{ "type": "genome", "identifier": "GCF_027923545.1", "organism": "Sinisalibacter aestuarii", "title": "Sinisalibacter aestuarii", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Laboratory of Applied Microbiology Course of Applied Marine Biosciences, Tokyo University of Marine Science and Technology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_027923545.1", "bioproject": "PRJNA224116", "biosample": "SAMD00494762", "wgs_master": "BROH00000000.1", "refseq_category": "reference genome", "taxid": "2949426", "species_taxid": "2949426", "organism_name": "Sinisalibacter aestuarii", "infraspecific_name": "strain=B-399", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/11/05", "asm_name": "ASM2792354v1", "asm_submitter": "Laboratory of Applied Microbiology Course of Applied Marine Biosciences, Tokyo University of Marine Science and Technology", "gbrs_paired_asm": "GCA_027923545.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/027/923/545/GCF_027923545.1_ASM2792354v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4116456", "genome_size_ungapped": "4116456", "gc_percent": "65.000000", "replicon_count": "0", "scaffold_count": "50", "contig_count": "50", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_027923545.1-RS_2024_06_30", "annotation_date": "2024-06-30", "total_gene_count": "4193", "protein_coding_gene_count": "4074", "non_coding_gene_count": "51", "pubmed_id": "37578835" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-11-05", "dateModified": "2022-11-05", "datePublished": "2022-11-05", "_annotation": { "sample_count": 1, "sample_organism": [ "Sinisalibacter aestuarii" ], "sample_taxid": [ "2949426" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Japan:Tokyo, esutuary of the Arakawa River" ], "sample_host_location_id": [], "data_size": "1.131 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4115594", "Number of Sequences": "44", "Longest Sequences (bp)": "979334", "N50 (bp)": "245793", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "65.2", "Number of CDSs": "4115", "Average Protein Length": "300.4", "Coding Ratio (%)": "90.1", "Number of rRNAs": "3", "Number of tRNAs": "45", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Thioclava atlantica", "strain": 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