# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_2	LOCUS_00010	sequence1:672..1235(+)	internal_stop_codon	603..605(+),1233..1235(+),648..650(+)		WP_039275826.1	chromosomal replication initiator protein DnaA	100.0	40.7	34.0
MGA_7	LOCUS_00060	sequence1:5143..5523(+)	internal_stop_codon	5521..5523(+),5584..5586(+)		WP_010874497.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	95.2	38.6	43.2
MGA_8	LOCUS_00070	sequence1:5854..6126(+)	internal_stop_codon	5815..5817(+)		WP_067207610.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	90.0	24.8	43.2
MGA_9	LOCUS_00080	sequence1:6119..6493(+)	internal_stop_codon	6554..6556(+),6491..6493(+)		WP_010874497.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	93.5	36.4	56.7
MGA_15	LOCUS_00140	sequence1:12072..12818(+)	partial			WP_010874477.1	nucleotide exchange factor GrpE	62.1	71.0	31.4
MGA_17	LOCUS_00160	sequence1:12988..13638(+)	internal_stop_codon	13636..13638(+),12985..12987(+),13780..13782(+)		WP_003227570.1	arginine--tRNA ligase	96.3	38.1	40.2
MGA_18	LOCUS_00170	sequence1:13909..14406(+)	internal_stop_codon	13636..13638(+),13780..13782(+)		WP_003723609.1	arginine--tRNA ligase	100.0	31.3	35.6
MGA_19	LOCUS_00180	sequence1:14846..15232(+)	internal_stop_codon	15230..15232(+),14765..14767(+)		WP_002290335.1	fructose-bisphosphate aldolase	98.4	43.6	56.3
MGA_20	LOCUS_00190	sequence1:15547..15885(+)	internal_stop_codon	15883..15885(+)		WP_011016843.1	RluA family pseudouridine synthase	92.9	38.4	36.3
MGA_21	LOCUS_00200	sequence1:15919..16386(+)	internal_stop_codon	15883..15885(+)		WP_011166934.1	RluA family pseudouridine synthase	98.7	54.0	33.7
MGA_23	LOCUS_00220	sequence1:16781..17317(+)	internal_stop_codon	17315..17317(+)		WP_011183059.1	amidase family protein	91.0	34.4	47.6
MGA_26	LOCUS_00250	sequence1:18090..19046(+)	internal_stop_codon	19077..19079(+),19044..19046(+)		WP_015545356.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	97.5	66.6	50.5
MGA_32	LOCUS_00310	sequence1:26825..27466(+)	partial			WP_003243775.1	DNA-binding protein WhiA	51.2	33.9	32.1
MGA_34	LOCUS_00330	sequence1:28511..28672(+)	internal_stop_codon	28904..28906(+),28670..28672(+),28862..28864(+)		WP_001047373.1	inorganic diphosphatase	88.7	27.2	57.4
MGA_39	LOCUS_00380	sequence1:32345..32623(+)	internal_stop_codon	32621..32623(+),32264..32266(+),32327..32329(+),32801..32803(+)		WP_003723915.1	ABC transporter permease	87.0	22.9	35.0
MGA_45	LOCUS_00440	sequence1:36156..36830(+)	internal_stop_codon	36969..36971(+),36834..36836(+),36828..36830(+)		WP_010874564.1	PTS transporter subunit IIABC	97.3	22.9	36.5
MGA_46	LOCUS_00450	sequence1:37200..37493(+)	internal_stop_codon	37635..37637(+),37014..37016(+),36969..36971(+),37491..37493(+)		WP_011183111.1	PTS transporter subunit EIIC	84.5	11.6	52.4
MGA_47	LOCUS_00460	sequence1:38007..38636(+)	partial			WP_001227709.1	glucose-specific PTS transporter subunit IIBC	89.5	27.0	34.7
MGA_53	LOCUS_00520	sequence1:41498..41878(+)	partial			WP_042733551.1	IS3 family transposase	83.3	25.4	34.3
MGA_56	LOCUS_00550	sequence1:44034..44183(+)	internal_stop_codon	44181..44183(+)		WP_002357780.1	thioredoxin-disulfide reductase	93.9	15.1	67.4
MGA_57	LOCUS_00560	sequence1:44226..44951(+)	internal_stop_codon	44181..44183(+)		WP_011182961.1	thioredoxin-disulfide reductase	100.0	76.8	38.5
MGA_68	LOCUS_00670	sequence1:53904..54395(-)	internal_stop_codon	53904..53906(-),54666..54668(-)		WP_011183317.1	AAA family ATPase	96.9	22.8	58.0
MGA_70	LOCUS_00690	sequence1:54897..55805(-)	internal_stop_codon	54666..54668(-),54897..54899(-)		WP_012546043.1	ATP-dependent chaperone ClpB	98.7	33.9	56.0
MGA_71	LOCUS_00700	sequence1:56000..56320(+)	internal_stop_codon	55994..55996(+),56477..56479(+),56318..56320(+)		WP_005902187.1	triose-phosphate isomerase	74.5	31.9	52.5
MGA_78	LOCUS_00770	sequence1:60323..60661(-)	internal_stop_codon	60323..60325(-),60674..60676(-)		WP_003244672.1	Ktr system potassium transporter KtrD	94.6	21.4	34.0
MGA_79	LOCUS_00780	sequence1:60872..61744(-)	internal_stop_codon	60848..60850(-),60872..60874(-),60674..60676(-)		WP_013447978.1	potassium transporter TrkG	90.3	49.7	37.5
MGA_82	LOCUS_00810	sequence1:63173..63355(+)	internal_stop_codon	63353..63355(+)		WP_008762997.1	polyamine ABC transporter ATP-binding protein	91.7	11.9	56.4
MGA_83	LOCUS_00820	sequence1:63461..64153(+)	internal_stop_codon	64151..64153(+),63353..63355(+)		WP_010874412.1	ATP-binding cassette domain-containing protein	94.3	37.1	48.2
