# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_2	LOCUS_00010	sequence01:340..585(+)	frameshift		528	WP_002286865.1	DUF421 domain-containing protein	75.3	27.5	91.8
MGA_3	LOCUS_00020	sequence01:524..1009(+)	frameshift		528	WP_002286865.1	DUF421 domain-containing protein	98.8	71.6	99.4
MGA_89	LOCUS_00880	sequence01:92975..93172(-)	internal_stop_codon	93236..93238(-),93281..93283(-),93257..93259(-),93266..93268(-)		WP_002287688.1	tyrosine-type recombinase/integrase	100.0	17.1	95.4
MGA_90	LOCUS_00890	sequence01:93764..94204(-)	frameshift,internal_stop_codon	93622..93624(-),93541..93543(-)	93772	WP_002287697.1	hypothetical protein	100.0	56.8	87.0
MGA_94	LOCUS_00930	sequence01:95663..95977(+)	frameshift,internal_stop_codon	95587..95589(+)	95643	WP_007836183.1	DNA adenine methylase	95.2	34.3	44.4
MGA_98	LOCUS_00960	sequence02:992..1327(-)	frameshift		1347	WP_002290383.1	tyrosine-type recombinase/integrase	94.6	55.4	52.4
MGA_99	LOCUS_00970	sequence02:1333..1563(-)	frameshift		1347	WP_011949169.1	site-specific integrase	88.2	35.9	58.2
MGA_100	LOCUS_00980	sequence02:1772..2953(-)	partial			WP_000215932.1	SIR2 family protein	56.2	41.2	26.3
MGA_116	LOCUS_01140	sequence02:19602..20363(-)	partial			WP_002322120.1	DNA internalization-related competence protein ComEC/Rec2	100.0	33.4	99.6
MGA_118	LOCUS_01160	sequence02:21464..21892(-)	partial			WP_002322120.1	DNA internalization-related competence protein ComEC/Rec2	97.9	18.4	99.3
MGA_187	LOCUS_01850	sequence02:96680..96922(+)	frameshift		96614	WP_208930268.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	88.8	53.4	69.0
MGA_190	LOCUS_01880	sequence03:38..310(+)	partial			WP_002288403.1	folate family ECF transporter S component	84.4	42.2	100.0
MGA_327	LOCUS_03250	sequence04:56179..56661(-)	partial			WP_002321621.1	FUSC family protein	100.0	43.2	99.4
MGA_404	LOCUS_04020	sequence05:44613..45227(+)	partial			WP_000160701.1	AAA family ATPase	98.0	74.2	73.6
MGA_430	LOCUS_04280	sequence06:4950..5174(+)	partial			WP_002287661.1	hypothetical protein	67.6	67.6	100.0
MGA_456	LOCUS_04540	sequence06:27860..28102(+)	partial			WP_033582077.1	ribosome silencing factor	100.0	74.8	98.8
MGA_579	LOCUS_05770	sequence08:47953..48693(-)	internal_stop_codon	48826..48828(-)		WP_095443517.1	transglutaminase-like domain-containing protein	94.7	32.6	44.0
MGA_580	LOCUS_05780	sequence08:48826..50124(-)	internal_stop_codon	48826..48828(-)		WP_095443517.1	transglutaminase-like domain-containing protein	100.0	61.0	45.6
MGA_643	LOCUS_06400	sequence10:14581..15246(-)	frameshift		14601	WP_002287227.1	hypothetical protein	96.8	75.6	65.0
MGA_666	LOCUS_06630	sequence10:38770..38997(-)	partial			WP_014748767.1	hypothetical protein	65.3	76.6	95.9
