{ "type": "genome", "identifier": "GCF_026625145.1", "organism": "Lacinutrix neustonica", "title": "Lacinutrix neustonica", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Seoul National University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_026625145.1", "bioproject": "PRJNA224116", "biosample": "SAMN30942755", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "2980107", "species_taxid": "2980107", "organism_name": "Lacinutrix neustonica", "infraspecific_name": "strain=HL-RS19", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/12/04", "asm_name": "ASM2662514v1", "asm_submitter": "Seoul National University", "gbrs_paired_asm": "GCA_026625145.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/026/625/145/GCF_026625145.1_ASM2662514v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3905328", "genome_size_ungapped": "3905328", "gc_percent": "35.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_026625145.1-RS_2024_10_11", "annotation_date": "2024-10-11", "total_gene_count": "4401", "protein_coding_gene_count": "3495", "non_coding_gene_count": "54", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-12-04", "dateModified": "2022-12-04", "datePublished": "2022-12-04", "_annotation": { "sample_count": 1, "sample_organism": [ "Lacinutrix neustonica" ], "sample_taxid": [ "2980107" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea" ], 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95, "status": "below_threshold" }, { "organism_name": "Lacinutrix mariniflava", "strain": "strain=AKS432", "accession": "GCA_001418015.1", "taxid": 342955, "species_taxid": 342955, "relation_to_type": "type", "validated": true, "ani": 78.5151, "matched_fragments": 430, "total_fragments": 1301, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lacinutrix algicola", "strain": "strain=AKS293", "accession": "GCA_001418085.1", "taxid": 342954, "species_taxid": 342954, "relation_to_type": "type", "validated": true, "ani": 78.4302, "matched_fragments": 426, "total_fragments": 1301, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Olleya aquimaris", "strain": "strain=DSM 24464", "accession": "GCA_003259525.1", "taxid": 639310, "species_taxid": 639310, "relation_to_type": "type", "validated": true, "ani": 78.0957, "matched_fragments": 319, "total_fragments": 1301, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bizionia 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zeaxanthinifaciens", "strain": "strain=DSM 18436", "accession": "GCA_000422365.1", "taxid": 393060, "species_taxid": 393060, "relation_to_type": "type", "validated": true, "ani": 77.5862, "matched_fragments": 283, "total_fragments": 1301, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella undariae", "strain": "strain=CCUG 63832", "accession": "GCA_013285155.1", "taxid": 1285465, "species_taxid": 1285465, "relation_to_type": "type", "validated": true, "ani": 77.5709, "matched_fragments": 221, "total_fragments": 1301, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavivirga eckloniae", "strain": "strain=ECD14", "accession": "GCA_002886045.1", "taxid": 1803846, "species_taxid": 1803846, "relation_to_type": "type", "validated": true, "ani": 77.5516, "matched_fragments": 189, "total_fragments": 1301, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algibacter amylolyticus", "strain": "strain=RU-4-M-4", "accession": "GCA_007559325.1", "taxid": 1608400, "species_taxid": 1608400, "relation_to_type": "type", "validated": true, "ani": 77.5396, "matched_fragments": 235, "total_fragments": 1301, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Olleya namhaensis", "strain": "strain=DSM 28881", "accession": "GCA_900114005.1", "taxid": 1144750, "species_taxid": 1144750, "relation_to_type": "type", "validated": true, "ani": 77.5067, "matched_fragments": 302, "total_fragments": 1301, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tamlana carrageenivorans", "strain": "strain=UJ94", "accession": "GCA_002893765.1", "taxid": 2069432, "species_taxid": 2069432, "relation_to_type": "type", "validated": true, "ani": 77.4957, "matched_fragments": 193, "total_fragments": 1301, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hanstruepera marina", "strain": "strain=NBU2968", "accession": "GCA_019880635.1", "taxid": 2873265, "species_taxid": 2873265, "relation_to_type": "type", "validated": true, "ani": 77.4692, "matched_fragments": 185, "total_fragments": 1301, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algibacter amylolyticus", "strain": "strain=DSM 29199", "accession": "GCA_014202225.1", "taxid": 1608400, "species_taxid": 1608400, "relation_to_type": "type", "validated": true, "ani": 77.4191, "matched_fragments": 237, "total_fragments": 1301, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesoflavibacter zeaxanthinifaciens subsp. sabulilitoris", "strain": "strain=CECT 8597", "accession": "GCA_014191595.1", "taxid": 1520893, "species_taxid": 393060, "relation_to_type": "type", "validated": true, "ani": 77.4048, "matched_fragments": 273, "total_fragments": 1301, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algibacter marinivivus", "strain": "strain=ZY111", "accession": "GCA_003143755.1", "taxid": 2100723, "species_taxid": 2100723, "relation_to_type": "type", "validated": true, "ani": 77.3718, "matched_fragments": 232, "total_fragments": 1301, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algibacter pectinivorans", "strain": "strain=DSM 25730", "accession": "GCA_900112595.1", "taxid": 870482, "species_taxid": 870482, "relation_to_type": "type", "validated": true, "ani": 77.3434, "matched_fragments": 229, "total_fragments": 1301, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella litoriviva", "strain": "strain=KMM6491", "accession": "GCA_013249065.1", "taxid": 1220182, "species_taxid": 1220182, "relation_to_type": "type", "validated": true, "ani": 77.1791, "matched_fragments": 227, "total_fragments": 1301, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella echinorum", "strain": "strain=KCTC 22026", "accession": "GCA_014284085.1", "taxid": 538189, "species_taxid": 538189, "relation_to_type": "type", 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"total_fragments": 1301, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 87.5, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000934685.1", "gtdb_species": "s__Lacinutrix sp000934685", "ani": 84.6531, "matched_fragments": 950, "total_fragments": 1301, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Lacinutrix", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007827365.1", "gtdb_species": "s__Olleya sp002323495", "ani": 78.9528, "matched_fragments": 338, "total_fragments": 1301, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Olleya", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.78", 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