{ "type": "genome", "identifier": "GCF_025996105.1", "organism": "Acetobacter cibinongensis NRIC 0482", "title": "Acetobacter cibinongensis NRIC 0482", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Tokyo University of Agriculture", "publication": [ {} ], "properties": { "assembly_accession": "GCF_025996105.1", "bioproject": "PRJNA224116", "biosample": "SAMD00036674", "wgs_master": "BAOZ00000000.1", "refseq_category": "na", "taxid": "1307904", "species_taxid": "146475", "organism_name": "Acetobacter cibinongensis NRIC 0482", "infraspecific_name": "strain=NRIC 0482", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/08/03", "asm_name": "ASM2599610v1", "asm_submitter": "Tokyo University of Agriculture", "gbrs_paired_asm": "GCA_025996105.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/025/996/105/GCF_025996105.1_ASM2599610v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3110158", "genome_size_ungapped": "3110158", "gc_percent": "54.500000", "replicon_count": "0", "scaffold_count": "60", "contig_count": "60", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_025996105.1-RS_2024_12_16", "annotation_date": "2024-12-16", "total_gene_count": "2829", "protein_coding_gene_count": "2726", "non_coding_gene_count": "51", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-08-03", "dateModified": "2022-08-03", "datePublished": "2022-08-03", "_annotation": { "sample_count": 1, "sample_organism": [ "Acetobacter cibinongensis NRIC 0482" ], "sample_taxid": [ "1307904" ], "sample_host_organism": [], 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"Acetobacter lambici", "strain": "strain=LMG 27439", "accession": "GCA_011516885.1", "taxid": 1332824, "species_taxid": 1332824, "relation_to_type": "type", "validated": true, "ani": 78.6221, "matched_fragments": 274, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acetobacter ghanensis", "strain": "strain=LMG 23848T", "accession": "GCA_001499675.1", "taxid": 431306, "species_taxid": 431306, "relation_to_type": "type", "validated": true, "ani": 78.3964, "matched_fragments": 289, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acetobacter ghanensis", "strain": "strain=LMG 23848", "accession": "GCA_011516865.1", "taxid": 431306, "species_taxid": 431306, "relation_to_type": "type", "validated": true, "ani": 78.3456, "matched_fragments": 294, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acetobacter garciniae", "strain": "strain=TBRC 12339", 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