{ "type": "genome", "identifier": "GCF_026168575.1", "organism": "Acinetobacter entericus", "title": "Acinetobacter entericus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Beijing Institute of Technology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_026168575.1", "bioproject": "PRJNA224116", "biosample": "SAMN31432572", "wgs_master": "JAPEQW000000000.1", "refseq_category": "reference genome", "taxid": "2989714", "species_taxid": "2989714", "organism_name": "Acinetobacter entericus", "infraspecific_name": "strain=BIT-DXN8", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/11/14", "asm_name": "ASM2616857v1", "asm_submitter": "Beijing Institute of Technology", "gbrs_paired_asm": "GCA_026168575.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/026/168/575/GCF_026168575.1_ASM2616857v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4045164", "genome_size_ungapped": "4044882", "gc_percent": "44.000000", "replicon_count": "2", "scaffold_count": "159", "contig_count": "159", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_026168575.1-RS_2024_08_02", "annotation_date": "2024-08-02", "total_gene_count": "3994", "protein_coding_gene_count": "3757", "non_coding_gene_count": "97", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-11-14", "dateModified": "2022-11-14", "datePublished": "2022-11-14", "_annotation": { "sample_count": 1, "sample_organism": [ "Acinetobacter entericus" ], "sample_taxid": [ "2989714" ], "sample_host_organism": [ "Zophobas atratus" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China:Beijing" ], "sample_host_location_id": [], "data_size": "1.146 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4045164", "Number of Sequences": "159", "Longest Sequences (bp)": "305808", "N50 (bp)": "148769", "Gap Ratio (%)": "0.008306", "GCcontent (%)": "43.8", "Number of CDSs": "3791", "Average Protein Length": "298.6", "Coding Ratio (%)": "84.0", "Number of rRNAs": "3", "Number of tRNAs": "88", "Number of CRISPRs": "3" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Acinetobacter bouvetii", "strain": "strain=DSM 14964", "accession": "GCA_000373725.1", "taxid": 202951, "species_taxid": 202951, "relation_to_type": "type", "validated": true, "ani": 95.8024, "matched_fragments": 1020, "total_fragments": 1286, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Acinetobacter bouvetii", "strain": "strain=CIP 107468", "accession": "GCA_000368865.1", "taxid": 202951, "species_taxid": 202951, "relation_to_type": "type", "validated": true, "ani": 95.7096, "matched_fragments": 1030, "total_fragments": 1286, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Acinetobacter pragensis", "strain": "strain=ANC 4149", "accession": "GCA_001605895.1", "taxid": 1806892, "species_taxid": 1806892, "relation_to_type": "type", "validated": true, "ani": 85.6354, "matched_fragments": 891, "total_fragments": 1286, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter tianfuensis", "strain": "strain=WCHAc060012", "accession": "GCA_003611465.1", "taxid": 2419603, "species_taxid": 2419603, "relation_to_type": "type", "validated": true, "ani": 81.4821, "matched_fragments": 655, "total_fragments": 1286, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter celticus", "strain": "strain=ANC 4603", "accession": "GCA_001707755.1", "taxid": 1891224, "species_taxid": 1891224, "relation_to_type": "type", "validated": true, "ani": 81.3041, "matched_fragments": 624, "total_fragments": 1286, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter chengduensis", "strain": "strain=WCHAc060005", "accession": "GCA_003664645.1", "taxid": 2420890, "species_taxid": 2420890, "relation_to_type": "type", "validated": true, "ani": 81.0382, "matched_fragments": 615, "total_fragments": 1286, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter johnsonii", "strain": "strain=NCTC10308", "accession": "GCA_900444855.1", "taxid": 40214, "species_taxid": 40214, "relation_to_type": "suspected-type", "validated": true, "ani": 81.0119, "matched_fragments": 507, "total_fragments": 1286, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter johnsonii", "strain": "strain=DSM 6963", "accession": "GCA_000949655.1", "taxid": 40214, "species_taxid": 40214, "relation_to_type": "suspected-type", "validated": true, "ani": 80.8617, "matched_fragments": 480, "total_fragments": 1286, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter cumulans", "strain": "strain=WCHAc060092", "accession": "GCA_003024525.3", "taxid": 2136182, "species_taxid": 2136182, "relation_to_type": "type", "validated": true, "ani": 80.8328, "matched_fragments": 614, "total_fragments": 1286, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter lwoffii", "strain": "strain=NCTC5866", "accession": "GCA_900699155.1", "taxid": 28090, "species_taxid": 28090, "relation_to_type": "type", "validated": true, "ani": 80.2103, "matched_fragments": 501, "total_fragments": 1286, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter lwoffii", "strain": "strain=FDAARGOS 1393", "accession": "GCA_019048305.1", "taxid": 28090, "species_taxid": 28090, "relation_to_type": "type", "validated": true, "ani": 80.1524, "matched_fragments": 503, "total_fragments": 1286, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter schindleri", "strain": "strain=CIP 107287", "accession": "GCA_000368625.1", "taxid": 108981, "species_taxid": 108981, "relation_to_type": "type", "validated": true, "ani": 80.1136, "matched_fragments": 466, "total_fragments": 1286, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter indicus", "strain": "strain=DSM 25388", "accession": "GCA_000830155.1", "taxid": 756892, "species_taxid": 756892, "relation_to_type": "type", "validated": true, "ani": 79.9847, "matched_fragments": 506, "total_fragments": 1286, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter pecorum", "strain": "strain=Sa1BUA6", "accession": "GCA_014837015.1", "taxid": 2762215, "species_taxid": 2762215, "relation_to_type": "type", "validated": true, "ani": 79.8681, "matched_fragments": 474, "total_fragments": 1286, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter pseudolwoffii", "strain": "strain=ANC 5044", "accession": "GCA_002803605.1", "taxid": 2053287, "species_taxid": 2053287, "relation_to_type": "type", "validated": true, "ani": 79.8487, "matched_fragments": 496, "total_fragments": 1286, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter ihumii", "strain": "strain=Marseille-P8049", "accession": "GCA_900625095.1", "taxid": 2483802, "species_taxid": 2483802, "relation_to_type": "type", "validated": true, "ani": 78.9141, "matched_fragments": 301, "total_fragments": 1286, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter baumannii", "strain": "strain=PartI-Abaumannii-RM8376", "accession": "GCA_022870045.1", 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"min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_902753875.1", "gtdb_species": "s__Acinetobacter bouvetii_A", "ani": 80.9733, "matched_fragments": 562, "total_fragments": 1286, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002135295.1", "gtdb_species": "s__Acinetobacter sp002135295", "ani": 80.9241, "matched_fragments": 574, "total_fragments": 1286, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", 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