MGA_679	LOCUS_06750	sequence11:10905..12035(+)	internal_stop_codon	12033..12035(+)		WP_002321200.1	helix-turn-helix domain-containing protein	100.0	71.2	99.2
MGA_680	LOCUS_06760	sequence11:12105..12416(+)	frameshift,internal_stop_codon	12033..12035(+)	12404	WP_002321200.1	helix-turn-helix domain-containing protein	98.1	19.1	98.0
MGA_751	LOCUS_07470	sequence11:87890..88270(+)	partial			WP_002294182.1	preprotein translocase subunit YajC	68.3	68.3	96.5
MGA_803	LOCUS_07990	sequence11:137366..138409(+)	partial			WP_011674815.1	hypothetical protein	73.8	68.8	31.8
MGA_804	LOCUS_08000	sequence11:138424..138987(+)	partial			WP_000014003.1	type I restriction-modification system specificity subunit	84.5	34.4	41.2
MGA_806	LOCUS_08020	sequence11:141505..141750(+)	partial			WP_002287735.1	HsdR family type I site-specific deoxyribonuclease	100.0	7.7	96.3
MGA_831	LOCUS_08270	sequence11:169572..169778(-)	internal_stop_codon	169560..169562(-),169545..169547(-),169572..169574(-)		WP_002287594.1	hypothetical protein	100.0	62.4	97.1
MGA_833	LOCUS_08290	sequence11:171596..171724(-)	partial			WP_002287569.1	hypothetical protein	59.5	59.5	100.0
MGA_834	LOCUS_08300	sequence11:171789..171971(+)	partial			WP_002321251.1	hypothetical protein	100.0	73.2	100.0
MGA_958	LOCUS_09540	sequence12:16..390(-)	partial			WP_002288403.1	folate family ECF transporter S component	83.9	57.8	98.1
MGA_991	LOCUS_09870	sequence13:71..1222(-)	partial			WP_002286495.1	hypothetical protein	99.5	55.8	62.5
MGA_1019	LOCUS_10150	sequence13:20162..20395(-)	partial			WP_002399578.1	DUF3850 domain-containing protein	94.8	39.7	71.2
MGA_1030	LOCUS_10260	sequence13:23755..24645(-)	partial			WP_002288329.1	DnaD domain protein	52.7	32.2	34.0
MGA_1041	LOCUS_10370	sequence13:29836..30783(+)	partial			WP_011101077.1	DNA/RNA non-specific endonuclease	20.3	16.3	59.4
MGA_1080	LOCUS_10760	sequence15:3842..4702(-)	frameshift		4739	WP_002292381.1	L-ribulose-5-phosphate 3-epimerase	100.0	57.1	98.6
MGA_1089	LOCUS_10850	sequence15:13175..13342(-)	frameshift,internal_stop_codon	13099..13101(-),13174..13176(-)	13353	WP_002329067.1	cytidine deaminase	100.0	42.4	69.6
MGA_1127	LOCUS_11210	sequence17:11332..11502(-)	frameshift		11516	WP_014748637.1	cysteinyl-tRNA synthetase	100.0	68.3	96.4
MGA_1133	LOCUS_11270	sequence18:52..1128(+)	partial			WP_002286495.1	hypothetical protein	56.4	28.5	65.8
MGA_1135	LOCUS_11290	sequence18:1594..2952(+)	partial			WP_010774225.1	DUF6056 family protein	98.5	73.5	38.7
MGA_1145	LOCUS_11390	sequence18:11217..11372(+)	frameshift,internal_stop_codon	11566..11568(+)	11360	WP_005479611.1	SDR family oxidoreductase	94.1	15.3	50.0
MGA_1146	LOCUS_11400	sequence18:11431..11568(+)	frameshift,internal_stop_codon	11566..11568(+)	11360	WP_005479611.1	SDR family oxidoreductase	97.8	14.0	54.5