MGA_91	LOCUS_00900	sequence1:67936..68775(+)	partial			WP_011948154.1	cell wall-binding repeat-containing protein	69.2	12.8	28.3
MGA_92	LOCUS_00910	sequence1:69044..69313(-)	partial			WP_011183392.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	96.6	45.7	44.8
MGA_100	LOCUS_00990	sequence1:74072..75700(+)	internal_stop_codon	74060..74062(+),75698..75700(+)		WP_011183185.1	PolC-type DNA polymerase III	100.0	36.8	36.1
MGA_101	LOCUS_01000	sequence1:75788..76354(+)	internal_stop_codon	76352..76354(+),75698..75700(+)		WP_002288497.1	PolC-type DNA polymerase III	100.0	12.1	48.9
MGA_102	LOCUS_01010	sequence1:76436..76969(+)	internal_stop_codon	76352..76354(+),76967..76969(+),77252..77254(+)		WP_011183185.1	PolC-type DNA polymerase III	98.3	11.7	51.1
MGA_108	LOCUS_01070	sequence1:81186..81842(+)	internal_stop_codon	81138..81140(+),81840..81842(+)		WP_000148892.1	glucose-6-phosphate isomerase	100.0	49.4	48.2
MGA_109	LOCUS_01080	sequence1:81918..82295(+)	internal_stop_codon	81840..81842(+)		WP_003243401.1	glucose-6-phosphate isomerase	100.0	27.6	48.8
MGA_116	LOCUS_01150	sequence1:88672..89004(+)	internal_stop_codon	89083..89085(+),89002..89004(+)		WP_011963183.1	uracil-DNA glycosylase	91.8	46.8	48.5
MGA_117	LOCUS_01160	sequence1:89378..89647(+)	internal_stop_codon	89645..89647(+)		WP_002362323.1	M42 family metallopeptidase	83.1	20.6	41.9
MGA_118	LOCUS_01170	sequence1:89768..90448(+)	internal_stop_codon	89645..89647(+)		WP_002456664.1	M42 family metallopeptidase	99.1	63.1	33.0
MGA_120	LOCUS_01190	sequence1:90847..91212(+)	internal_stop_codon	91210..91212(+)		WP_010906062.1	leucine-rich repeat domain-containing protein	71.1	7.9	34.5
MGA_121	LOCUS_01200	sequence1:91728..92657(+)	internal_stop_codon	92655..92657(+)		WP_011183072.1	pyruvate kinase	97.1	62.8	57.7
MGA_122	LOCUS_01210	sequence1:92685..93164(+)	internal_stop_codon	92655..92657(+)		WP_011166458.1	pyruvate kinase	95.0	31.2	44.4
MGA_129	LOCUS_01280	sequence1:99795..100604(-)	internal_stop_codon	99771..99773(-),99795..99797(-),100878..100880(-)		WP_010874361.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	99.6	32.1	42.4
MGA_130	LOCUS_01290	sequence1:100878..101723(-)	internal_stop_codon	100878..100880(-)		WP_002288365.1	DNA gyrase subunit A	84.7	28.9	66.4
MGA_133	LOCUS_01320	sequence1:104100..104546(+)	internal_stop_codon	104085..104087(+),104544..104546(+),104652..104654(+)		WP_000236706.1	ribosome biogenesis GTPase YlqF	100.0	50.7	32.7
MGA_146	LOCUS_01450	sequence1:113681..114121(-)	internal_stop_codon	114188..114190(-)		WP_002261903.1	pseudouridine synthase	95.9	60.9	36.6
MGA_147	LOCUS_01460	sequence1:114188..114379(-)	internal_stop_codon	114188..114190(-)		WP_011227785.1	pseudouridine synthase	96.8	26.0	49.2
MGA_149	LOCUS_01480	sequence1:114781..115359(-)	internal_stop_codon	115432..115434(-),115573..115575(-)		WP_129622721.1	aminotransferase class V-fold PLP-dependent enzyme	93.2	46.8	42.5
MGA_150	LOCUS_01490	sequence1:115573..115926(-)	internal_stop_codon	115432..115434(-),115573..115575(-)		WP_011166685.1	aminotransferase class V-fold PLP-dependent enzyme	82.9	24.5	42.6
MGA_151	LOCUS_01500	sequence1:115919..116320(-)	internal_stop_codon	116447..116449(-)		WP_003358964.1	TlyA family rRNA (cytidine-2'-O)-methyltransferase	96.2	47.3	45.4
MGA_155	LOCUS_01540	sequence1:118057..118458(-)	internal_stop_codon	118675..118677(-)		WP_010905637.1	phosphopentomutase	88.0	27.7	46.3
MGA_156	LOCUS_01550	sequence1:118675..118974(-)	internal_stop_codon	118978..118980(-),118675..118677(-),119104..119106(-)		WP_011071448.1	phosphopentomutase	76.8	18.8	47.4
MGA_158	LOCUS_01570	sequence1:119329..119808(+)	partial			WP_015704147.1	peptidase domain-containing ABC transporter	89.9	19.4	25.9
MGA_160	LOCUS_01590	sequence1:120571..121368(+)	partial			WP_010964866.1	ABC transporter ATP-binding protein	89.8	45.9	28.5
MGA_170	LOCUS_01690	sequence1:128068..128448(-)	partial			WP_042733551.1	IS3 family transposase	83.3	25.4	34.3
MGA_175	LOCUS_01740	sequence1:130474..131307(-)	internal_stop_codon	130474..130476(-)		WP_011073318.1	serine hydroxymethyltransferase	99.3	66.9	61.3
MGA_178	LOCUS_01770	sequence1:132519..132947(+)	internal_stop_codon	132459..132461(+),132945..132947(+)		WP_002485294.1	protein translocase subunit SecDF	95.8	17.8	39.0
MGA_180	LOCUS_01790	sequence1:133560..133919(+)	internal_stop_codon	133512..133514(+)		WP_000418663.1	protein translocase subunit SecF	100.0	35.0	39.5
MGA_181	LOCUS_01800	sequence1:134133..134411(+)	internal_stop_codon	134409..134411(+)		WP_011837670.1	histidine--tRNA ligase	90.2	19.7	45.2
