{
    "type": "genome",
    "identifier": "GCF_027568575.1",
    "organism": "Caldifermentibacillus hisashii",
    "title": "Caldifermentibacillus hisashii",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "American University of Nigeria",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_027568575.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN30486841",
        "wgs_master": "JANUVP000000000.1",
        "refseq_category": "na",
        "taxid": "996558",
        "species_taxid": "996558",
        "organism_name": "Caldifermentibacillus hisashii",
        "infraspecific_name": "strain=N-11",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/01/03",
        "asm_name": "ASM2756857v1",
        "asm_submitter": "American University of Nigeria",
        "gbrs_paired_asm": "GCA_027568575.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/027/568/575/GCF_027568575.1_ASM2756857v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4119224",
        "genome_size_ungapped": "4119224",
        "gc_percent": "37.000000",
        "replicon_count": "0",
        "scaffold_count": "197",
        "contig_count": "197",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_027568575.1-RS_2024_12_16",
        "annotation_date": "2024-12-16",
        "total_gene_count": "4049",
        "protein_coding_gene_count": "3855",
        "non_coding_gene_count": "93",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-01-03",
    "dateModified": "2023-01-03",
    "datePublished": "2023-01-03",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Caldifermentibacillus hisashii"
        ],
        "sample_taxid": [
            "996558"
        ],
        "sample_host_organism": [
            "Gnotobiotic mice"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Japan: Ohita"
        ],
        "sample_host_location_id": [],
        "data_size": "1.169 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4119224",
        "Number of Sequences": "197",
        "Longest Sequences (bp)": "347383",
        "N50 (bp)": "73346",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "37.1",
        "Number of CDSs": "3808",
        "Average Protein Length": "285.2",
        "Coding Ratio (%)": "79.1",
        "Number of rRNAs": "2",
        "Number of tRNAs": "72",
        "Number of CRISPRs": "8"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Bacillus andreraoultii",
                "strain": "strain=SIT1",
                "accession": "GCA_001244735.1",
                "taxid": 1499685,
                "species_taxid": 1499685,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.9167,
                "matched_fragments": 350,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus massilionigeriensis",
                "strain": "strain=Marseille-P2384",
                "accession": "GCA_900117315.1",
                "taxid": 1805475,
                "species_taxid": 1805475,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.3077,
                "matched_fragments": 64,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Caldibacillus pasinlerensis",
                "strain": "strain=P1",
                "accession": "GCA_009996845.1",
                "taxid": 2703818,
                "species_taxid": 2703818,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2332,
                "matched_fragments": 175,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus tepidiphilus",
                "strain": "strain=SYSU G01002",
                "accession": "GCA_009466385.1",
                "taxid": 2652445,
                "species_taxid": 2652445,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8588,
                "matched_fragments": 52,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Neobacillus dielmonensis",
                "strain": "strain=FF4",
                "accession": "GCA_000612665.1",
                "taxid": 1347369,
                "species_taxid": 1347369,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.746,
                "matched_fragments": 59,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Neobacillus jeddahensis",
                "strain": "strain=JCE",
                "accession": "GCA_000612625.1",
                "taxid": 1461580,
                "species_taxid": 1461580,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4053,
                "matched_fragments": 61,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Niallia circulans",
                "strain": "strain=NBRC 13626",
                "accession": "GCA_001591585.1",
                "taxid": 1397,
                "species_taxid": 1397,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.3768,
                "matched_fragments": 75,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Neobacillus novalis",
                "strain": "strain=FJAT-14227",
                "accession": "GCA_001636395.1",
                "taxid": 220687,
                "species_taxid": 220687,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3724,
                "matched_fragments": 62,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Neobacillus mesonae",
                "strain": "strain=FJAT-13985",
                "accession": "GCA_001636315.1",
                "taxid": 1193713,
                "species_taxid": 1193713,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2994,
                "matched_fragments": 61,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Neobacillus massiliamazoniensis",
                "strain": "strain=LF1",
                "accession": "GCA_001048695.1",
                "taxid": 1499688,
                "species_taxid": 1499688,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2814,
                "matched_fragments": 68,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anoxybacillus calidus",
                "strain": "strain=DSM 25220",
                "accession": "GCA_013760845.1",
                "taxid": 575178,
                "species_taxid": 575178,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0514,
                "matched_fragments": 55,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Neobacillus novalis",
                "strain": "strain=NBRC 102450",
