "sample_count": 1, "sample_organism": [ "Gluconacetobacter sacchari DSM 12717" ], "sample_taxid": [ "1307940" ], "sample_host_organism": [], 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azospirillum cavernae", "strain": "strain=K2W22B-5", "accession": "GCA_003590795.1", "taxid": 2320860, "species_taxid": 2320860, "relation_to_type": "type", "validated": true, "ani": 75.9701, "matched_fragments": 187, "total_fragments": 1421, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas yunnanensis", "strain": "strain=YIM 3", "accession": "GCA_019898765.1", "taxid": 310400, "species_taxid": 310400, "relation_to_type": "type", "validated": true, "ani": 75.8767, "matched_fragments": 130, "total_fragments": 1421, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.52, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCF_014174255.1", "gtdb_species": "s__Gluconacetobacter sacchari", "ani": 99.9994, "matched_fragments": 1418, "total_fragments": 1421, "gtdb_taxonomy": 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