MGA_182	LOCUS_01810	sequence1:134460..134822(+)	internal_stop_codon	134409..134411(+),134820..134822(+)		WP_012583333.1	histidine--tRNA ligase	100.0	28.5	42.5
MGA_183	LOCUS_01820	sequence1:134889..135419(+)	internal_stop_codon	134820..134822(+)		WP_000775873.1	histidine--tRNA ligase	93.8	38.7	33.3
MGA_184	LOCUS_01830	sequence1:135511..136158(+)	internal_stop_codon	135472..135474(+),136156..136158(+)		WP_011183263.1	aspartate--tRNA ligase	98.1	36.9	48.4
MGA_186	LOCUS_01850	sequence1:136783..137124(+)	internal_stop_codon	136651..136653(+),136639..136641(+)		WP_004454140.1	aspartate--tRNA ligase	100.0	19.0	48.7
MGA_205	LOCUS_02040	sequence1:158141..158320(+)	internal_stop_codon	157979..157981(+),158039..158041(+),158015..158017(+),158318..158320(+),158102..158104(+),158081..158083(+)		WP_011167011.1	class 1b ribonucleoside-diphosphate reductase subunit beta	98.3	17.1	86.2
MGA_206	LOCUS_02050	sequence1:158417..158908(+)	internal_stop_codon	158318..158320(+)		WP_011183428.1	class 1b ribonucleoside-diphosphate reductase subunit beta	100.0	47.9	81.6
MGA_208	LOCUS_02070	sequence1:159366..159647(+)	internal_stop_codon	159645..159647(+)		WP_010874680.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	100.0	12.5	45.7
MGA_209	LOCUS_02080	sequence1:159675..161075(+)	internal_stop_codon	161073..161075(+),159645..159647(+)		WP_010874680.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	100.0	64.6	69.1
MGA_210	LOCUS_02090	sequence1:161127..161528(+)	internal_stop_codon	161073..161075(+)		WP_010874680.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	100.0	19.0	74.5
MGA_213	LOCUS_02120	sequence1:164246..164521(-)	frameshift,internal_stop_codon	164245..164247(-),164191..164193(-)	164541	WP_000280824.1	lipoate--protein ligase	100.0	26.8	48.4
MGA_214	LOCUS_02130	sequence1:164952..165383(-)	internal_stop_codon	165597..165599(-),165585..165587(-)		WP_001191954.1	NAD-dependent deacetylase	94.4	43.0	45.2
MGA_215	LOCUS_02140	sequence1:165597..165815(-)	internal_stop_codon	165597..165599(-),165585..165587(-)		WP_010922343.1	NAD-dependent deacetylase	86.1	21.2	56.5
MGA_216	LOCUS_02150	sequence1:165853..166128(-)	internal_stop_codon	165853..165855(-)		WP_000717324.1	glycine cleavage system protein H	100.0	82.7	52.7
MGA_221	LOCUS_02200	sequence1:169825..171528(+)	partial			WP_007054447.1	ABC transporter ATP-binding protein/permease	52.2	30.6	28.1
MGA_228	LOCUS_02270	sequence1:176581..176799(-)	internal_stop_codon	176845..176847(-)		WP_011166818.1	class II fructose-bisphosphate aldolase family protein	98.6	25.3	46.5
MGA_229	LOCUS_02280	sequence1:176845..177411(-)	internal_stop_codon	176845..176847(-)		WP_011392146.1	class II fructose-1,6-bisphosphate aldolase	100.0	66.9	37.4
MGA_230	LOCUS_02290	sequence1:177422..177856(-)	internal_stop_codon	177992..177994(-),177920..177922(-),177878..177880(-),178040..178042(-)		WP_011166334.1	PTS transporter subunit EIIC	98.6	22.3	43.0
MGA_231	LOCUS_02300	sequence1:178040..178363(-)	internal_stop_codon	177992..177994(-),178370..178372(-),178040..178042(-),177878..177880(-),177920..177922(-),178526..178528(-)		WP_011166334.1	PTS transporter subunit EIIC	86.0	16.3	48.9
MGA_232	LOCUS_02310	sequence1:178526..178834(-)	internal_stop_codon	178841..178843(-),178526..178528(-),178370..178372(-)		WP_011166334.1	PTS transporter subunit EIIC	100.0	19.4	57.4
MGA_233	LOCUS_02320	sequence1:178841..179203(-)	internal_stop_codon	178841..178843(-)		WP_011166334.1	PTS transporter subunit EIIC	88.3	19.2	67.3
MGA_235	LOCUS_02340	sequence1:181291..181752(+)	internal_stop_codon	181933..181935(+),181750..181752(+)		WP_003021391.1	N-acetylglucosamine-6-phosphate deacetylase	86.9	35.5	35.3
MGA_241	LOCUS_02400	sequence1:185879..187297(-)	partial			WP_010874641.1	P80 family lipoprotein	57.4	34.6	24.2
MGA_245	LOCUS_02440	sequence1:190140..191486(-)	internal_stop_codon	190140..190142(-)		WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	96.2	67.9	49.5
MGA_246	LOCUS_02450	sequence1:191781..191900(-)	internal_stop_codon	191781..191783(-)		WP_003891333.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	94.9	5.5	70.3
MGA_252	LOCUS_02510	sequence1:196423..196956(-)	internal_stop_codon	196999..197001(-)		WP_004398870.1	DNA polymerase I	64.4	13.2	41.4
MGA_255	LOCUS_02540	sequence1:197760..198407(-)	internal_stop_codon	198480..198482(-)		WP_002658074.1	DNA polymerase III subunit alpha	100.0	18.4	42.0
