{ "type": "genome", "identifier": "GCF_026460945.1", "organism": "Chryseobacterium luquanense", "title": "Chryseobacterium luquanense", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Kunming University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_026460945.1", "bioproject": "PRJNA224116", "biosample": "SAMN31155836", "wgs_master": "JAOVZV000000000.1", "refseq_category": "reference genome", "taxid": "2983766", "species_taxid": "2983766", "organism_name": "Chryseobacterium luquanense", "infraspecific_name": "strain=KC 927", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/11/28", "asm_name": "ASM2646094v1", "asm_submitter": "Kunming University", "gbrs_paired_asm": "GCA_026460945.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/026/460/945/GCF_026460945.1_ASM2646094v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4347779", "genome_size_ungapped": "4347779", "gc_percent": "33.500000", "replicon_count": "0", "scaffold_count": "53", "contig_count": "53", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_026460945.1-RS_2024_09_23", "annotation_date": "2024-09-23", "total_gene_count": "4098", "protein_coding_gene_count": "3988", "non_coding_gene_count": "77", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-11-28", "dateModified": "2022-11-28", "datePublished": "2022-11-28", "_annotation": { "sample_count": 1, "sample_organism": [ "Chryseobacterium luquanense" ], "sample_taxid": [ "2983766" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Yunnan, Jiaozi Mountain" ], "sample_host_location_id": [], "data_size": "1.206 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4347779", "Number of Sequences": "53", "Longest Sequences (bp)": "771752", "N50 (bp)": "325684", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "33.5", "Number of CDSs": "3978", "Average Protein Length": "315.7", "Coding Ratio (%)": "86.7", "Number of rRNAs": "3", "Number of tRNAs": "72", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Chryseobacterium scophthalmum", "strain": "strain=DSM 16779", "accession": "GCA_900143185.1", "taxid": 59733, "species_taxid": 59733, "relation_to_type": "type", "validated": true, "ani": 84.5305, "matched_fragments": 1002, "total_fragments": 1428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chryseobacterium mulctrae", "strain": "strain=CA10", "accession": "GCA_006175945.1", "taxid": 2576777, "species_taxid": 2576777, "relation_to_type": "type", "validated": true, "ani": 84.4586, "matched_fragments": 981, "total_fragments": 1428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chryseobacterium balustinum", "strain": "strain=DSM 16775", "accession": "GCA_900168205.1", "taxid": 246, "species_taxid": 246, "relation_to_type": "type", "validated": true, "ani": 84.4245, "matched_fragments": 984, "total_fragments": 1428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chryseobacterium piscium", "strain": "strain=CCUG 51923", "accession": "GCA_003385415.1", "taxid": 333702, "species_taxid": 333702, "relation_to_type": "type", "validated": true, "ani": 84.3632, "matched_fragments": 952, "total_fragments": 1428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chryseobacterium balustinum", "strain": "strain=NCTC11212", "accession": "GCA_900446785.1", "taxid": 246, "species_taxid": 246, "relation_to_type": "type", "validated": true, "ani": 84.3504, "matched_fragments": 933, "total_fragments": 1428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chryseobacterium formosense", "strain": "strain=DSM 17452", "accession": "GCA_900116415.1", "taxid": 236814, "species_taxid": 236814, "relation_to_type": "type", "validated": true, "ani": 84.2676, "matched_fragments": 1011, "total_fragments": 1428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chryseobacterium schmidteae", "strain": "strain=Marseille-P9602", "accession": "GCA_903166575.1", "taxid": 2730404, "species_taxid": 2730404, "relation_to_type": "type", "validated": true, "ani": 84.1055, "matched_fragments": 967, "total_fragments": 1428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chryseobacterium indoltheticum", "strain": "strain=ATCC 27950", "accession": "GCA_900156145.1", "taxid": 254, "species_taxid": 254, "relation_to_type": "type", "validated": true, "ani": 84.0431, "matched_fragments": 962, "total_fragments": 1428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chryseobacterium indoltheticum", "strain": "strain=ATCC 27950", "accession": "GCA_003815915.1", "taxid": 254, "species_taxid": 254, "relation_to_type": "type", "validated": true, "ani": 84.0319, "matched_fragments": 964, "total_fragments": 1428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chryseobacterium caseinilyticum", "strain": "strain=GCR10", "accession": "GCA_014837145.1", "taxid": 2771428, "species_taxid": 2771428, "relation_to_type": "type", "validated": true, "ani": 82.4775, "matched_fragments": 776, "total_fragments": 1428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chryseobacterium piscicola", "strain": "strain=DSM 21068", "accession": "GCA_900156685.1", "taxid": 551459, "species_taxid": 551459, "relation_to_type": "type", "validated": true, "ani": 81.2657, "matched_fragments": 656, "total_fragments": 1428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chryseobacterium piscicola", "strain": "strain=DSM 21068", "accession": "GCA_002943675.1", "taxid": 551459, "species_taxid": 551459, "relation_to_type": "type", "validated": true, "ani": 81.2592, "matched_fragments": 653, "total_fragments": 1428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chryseobacterium ginsenosidimutans", "strain": "strain=THG 15", "accession": "GCA_024807225.1", "taxid": 687846, "species_taxid": 687846, "relation_to_type": "type", "validated": true, "ani": 81.0975, "matched_fragments": 797, "total_fragments": 1428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chryseobacterium gwangjuense", "strain": 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