MGA_1147	LOCUS_11410	sequence18:11617..12141(+)	frameshift,internal_stop_codon	11566..11568(+)	11360	WP_005479611.1	SDR family oxidoreductase	95.4	53.2	49.7
MGA_1153	LOCUS_11450	sequence19:3937..5709(-)	partial			WP_001083683.1	AAA family ATPase	71.2	69.7	47.4
MGA_1155	LOCUS_11470	sequence19:8987..10222(-)	partial			WP_000794333.1	restriction endonuclease subunit S	48.7	48.6	65.3
MGA_1160	LOCUS_11520	sequence20:2210..2683(+)	partial			WP_002288299.1	PTS fructose transporter subunit IIABC	92.4	22.4	33.8
MGA_1162	LOCUS_11540	sequence20:3030..4121(+)	internal_stop_codon	3009..3011(+)		WP_003245781.1	PTS mannose transporter subunit IIABC	94.5	52.9	40.5
MGA_1165	LOCUS_11570	sequence20:6720..7439(+)	internal_stop_codon	7437..7439(+)		WP_002295818.1	transketolase	100.0	35.9	80.3
MGA_1166	LOCUS_11580	sequence20:7884..8720(+)	partial			WP_002295818.1	transketolase	100.0	41.7	70.9
MGA_1179	LOCUS_11710	sequence21:8880..9134(-)	partial			WP_002359867.1	glycoside hydrolase family 88 protein	100.0	22.1	58.3
MGA_1180	LOCUS_11720	sequence21:9485..9727(-)	internal_stop_codon	9737..9739(-)		WP_002288970.1	DUF2087 domain-containing protein	100.0	82.5	98.8
MGA_1195	LOCUS_11870	sequence22:14995..15207(-)	partial			WP_002296536.1	tyrosine-type recombinase/integrase	67.1	53.4	95.7
MGA_1206	LOCUS_11980	sequence22:23773..24555(+)	internal_stop_codon	24553..24555(+)		WP_002317802.1	choloylglycine hydrolase	100.0	80.2	97.3
MGA_1267	LOCUS_12590	sequence22:87762..88220(+)	partial			WP_000557907.1	5-methylcytosine-specific endonuclease McrA	45.4	25.3	47.1
MGA_1284	LOCUS_12760	sequence22:109051..109173(+)	internal_stop_codon	109171..109173(+)		WP_002312920.1	hypothetical protein	100.0	60.6	100.0
MGA_1300	LOCUS_12920	sequence22:128438..128593(-)	partial			WP_002288488.1	SPJ_0845 family protein	70.6	70.6	100.0
MGA_1318	LOCUS_13100	sequence22:149073..149450(+)	internal_stop_codon	149448..149450(+)		WP_002296412.1	alpha-galactosidase	100.0	16.9	99.2
MGA_1319	LOCUS_13110	sequence22:149460..151298(+)	internal_stop_codon	149448..149450(+)		WP_002296412.1	alpha-galactosidase	100.0	82.6	99.2
MGA_1392	LOCUS_13810	sequence26:169..1977(+)	partial			WP_113849264.1	sigma 54-interacting transcriptional regulator	99.8	66.2	59.2
MGA_1397	LOCUS_13860	sequence26:4992..5417(-)	partial			WP_000703313.1	transcriptional regulator YeiL	89.4	56.5	31.7
MGA_1402	LOCUS_13910	sequence27:56..508(-)	partial			WP_002351560.1	MFS transporter	95.3	34.2	36.4
MGA_1403	LOCUS_13920	sequence27:573..1004(-)	partial			WP_002389992.1	IS30-like element IS6770 family transposase	83.2	37.3	100.0
MGA_1406	LOCUS_13950	sequence27:3465..3647(+)	internal_stop_codon	3645..3647(+)		WP_011476688.1	IS3 family transposase	98.3	19.8	66.1
MGA_1407	LOCUS_13960	sequence27:3732..3971(+)	internal_stop_codon	3645..3647(+),3969..3971(+)		WP_011476688.1	IS3 family transposase	98.7	26.2	61.5