MGA_256	LOCUS_02550	sequence1:198480..199265(-)	internal_stop_codon	199410..199412(-),198480..198482(-)		WP_003229412.1	DNA polymerase III subunit alpha	99.6	22.7	40.7
MGA_258	LOCUS_02570	sequence1:199692..200270(-)	internal_stop_codon	199410..199412(-)		WP_003229412.1	DNA polymerase III subunit alpha	63.0	11.7	32.8
MGA_262	LOCUS_02610	sequence1:201441..201914(+)	partial			WP_042733551.1	IS3 family transposase	72.6	28.4	33.1
MGA_266	LOCUS_02650	sequence1:202853..203326(+)	partial			WP_042733551.1	IS3 family transposase	72.6	28.4	32.2
MGA_267	LOCUS_02660	sequence1:203912..204103(-)	internal_stop_codon	203912..203914(-)		WP_010964019.1	tRNA (cytidine(34)-2'-O)-methyltransferase	71.4	28.1	66.7
MGA_270	LOCUS_02690	sequence1:205043..205282(-)	internal_stop_codon	205043..205045(-),205493..205495(-),205400..205402(-),205346..205348(-)		WP_011166335.1	glutamate--tRNA ligase	100.0	16.4	62.0
MGA_271	LOCUS_02700	sequence1:205493..205894(-)	internal_stop_codon	205493..205495(-),205400..205402(-),205346..205348(-)		WP_003700687.1	glutamate--tRNA ligase	92.5	24.8	61.0
MGA_272	LOCUS_02710	sequence1:206073..206642(-)	partial			WP_010905456.1	peptide chain release factor N(5)-glutamine methyltransferase	100.0	71.1	38.6
MGA_273	LOCUS_02720	sequence1:206650..207150(-)	internal_stop_codon	207313..207315(-)		WP_011166352.1	peptide chain release factor 1	96.4	44.2	58.0
MGA_274	LOCUS_02730	sequence1:207313..207735(-)	internal_stop_codon	207313..207315(-)		WP_003546735.1	peptide chain release factor 1	97.9	38.0	43.8
MGA_281	LOCUS_02800	sequence1:213542..213790(-)	internal_stop_codon	214001..214003(-),213377..213379(-),213887..213889(-),213356..213358(-),213542..213544(-),213842..213844(-),214043..214045(-),213383..213385(-)		WP_011166327.1	MFS transporter	85.4	15.7	50.0
MGA_284	LOCUS_02830	sequence1:216400..216864(+)	internal_stop_codon	216862..216864(+)		WP_011166713.1	alpha/beta hydrolase	79.9	45.5	47.6
MGA_285	LOCUS_02840	sequence1:216943..217164(+)	internal_stop_codon	216862..216864(+)		WP_011166712.1	alpha/beta hydrolase	93.2	25.9	47.1
MGA_289	LOCUS_02880	sequence1:220075..220236(+)	internal_stop_codon	220483..220485(+),220234..220236(+),220327..220329(+),220501..220503(+)		WP_010874664.1	APC family permease	83.0	7.8	61.4
MGA_290	LOCUS_02890	sequence1:220513..221070(+)	internal_stop_codon	220234..220236(+),220501..220503(+),221128..221130(+),220327..220329(+),220483..220485(+),221068..221070(+),221308..221310(+)		WP_010874664.1	APC family permease	100.0	34.7	35.4
MGA_293	LOCUS_02920	sequence1:222328..222633(+)	internal_stop_codon	222631..222633(+),222706..222708(+)		WP_010874749.1	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	63.4	17.9	51.6
MGA_294	LOCUS_02930	sequence1:223707..224456(+)	internal_stop_codon	223626..223628(+),223545..223547(+)		WP_011182937.1	alpha-ketoacid dehydrogenase subunit beta	99.6	74.8	59.3
MGA_296	LOCUS_02950	sequence1:227036..227416(-)	partial			WP_042733551.1	IS3 family transposase	83.3	25.4	34.3
MGA_300	LOCUS_02990	sequence1:228709..228873(-)	partial			WP_000411056.1	Xaa-Pro dipeptidase	90.7	13.9	57.1
MGA_305	LOCUS_03040	sequence1:234001..234849(-)	internal_stop_codon	235000..235002(-),234001..234003(-)		WP_004083057.1	heavy metal translocating P-type ATPase	99.3	37.3	30.6
MGA_306	LOCUS_03050	sequence1:235000..235518(-)	internal_stop_codon	235000..235002(-)		WP_011016257.1	heavy metal translocating P-type ATPase	97.1	21.7	28.1
MGA_308	LOCUS_03070	sequence1:236206..236601(-)	partial			WP_003131091.1	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	86.3	50.4	39.2
MGA_312	LOCUS_03110	sequence1:238558..239091(+)	partial			WP_003435866.1	TatD family hydrolase	98.9	65.6	37.5
MGA_317	LOCUS_03160	sequence1:242275..242736(-)	partial			WP_009873587.1	L-threonylcarbamoyladenylate synthase	76.5	46.3	28.5
MGA_318	LOCUS_03170	sequence1:243061..244068(-)	partial			WP_001829601.1	excinuclease ABC subunit UvrB	98.2	50.2	48.8
MGA_319	LOCUS_03180	sequence1:244423..245055(-)	internal_stop_codon	244423..244425(-)		WP_012028187.1	excinuclease ABC subunit UvrB	100.0	31.8	55.7
MGA_326	LOCUS_03250	sequence1:250265..250573(-)	internal_stop_codon	250265..250267(-)		WP_010725220.1	Holliday junction branch migration protein RuvA	84.3	46.0	35.1
MGA_329	LOCUS_03280	sequence1:252398..252565(-)	partial			WP_004599479.1	DNA helicase PcrA	72.7	6.1	62.5
MGA_331	LOCUS_03300	sequence1:253697..254365(-)	internal_stop_codon	253697..253699(-),253559..253561(-)		WP_003644128.1	DNA helicase PcrA	98.2	27.3	38.1
MGA_333	LOCUS_03320	sequence1:255026..255160(-)	internal_stop_codon	255170..255172(-)		WP_003430444.1	asparagine--tRNA ligase	93.2	8.8	70.7