                "accession": "GCA_001591805.1",
                "taxid": 220687,
                "species_taxid": 220687,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8994,
                "matched_fragments": 60,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Calidifontibacillus erzurumensis",
                "strain": "strain=P2",
                "accession": "GCA_013303125.1",
                "taxid": 2741433,
                "species_taxid": 2741433,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8528,
                "matched_fragments": 70,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_000751775.1",
                "gtdb_species": "s__Bacillus_J thermoamylovorans",
                "ani": 98.615,
                "matched_fragments": 1041,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__DSM-16016;f__Caldibacillaceae;g__Bacillus_J",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.31",
                "min_intra_species_ani": "97.86",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 9,
                "status": "conclusive"
            },
            {
                "accession": "GCF_001244735.1",
                "gtdb_species": "s__Bacillus_J andreraoultii",
                "ani": 78.9009,
                "matched_fragments": 350,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__DSM-16016;f__Caldibacillaceae;g__Bacillus_J",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCF_900117315.1",
                "gtdb_species": "s__Bacillus_BE massilionigeriensis",
                "ani": 77.3486,
                "matched_fragments": 63,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Bacillus_BE",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_902796085.1",
                "gtdb_species": "s__RUG14133 sp902796085",
                "ani": 77.3317,
                "matched_fragments": 131,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__DSM-16016;f__Caldibacillaceae;g__RUG14133",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_009466385.1",
                "gtdb_species": "s__Bacillus_BN tepidiphilus",
                "ani": 76.8984,
                "matched_fragments": 51,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-1321;g__Bacillus_BN",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_016879755.1",
                "gtdb_species": "s__Bacillus_AZ sp016879755",
                "ani": 76.7044,
                "matched_fragments": 59,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Bacillus_AZ",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_018343715.1",
                "gtdb_species": "s__FJAT-49711 sp018343715",
                "ani": 76.6788,
                "matched_fragments": 55,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_C;g__FJAT-49711",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_902829255.1",
                "gtdb_species": "s__Metabacillus niabensis",
                "ani": 76.628,
                "matched_fragments": 57,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Metabacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.58",
                "min_intra_species_ani": "98.41",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_003726095.1",
                "gtdb_species": "s__Niallia circulans_A",
                "ani": 76.5944,
                "matched_fragments": 78,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Niallia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.27",
                "min_intra_species_ani": "98.85",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 8,
                "status": "-"
            },
            {
                "accession": "GCF_002860255.1",
                "gtdb_species": "s__Neobacillus cucumis_A",
                "ani": 76.4142,
                "matched_fragments": 59,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Neobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000612625.1",
                "gtdb_species": "s__Neobacillus jeddahensis",
                "ani": 76.4053,
                "matched_fragments": 61,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Neobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_001591585.1",
                "gtdb_species": "s__Niallia circulans",
                "ani": 76.403,
                "matched_fragments": 74,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Niallia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.18",
                "min_intra_species_ani": "98.58",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 9,
                "status": "-"
            },
            {
                "accession": "GCF_001636345.1",
                "gtdb_species": "s__Cytobacillus gottheilii",
                "ani": 76.3684,
                "matched_fragments": 63,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Cytobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.50",
                "min_intra_species_ani": "95.11",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_002860165.1",
                "gtdb_species": "s__Bacillus_BJ sp002860165",
                "ani": 76.205,
                "matched_fragments": 51,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Bacillus_BJ",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017898095.1",
                "gtdb_species": "s__JAGKQJ01 sp017898095",
                "ani": 76.1057,
                "matched_fragments": 69,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__JAGKQJ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_013760845.1",
                "gtdb_species": "s__Anoxybacillus_B calidus",
                "ani": 76.0514,
                "matched_fragments": 55,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Anoxybacillaceae;g__Anoxybacillus_B",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_016107705.1",
                "gtdb_species": "s__Neobacillus cucumis_B",
                "ani": 75.8605,
                "matched_fragments": 61,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Neobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_genome_taxon": [
        "Caldifermentibacillus",
        "hisashii"
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}