MGA_1416	LOCUS_14050	sequence28:6402..6734(-)	partial			WP_002858308.1	ABC-type lipopolysaccharide transporter PglK	93.6	18.4	46.2
MGA_1418	LOCUS_14060	sequence29:356..889(-)	frameshift		367	WP_141741171.1	IS3 family transposase	98.3	36.4	64.4
MGA_1420	LOCUS_14080	sequence29:1703..1960(+)	partial			WP_126796224.1	recombinase family protein	42.4	18.5	69.4
MGA_1426	LOCUS_14140	sequence30:43..198(-)	partial			WP_002332266.1	DUF5406 family protein	80.4	36.3	100.0
MGA_1439	LOCUS_14270	sequence32:118..582(+)	partial			WP_011862017.1	BglG family transcription antiterminator	96.1	21.3	40.5
MGA_1441	LOCUS_14290	sequence32:891..1142(+)	frameshift		1058	WP_003435758.1	PTS ascorbate transporter subunit IIC	67.5	13.2	71.4
MGA_1442	LOCUS_14300	sequence32:1079..1519(+)	frameshift		1058	WP_003435758.1	PTS ascorbate transporter subunit IIC	98.6	34.0	68.8
MGA_1443	LOCUS_14310	sequence32:1459..2364(-)	partial			WP_002289277.1	MATE family efflux transporter	95.3	62.9	74.2
MGA_1447	LOCUS_14350	sequence32:5060..5485(+)	partial			WP_002295196.1	HAD-IA family hydrolase	85.8	58.5	42.1
MGA_1448	LOCUS_14360	sequence33:728..922(+)	partial			WP_002286302.1	ABC transporter permease	96.9	10.3	88.7
MGA_1464	LOCUS_14520	sequence33:13794..14000(+)	frameshift		13952	WP_000969590.1	Y-family DNA polymerase	69.1	10.7	89.4
MGA_1465	LOCUS_14530	sequence33:13997..14329(+)	frameshift,internal_stop_codon	14538..14540(+)	13952,14288,14306,14444,14447	WP_000969590.1	Y-family DNA polymerase	90.0	22.4	82.8
MGA_1466	LOCUS_14540	sequence33:14304..14474(+)	frameshift,internal_stop_codon	14537..14539(+)	14305,14443,14446,14287	WP_000969590.1	Y-family DNA polymerase	83.9	10.7	89.4
MGA_1533	LOCUS_15210	sequence33:85041..86156(+)	partial			WP_002288087.1	ABC transporter permease	100.0	54.6	98.4
MGA_1552	LOCUS_15400	sequence33:103174..105357(+)	internal_stop_codon	105355..105357(+)		WP_002289453.1	sigma-54-dependent transcriptional regulator	100.0	77.0	99.2
MGA_1553	LOCUS_15410	sequence33:105370..106008(+)	internal_stop_codon	105355..105357(+)		WP_002289453.1	sigma-54-dependent transcriptional regulator	100.0	22.5	98.6
MGA_1584	LOCUS_15720	sequence33:134012..134221(+)	partial			WP_002355902.1	YggT family protein	87.0	70.6	61.7
MGA_1660	LOCUS_16480	sequence34:2825..3553(+)	frameshift		3508	WP_000790944.1	S8 family peptidase	93.0	44.8	28.3
MGA_1661	LOCUS_16490	sequence34:3625..4710(+)	frameshift		3508	WP_011071157.1	S8 family serine peptidase	36.6	15.9	40.6
MGA_1667	LOCUS_16530	sequence36:1174..3657(-)	partial			WP_011339403.1	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	50.7	50.5	36.3
MGA_1671	LOCUS_16560	sequence37:1742..1900(-)	partial			WP_002289113.1	metal-sulfur cluster assembly factor	100.0	45.6	84.6