MGA_334	LOCUS_03330	sequence1:255170..256270(-)	internal_stop_codon	255170..255172(-),256301..256303(-)		WP_011462263.1	asparagine--tRNA ligase	99.5	81.4	47.0
MGA_335	LOCUS_03340	sequence1:257318..258583(-)	frameshift		257887,257947,258614,258639	WP_170127867.1	IS1634 family transposase	94.1	73.7	42.1
MGA_338	LOCUS_03370	sequence1:260539..261417(-)	internal_stop_codon	260338..260340(-),260539..260541(-)		WP_011167113.1	ABC transporter substrate-binding protein	74.3	21.8	33.6
MGA_344	LOCUS_03430	sequence1:265257..266288(-)	partial			WP_011167112.1	PDxFFG protein	98.3	18.8	28.4
MGA_348	LOCUS_03470	sequence1:269408..269641(-)	internal_stop_codon	269657..269659(-)		WP_011167116.1	ABC transporter ATP-binding protein	96.1	15.4	63.5
MGA_349	LOCUS_03480	sequence1:269657..270118(-)	internal_stop_codon	270170..270172(-),269657..269659(-)		WP_011167116.1	ABC transporter ATP-binding protein	100.0	31.8	72.5
MGA_350	LOCUS_03490	sequence1:270170..270355(-)	internal_stop_codon	270170..270172(-)		WP_011167116.1	ABC transporter ATP-binding protein	95.1	12.1	60.3
MGA_352	LOCUS_03510	sequence1:270779..271039(-)	internal_stop_codon	271184..271186(-),271151..271153(-),271094..271096(-)		WP_011167115.1	ABC transporter permease	100.0	25.6	68.6
MGA_354	LOCUS_03530	sequence1:271394..271651(-)	internal_stop_codon	271184..271186(-),271151..271153(-),271382..271384(-),271394..271396(-),271658..271660(-)		WP_011167115.1	ABC transporter permease	81.2	20.5	47.8
MGA_362	LOCUS_03610	sequence1:274082..274462(+)	partial			WP_042733551.1	IS3 family transposase	83.3	25.4	34.3
MGA_364	LOCUS_03630	sequence1:275853..276239(+)	internal_stop_codon	276237..276239(+),276297..276299(+),276429..276431(+)		WP_010905087.1	ATP-binding cassette domain-containing protein	90.6	21.3	57.8
MGA_366	LOCUS_03650	sequence1:277131..277469(+)	internal_stop_codon	276990..276992(+),277068..277070(+)		WP_001830940.1	ATP-binding cassette domain-containing protein	100.0	20.9	49.1
MGA_368	LOCUS_03670	sequence1:278298..278765(+)	internal_stop_codon	278763..278765(+)		WP_002656499.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	89.7	33.4	32.3
MGA_370	LOCUS_03690	sequence1:280448..281218(-)	internal_stop_codon	280247..280249(-),280448..280450(-)		WP_084400767.1	DEAD/DEAH box helicase family protein	95.7	38.9	41.0
MGA_371	LOCUS_03700	sequence1:281607..282110(+)	internal_stop_codon	282108..282110(+)		WP_011017180.1	ROK family protein	92.8	54.3	35.2
MGA_373	LOCUS_03720	sequence1:282729..283283(+)	internal_stop_codon	283281..283283(+)		WP_005694428.1	N-acetylneuraminate lyase	100.0	62.8	48.4
MGA_374	LOCUS_03730	sequence1:283284..283610(+)	internal_stop_codon	283281..283283(+)		WP_011017181.1	N-acetylneuraminate lyase	96.3	35.5	48.1
MGA_376	LOCUS_03750	sequence1:284372..285064(+)	frameshift,internal_stop_codon	284352..284354(+),284222..284224(+),285063..285065(+)	284360,284290	WP_011166740.1	sodium:solute symporter	97.8	38.3	40.7
MGA_378	LOCUS_03770	sequence1:285516..286031(+)	internal_stop_codon	286029..286031(+)		WP_011166737.1	N-acetylmannosamine-6-phosphate 2-epimerase	98.2	73.5	48.2
MGA_381	LOCUS_03800	sequence1:287349..287714(-)	partial			WP_010874783.1	Cof-type HAD-IIB family hydrolase	69.4	31.0	40.0
MGA_382	LOCUS_03810	sequence1:287716..288246(-)	internal_stop_codon	288295..288297(-)		WP_001833056.1	lysine--tRNA ligase	90.9	32.1	60.6
MGA_383	LOCUS_03820	sequence1:288295..289182(-)	internal_stop_codon	288295..288297(-)		WP_003242743.1	lysine--tRNA ligase	96.9	58.5	43.8
MGA_384	LOCUS_03830	sequence1:289267..291513(-)	partial			WP_003733155.1	ATP-dependent zinc metalloprotease FtsH	74.2	81.6	47.3
MGA_386	LOCUS_03850	sequence1:292179..292502(-)	internal_stop_codon	292119..292121(-),292179..292181(-)		WP_010874579.1	tRNA lysidine(34) synthetase TilS	94.4	35.3	40.2
MGA_387	LOCUS_03860	sequence1:292480..292932(-)	internal_stop_codon	292963..292965(-)		WP_010880175.1	aminoacyl-tRNA hydrolase	75.3	60.4	43.1
MGA_390	LOCUS_03890	sequence1:293490..293774(-)	internal_stop_codon	293775..293777(-)		WP_003229795.1	Holliday junction resolvase RuvX	92.6	63.0	35.6
MGA_391	LOCUS_03900	sequence1:293927..295555(-)	internal_stop_codon	295598..295600(-)		WP_011166380.1	alanine--tRNA ligase	93.2	58.4	28.7
MGA_392	LOCUS_03910	sequence1:295598..295903(-)	internal_stop_codon	296084..296086(-),295598..295600(-),295958..295960(-)		WP_011183510.1	alanine--tRNA ligase	97.0	11.2	62.0
