{
    "type": "genome",
    "identifier": "GCF_026242195.1",
    "organism": "Halorutilus salinus",
    "title": "Halorutilus salinus",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Sevilla, Spain",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_026242195.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN10397913",
        "wgs_master": "RKLV00000000.1",
        "refseq_category": "reference genome",
        "taxid": "2487751",
        "species_taxid": "2487751",
        "organism_name": "Halorutilus salinus",
        "infraspecific_name": "strain=F3-133",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/11/20",
        "asm_name": "ASM2624219v1",
        "asm_submitter": "University of Sevilla, Spain",
        "gbrs_paired_asm": "GCA_026242195.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/026/242/195/GCF_026242195.1_ASM2624219v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "archaea",
        "genome_size": "2103777",
        "genome_size_ungapped": "2103391",
        "gc_percent": "60.000000",
        "replicon_count": "0",
        "scaffold_count": "17",
        "contig_count": "17",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_026242195.1-RS_2024_03_29",
        "annotation_date": "2024-03-29",
        "total_gene_count": "2361",
        "protein_coding_gene_count": "2302",
        "non_coding_gene_count": "52",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-11-20",
    "dateModified": "2022-11-20",
    "datePublished": "2022-11-20",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Halorutilus salinus"
        ],
        "sample_taxid": [
            "2487751"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Spain: Isla Cristina, Huelva"
        ],
        "sample_host_location_id": [],
        "data_size": "0.583 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.67,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2103777",
        "Number of Sequences": "17",
        "Longest Sequences (bp)": "316034",
        "N50 (bp)": "189022",
        "Gap Ratio (%)": "0.018348",
        "GCcontent (%)": "59.8",
        "Number of CDSs": "2297",
        "Average Protein Length": "277.2",
        "Coding Ratio (%)": "90.8",
        "Number of rRNAs": "3",
        "Number of tRNAs": "44",
        "Number of CRISPRs": "3"
    },
    "has_analysis": true,
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                "organism_name": "Halorubrum halodurans",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
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            {
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
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                "accession": "GCA_000337315.1",
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                "ani_threshold": 95,
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            },
            {
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                "species_taxid": 2743089,
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                "matched_fragments": 54,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Haloferax prahovense",
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                "accession": "GCA_000336815.1",
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                "species_taxid": 381852,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Haloferax gibbonsii",
                "strain": "strain=ATCC 33959",
                "accession": "GCA_000336775.1",
                "taxid": 35746,
                "species_taxid": 35746,
                "relation_to_type": "type",
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                "ani": 75.1946,
                "matched_fragments": 71,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Halogranum rubrum",
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                "accession": "GCA_900114455.1",
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                "species_taxid": 553466,
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                "ani": 75.1442,
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                "ani_threshold": 95,
                "status": "below_threshold"
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        ],
        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Halobacteria;o__Halobacteriales;f__Haloferacaceae;g__Halorubrum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
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            {
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            },
            {
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                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Halobacteria;o__Halobacteriales;f__Haloferacaceae;g__Haloferax",
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                "mean_intra_species_ani": "N/A",
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            },
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        ]
    },
    "_bac2feature": {
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        "genome_size": null,
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        "coding_genes": null,
        "rRNA16S_genes": null,
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        "gram_stain": null,
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        "motility": null,
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        "facultative_respiration": null,
        "anaerobic_respiration": null,
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        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
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        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
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    },
    "_genome_taxon": [
        "Halorutilus",
        "salinus"
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}