MGA_1679	LOCUS_16610	sequence40:264..1139(+)	frameshift		1097	WP_003642253.1	Nramp family divalent metal transporter	93.8	51.1	76.9
MGA_1680	LOCUS_16620	sequence40:1175..1870(+)	frameshift		1100	WP_002326755.1	Nramp family divalent metal transporter	99.6	43.6	80.0
MGA_1748	LOCUS_17280	sequence44:67545..67772(+)	partial			WP_002289596.1	hypothetical protein	73.3	73.3	100.0
MGA_1794	LOCUS_17740	sequence44:110720..111241(+)	partial			WP_002296311.1	RDD family protein	89.6	70.8	53.5
MGA_1859	LOCUS_18390	sequence44:180848..181096(+)	frameshift		180839	WP_003565079.1	GNAT family N-acetyltransferase	96.3	50.3	73.4
MGA_1874	LOCUS_18520	sequence46:55..213(-)	partial			WP_002296424.1	hypothetical protein	86.5	71.4	86.7
MGA_1878	LOCUS_18560	sequence47:1001..1291(-)	frameshift		1012	WP_086956687.1	IS3 family transposase	95.8	23.8	100.0
MGA_1879	LOCUS_18570	sequence48:95..835(+)	internal_stop_codon	833..835(+)		WP_081133701.1	IS256-like element ISEfm2 family transposase	100.0	62.8	99.2
MGA_1880	LOCUS_18580	sequence48:968..1273(+)	internal_stop_codon	833..835(+)		WP_002287941.1	IS256-like element ISEfm2 family transposase	100.0	25.8	99.0
MGA_1886	LOCUS_18610	sequence52:360..>1022(-)	partial			WP_002286053.1	SpaH/EbpB family LPXTG-anchored major pilin	100.0	35.2	98.2
MGA_1894	LOCUS_18670	sequence55:5343..5672(+)	frameshift		5299	WP_002296474.1	DUF4809 family protein	100.0	69.9	98.2
MGA_1899	LOCUS_18720	sequence55:9580..10848(+)	internal_stop_codon	10846..10848(+)		WP_002296469.1	hypothetical protein	100.0	51.1	97.2
MGA_1900	LOCUS_18730	sequence55:11104..12060(+)	internal_stop_codon	10846..10848(+)		WP_002296469.1	hypothetical protein	100.0	38.5	100.0
MGA_1988	LOCUS_19610	sequence55:99539..99916(+)	frameshift		99832	WP_002289492.1	YibE/F family protein	78.4	28.6	98.0
MGA_1989	LOCUS_19620	sequence55:99811..100569(+)	frameshift		99832	WP_002289492.1	YibE/F family protein	98.4	72.3	93.5
MGA_1990	LOCUS_19630	sequence55:100566..100889(+)	frameshift		100886	WP_002289493.1	YibE/F family protein	100.0	42.0	83.2
MGA_1991	LOCUS_19640	sequence55:100955..101332(+)	frameshift		100886	WP_002289493.1	YibE/F family protein	100.0	49.0	96.0
MGA_2022	LOCUS_19950	sequence55:135311..135487(+)	partial			WP_002356740.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_2047	LOCUS_20150	sequence66:3096..3242(-)	partial			WP_014748741.1	collagen-binding MSCRAMM adhesin Scm	85.4	6.8	97.6
MGA_2116	LOCUS_20840	sequence66:78610..78786(+)	internal_stop_codon	78784..78786(+)		WP_002287434.1	Veg family protein	100.0	71.6	100.0
MGA_2136	LOCUS_21040	sequence66:101805..102341(-)	internal_stop_codon	102435..102437(-)		WP_002287349.1	hypothetical protein	100.0	69.3	99.4
MGA_2137	LOCUS_21050	sequence66:102435..102578(-)	internal_stop_codon	102435..102437(-)		WP_002287349.1	hypothetical protein	100.0	18.3	100.0