MGA_394	LOCUS_03930	sequence1:297032..297313(+)	internal_stop_codon	296987..296989(+),296921..296923(+)		WP_012546112.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	90.3	36.0	39.6
MGA_395	LOCUS_03940	sequence1:297531..297671(+)	internal_stop_codon	297669..297671(+)		WP_011182934.1	FAD-dependent oxidoreductase	100.0	10.2	65.2
MGA_396	LOCUS_03950	sequence1:297735..298628(+)	internal_stop_codon	298626..298628(+),298665..298667(+),297669..297671(+)		WP_011166460.1	FAD-dependent oxidoreductase	96.6	62.8	40.6
MGA_397	LOCUS_03960	sequence1:299110..300234(-)	partial			WP_000283052.1	type I pullulanase	89.6	39.8	23.8
MGA_400	LOCUS_03990	sequence1:302044..302796(+)	internal_stop_codon	302026..302028(+)		WP_003231912.1	transcription termination factor NusA	92.0	59.8	31.6
MGA_403	LOCUS_04020	sequence1:303720..304457(+)	internal_stop_codon	304455..304457(+)		WP_011183192.1	translation initiation factor IF-2	99.6	40.4	55.5
MGA_404	LOCUS_04030	sequence1:304638..305348(+)	internal_stop_codon	304455..304457(+),305346..305348(+)		WP_000036343.1	translation initiation factor IF-2	100.0	35.9	38.2
MGA_405	LOCUS_04040	sequence1:306437..306817(-)	partial			WP_042733551.1	IS3 family transposase	83.3	25.4	34.3
MGA_411	LOCUS_04100	sequence1:309569..310024(+)	partial			WP_010874908.1	YqaJ viral recombinase family protein	74.8	43.8	30.1
MGA_415	LOCUS_04140	sequence1:311221..311538(+)	partial			WP_011228938.1	CinA family nicotinamide mononucleotide deamidase-related protein	96.2	26.4	40.4
MGA_419	LOCUS_04180	sequence1:316384..316833(-)	internal_stop_codon	316945..316947(-)		WP_011393940.1	elongation factor G	96.0	20.5	65.0
MGA_420	LOCUS_04190	sequence1:316945..317118(-)	internal_stop_codon	317155..317157(-),316945..316947(-)		WP_004081841.1	elongation factor G	100.0	8.2	80.7
MGA_421	LOCUS_04200	sequence1:317155..318060(-)	internal_stop_codon	318253..318255(-),318109..318111(-),317155..317157(-),318313..318315(-),316945..316947(-)		WP_011183519.1	elongation factor G	100.0	43.7	60.3
MGA_422	LOCUS_04210	sequence1:318313..318468(-)	internal_stop_codon	318109..318111(-),318313..318315(-),318253..318255(-)		WP_011183519.1	elongation factor G	100.0	7.4	82.4
MGA_423	LOCUS_04220	sequence1:318481..318606(-)	internal_stop_codon	318643..318645(-)		WP_001137495.1	30S ribosomal protein S7	92.7	24.4	78.9
MGA_424	LOCUS_04230	sequence1:318643..318951(-)	internal_stop_codon	318643..318645(-)		WP_001137495.1	30S ribosomal protein S7	100.0	65.4	61.8
MGA_425	LOCUS_04240	sequence1:319001..319345(-)	internal_stop_codon	319370..319372(-)		WP_008362393.1	30S ribosomal protein S12	97.4	79.9	79.3
MGA_431	LOCUS_04300	sequence1:323395..323613(+)	internal_stop_codon	323779..323781(+),323611..323613(+)		WP_015944383.1	TIGR00282 family metallophosphoesterase	93.1	25.9	46.3
MGA_432	LOCUS_04310	sequence1:323893..324192(+)	internal_stop_codon	323779..323781(+),323611..323613(+)		WP_015944383.1	TIGR00282 family metallophosphoesterase	99.0	38.2	46.5
MGA_433	LOCUS_04320	sequence1:324453..325343(-)	internal_stop_codon	324453..324455(-)		WP_011476456.1	redox-regulated ATPase YchF	100.0	80.6	51.0
MGA_434	LOCUS_04330	sequence1:325359..325622(-)	partial			WP_012583715.1	30S ribosomal protein S18	74.7	77.4	63.1
MGA_444	LOCUS_04430	sequence1:331927..332538(-)	internal_stop_codon	332560..332562(-)		WP_011227805.1	elongation factor Tu	100.0	50.0	69.0
MGA_445	LOCUS_04440	sequence1:332560..333135(-)	internal_stop_codon	332560..332562(-)		WP_002289463.1	elongation factor Tu	96.3	46.3	76.1
MGA_446	LOCUS_04450	sequence1:333478..334698(-)	partial			WP_011183303.1	endopeptidase La	99.8	51.5	57.9
MGA_447	LOCUS_04460	sequence1:334981..336105(-)	frameshift,internal_stop_codon	334981..334983(-)	334763	WP_010963778.1	endopeptidase La	60.7	28.8	24.5
MGA_450	LOCUS_04490	sequence1:337657..338079(-)	internal_stop_codon	338197..338199(-)		WP_009880896.1	deoxyribose-phosphate aldolase	99.3	62.3	49.6
MGA_451	LOCUS_04500	sequence1:338666..339646(-)	internal_stop_codon	338666..338668(-)		WP_012583823.1	pyrimidine-nucleoside phosphorylase	97.2	73.5	50.5
MGA_452	LOCUS_04510	sequence1:339650..339955(-)	internal_stop_codon	340019..340021(-)		WP_000022100.1	purine-nucleoside phosphorylase	99.0	43.2	38.5
MGA_453	LOCUS_04520	sequence1:340019..340348(-)	internal_stop_codon	340019..340021(-)		WP_011183561.1	purine-nucleoside phosphorylase	100.0	46.4	60.6
MGA_455	LOCUS_04540	sequence1:341952..344120(-)	internal_stop_codon	341952..341954(-)		WP_003722642.1	preprotein translocase subunit SecA	95.6	82.3	49.1
MGA_468	LOCUS_04670	sequence1:355265..355558(-)	internal_stop_codon	355820..355822(-),355610..355612(-)		WP_011166416.1	DNA cytosine methyltransferase	94.8	27.0	76.1
MGA_469	LOCUS_04680	sequence1:355820..356329(-)	internal_stop_codon	355820..355822(-),355610..355612(-)		WP_011166416.1	DNA cytosine methyltransferase	92.9	46.0	71.3
MGA_481	LOCUS_04800	sequence1:370330..370710(-)	partial			WP_042733551.1	IS3 family transposase	83.3	25.4	34.3
MGA_517	LOCUS_05160	sequence1:396350..397897(+)	internal_stop_codon	396158..396160(+)		WP_001045361.1	N-6 DNA methylase	91.7	69.5	27.5
MGA_521	LOCUS_05200	sequence1:401965..402387(-)	internal_stop_codon	401965..401967(-),402445..402447(-)		WP_011836924.1	ZmpA/ZmpB/ZmpC family metallo-endopeptidase	90.0	6.8	33.6
MGA_524	LOCUS_05230	sequence1:403828..404823(-)	internal_stop_codon	404824..404826(-)		WP_000417171.1	immunoglobulin A1 protease	81.6	13.9	31.1
MGA_526	LOCUS_05250	sequence1:405713..406249(+)	internal_stop_codon	406247..406249(+),406265..406267(+)		WP_003431138.1	ribulose-phosphate 3-epimerase	100.0	81.2	25.3
MGA_530	LOCUS_05290	sequence1:408384..408659(+)	internal_stop_codon	408691..408693(+)		WP_011166584.1	PTS ascorbate-specific subunit IIBC	83.5	12.5	38.5
MGA_531	LOCUS_05300	sequence1:408772..409527(+)	internal_stop_codon	409525..409527(+)		WP_011183539.1	PTS ascorbate transporter subunit IIC	94.8	46.4	38.7
MGA_532	LOCUS_05310	sequence1:409537..409953(+)	internal_stop_codon	409525..409527(+)		WP_005463995.1	PTS ascorbate transporter subunit IIC	95.7	30.4	57.6
MGA_534	LOCUS_05330	sequence1:410393..411103(+)	internal_stop_codon	411101..411103(+),411197..411199(+),410348..410350(+)		WP_000481443.1	transketolase	93.2	33.5	41.8
MGA_535	LOCUS_05340	sequence1:411200..411967(+)	internal_stop_codon	411101..411103(+),411197..411199(+),411965..411967(+)		WP_010874439.1	transketolase	97.3	40.0	39.8
MGA_537	LOCUS_05360	sequence1:413729..413953(-)	internal_stop_codon	413960..413962(-)		WP_100609812.1	phosphoenolpyruvate--protein phosphotransferase	90.5	11.7	50.7
MGA_540	LOCUS_05390	sequence1:416595..417371(+)	internal_stop_codon	417369..417371(+)		WP_011167069.1	ABC transporter permease	98.1	51.1	31.8
MGA_541	LOCUS_05400	sequence1:417405..417773(+)	internal_stop_codon	417369..417371(+),417771..417773(+),418020..418022(+)		WP_011166520.1	ABC transporter permease	98.4	20.2	33.9
MGA_550	LOCUS_05490	sequence1:423244..423615(+)	internal_stop_codon	423613..423615(+),423694..423696(+)		WP_002262605.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	99.2	58.3	42.3
MGA_551	LOCUS_05500	sequence1:423917..424813(+)	internal_stop_codon	424811..424813(+),425054..425056(+),425009..425011(+)		WP_011182967.1	M17 family metallopeptidase	89.9	57.8	36.6
MGA_552	LOCUS_05510	sequence1:424868..425011(+)	internal_stop_codon	424811..424813(+),425054..425056(+),425009..425011(+)		WP_011015910.1	leucyl aminopeptidase	100.0	9.8	59.6
MGA_553	LOCUS_05520	sequence1:425060..425290(+)	internal_stop_codon	424811..424813(+),425054..425056(+),425009..425011(+)		WP_164922489.1	leucyl aminopeptidase	78.9	13.4	46.3
MGA_558	LOCUS_05570	sequence1:428539..429126(-)	frameshift,internal_stop_codon	429244..429246(-),429136..429138(-)	428592	WP_011183201.1	DNA (cytosine-5-)-methyltransferase	89.2	48.1	30.1
MGA_559	LOCUS_05580	sequence1:429244..429570(-)	internal_stop_codon	429136..429138(-),429244..429246(-),429616..429618(-)		WP_011183201.1	DNA (cytosine-5-)-methyltransferase	85.2	21.8	38.6
MGA_566	LOCUS_05650	sequence1:434601..435050(-)	internal_stop_codon	434556..434558(-),434601..434603(-),434376..434378(-)		WP_011074430.1	IS256-like element ISSod4 family transposase	73.8	25.5	44.1
MGA_568	LOCUS_05670	sequence1:436367..436843(+)	internal_stop_codon	436328..436330(+),436841..436843(+)		WP_013447835.1	NAD(+) synthase	100.0	66.1	44.4
MGA_569	LOCUS_05680	sequence1:437117..437647(+)	internal_stop_codon	437039..437041(+),437645..437647(+)		WP_003546668.1	YebC/PmpR family DNA-binding transcriptional regulator	88.6	64.0	38.9
MGA_575	LOCUS_05740	sequence1:441807..442328(+)	internal_stop_codon	442326..442328(+),441741..441743(+),441591..441593(+)		WP_011183311.1	tRNA 2-thiouridine(34) synthase MnmA	99.4	47.6	59.0
MGA_576	LOCUS_05750	sequence1:442368..442601(+)	internal_stop_codon	442326..442328(+)		WP_001038010.1	tRNA 2-thiouridine(34) synthase MnmA	84.4	17.8	45.5
MGA_582	LOCUS_05810	sequence1:446127..446498(-)	internal_stop_codon	446535..446537(-)		WP_010874855.1	hypothetical protein	78.0	59.5	32.0