MGA_2155	LOCUS_21230	sequence66:119774..121348(+)	partial			WP_002287386.1	NlpC/P60 family protein	42.2	42.2	93.7
MGA_2175	LOCUS_21410	sequence69:15..>525(-)	partial			WP_000222572.1	IS30 family transposase	100.0	53.3	100.0
MGA_2185	LOCUS_21510	sequence70:5586..6746(+)	internal_stop_codon	6744..6746(+)		WP_002288052.1	peptide MFS transporter	100.0	79.1	97.9
MGA_2186	LOCUS_21520	sequence70:6786..7052(+)	internal_stop_codon	6744..6746(+)		WP_002288052.1	peptide MFS transporter	100.0	18.0	96.6
MGA_2260	LOCUS_22260	sequence70:85741..86565(+)	internal_stop_codon	86563..86565(+)		WP_002288875.1	dihydroorotase	100.0	64.3	100.0
MGA_2261	LOCUS_22270	sequence70:86608..87021(+)	internal_stop_codon	86563..86565(+)		WP_002288875.1	dihydroorotase	100.0	32.2	99.3
MGA_2284	LOCUS_22500	sequence70:111398..112093(-)	internal_stop_codon	112118..112120(-)		WP_002296705.1	helix-turn-helix domain-containing protein	100.0	73.6	96.1
MGA_2285	LOCUS_22510	sequence70:112118..112342(-)	internal_stop_codon	112118..112120(-)		WP_002296705.1	helix-turn-helix domain-containing protein	100.0	23.6	100.0
MGA_2400	LOCUS_23650	sequence71:100883..101785(-)	frameshift		101829	WP_002321675.1	decarboxylating 6-phosphogluconate dehydrogenase	100.0	84.5	100.0
MGA_2412	LOCUS_23770	sequence71:112657..112902(-)	frameshift		112960	WP_002289425.1	PTS glucitol/sorbitol transporter subunit IIB	100.0	24.5	98.8
MGA_2413	LOCUS_23780	sequence71:112907..113653(-)	frameshift		112960	WP_002289425.1	PTS glucitol/sorbitol transporter subunit IIB	93.1	69.8	97.8
MGA_2416	LOCUS_23810	sequence71:114697..115047(-)	frameshift		115160	WP_002289421.1	HTH domain-containing protein	100.0	18.6	98.3
MGA_2417	LOCUS_23820	sequence71:115152..115373(-)	frameshift		115432,115159	WP_002289421.1	HTH domain-containing protein	97.3	11.4	98.6
MGA_2418	LOCUS_23830	sequence71:115409..116563(-)	frameshift		115435,115165	WP_002289421.1	HTH domain-containing protein	100.0	61.7	98.2
MGA_2422	LOCUS_23870	sequence72:1..640(+)	partial			WP_002286052.1	class C sortase	86.8	65.7	75.0
MGA_2424	LOCUS_23890	sequence72:3839..4177(+)	frameshift		4153	WP_002296200.1	DUF1430 domain-containing protein	90.2	15.3	100.0
MGA_2425	LOCUS_23900	sequence72:4228..4824(+)	frameshift,internal_stop_codon	4823..4825(+)	4153	WP_002296200.1	DUF1430 domain-containing protein	100.0	30.0	82.3
MGA_2426	LOCUS_23910	sequence72:4858..5832(+)	internal_stop_codon	4822..4824(+)		WP_002296200.1	DUF1430 domain-containing protein	100.0	49.1	87.3
MGA_2443	LOCUS_24080	sequence72:24071..24559(+)	partial			WP_002323374.1	PTS fructose transporter subunit IIC	99.4	44.1	90.7
MGA_2444	LOCUS_24090	sequence72:24741..24899(+)	frameshift,internal_stop_codon	24594..24596(+),24898..24900(+),24706..24708(+)	24620,24765	WP_067485285.1	D-lyxose/D-mannose family sugar isomerase	96.2	29.8	56.0