MGA_583	LOCUS_05820	sequence1:446605..446997(-)	partial			WP_011254202.1	Cof-type HAD-IIB family hydrolase	96.2	46.1	35.2
MGA_585	LOCUS_05840	sequence1:447467..447607(-)	internal_stop_codon	447860..447862(-)		WP_010874854.1	L-ribulose-5-phosphate 4-epimerase	95.7	18.2	68.2
MGA_586	LOCUS_05850	sequence1:447860..448018(-)	internal_stop_codon	447860..447862(-),448091..448093(-)		WP_010874854.1	L-ribulose-5-phosphate 4-epimerase	100.0	21.9	66.0
MGA_588	LOCUS_05870	sequence1:449338..449712(-)	internal_stop_codon	449251..449253(-),449320..449322(-),449290..449292(-),449338..449340(-)		WP_010874849.1	3-dehydro-L-gulonate-6-phosphate decarboxylase	100.0	55.0	59.7
MGA_593	LOCUS_05920	sequence1:453763..454743(+)	partial			WP_010874572.1	ABC transporter permease	81.0	68.1	31.8
MGA_595	LOCUS_05940	sequence1:455540..455953(+)	internal_stop_codon	455507..455509(+),455306..455308(+),455474..455476(+),455318..455320(+),455423..455425(+)		WP_010874573.1	ABC transporter permease	93.4	32.7	37.2
MGA_596	LOCUS_05950	sequence1:455953..456213(+)	internal_stop_codon	456211..456213(+)		WP_010874574.1	ABC transporter ATP-binding protein	90.7	18.2	51.3
MGA_597	LOCUS_05960	sequence1:456298..456720(+)	internal_stop_codon	456211..456213(+),456718..456720(+),456910..456912(+)		WP_010874574.1	ABC transporter ATP-binding protein	85.0	28.1	55.5
MGA_598	LOCUS_05970	sequence1:456993..457385(+)	internal_stop_codon	457383..457385(+)		WP_010874575.1	ATP-binding cassette domain-containing protein	93.8	14.3	42.6
MGA_601	LOCUS_06000	sequence1:458967..459305(+)	partial			WP_010874575.1	ATP-binding cassette domain-containing protein	100.0	13.4	43.9
MGA_603	LOCUS_06020	sequence1:460581..461051(+)	internal_stop_codon	460497..460499(+),460551..460553(+),461049..461051(+)		WP_003232311.1	pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase	96.8	34.2	46.4
MGA_604	LOCUS_06030	sequence1:461132..461707(+)	internal_stop_codon	461705..461707(+),461834..461836(+)		WP_011182939.1	dihydrolipoyl dehydrogenase	100.0	28.1	42.8
MGA_605	LOCUS_06040	sequence1:461843..462928(+)	internal_stop_codon	461705..461707(+),462926..462928(+),461834..461836(+)		WP_011166465.1	dihydrolipoyl dehydrogenase	99.4	61.7	43.3
MGA_620	LOCUS_06190	sequence1:476221..476544(+)	partial			WP_004454798.1	Cof-type HAD-IIB family hydrolase	72.0	27.8	40.3
MGA_621	LOCUS_06200	sequence1:476547..477257(+)	internal_stop_codon	477255..477257(+),477351..477353(+)		WP_011183272.1	nicotinate-nucleotide adenylyltransferase	98.7	63.1	31.4
MGA_641	LOCUS_06400	sequence1:488611..488817(+)	partial			WP_011166803.1	DUF31 family protein	98.5	7.8	49.3
MGA_642	LOCUS_06410	sequence1:490897..491298(-)	internal_stop_codon	491338..491340(-),491521..491523(-),491401..491403(-)		WP_010874492.1	sugar ABC transporter permease	95.5	38.6	47.7
MGA_644	LOCUS_06430	sequence1:491904..492371(-)	internal_stop_codon	492438..492440(-)		WP_010874491.1	ABC transporter ATP-binding protein	100.0	26.5	39.9
MGA_645	LOCUS_06440	sequence1:492438..492818(-)	internal_stop_codon	492438..492440(-)		WP_010874491.1	ABC transporter ATP-binding protein	84.9	18.3	59.8
MGA_648	LOCUS_06470	sequence1:493662..494084(-)	internal_stop_codon	493662..493664(-)		WP_010874491.1	ABC transporter ATP-binding protein	78.6	18.8	61.8
MGA_651	LOCUS_06500	sequence1:495426..496391(-)	internal_stop_codon	495426..495428(-)		WP_010874641.1	P80 family lipoprotein	38.0	17.1	31.4
MGA_671	LOCUS_06700	sequence1:512183..512350(+)	internal_stop_codon	511976..511978(+),512060..512062(+),512348..512350(+),511967..511969(+),512159..512161(+),512546..512548(+)		WP_004556718.1	glycerol kinase GlpK	100.0	11.0	67.3
MGA_672	LOCUS_06710	sequence1:512663..512842(+)	internal_stop_codon	512840..512842(+),512546..512548(+),512936..512938(+)		WP_003643773.1	glycerol kinase GlpK	93.2	10.9	60.0
MGA_678	LOCUS_06770	sequence1:516681..516932(-)	frameshift,internal_stop_codon	517080..517082(-),516585..516587(-),516681..516683(-)	516560,516659	WP_042733551.1	IS3 family transposase	98.8	18.8	52.4
MGA_679	LOCUS_06780	sequence1:517080..517286(-)	internal_stop_codon	517080..517082(-)		WP_042733551.1	IS3 family transposase	95.6	15.3	44.6
MGA_681	LOCUS_06800	sequence1:517942..519207(-)	frameshift		519238,519263	WP_170127867.1	IS1634 family transposase	94.1	73.7	44.1
MGA_683	LOCUS_06820	sequence1:519831..520202(-)	partial			WP_010874408.1	type 2 glycerol-3-phosphate oxidase	92.7	29.7	44.7
MGA_684	LOCUS_06830	sequence1:520731..520964(-)	internal_stop_codon	520503..520505(-),520731..520733(-)		WP_010874408.1	type 2 glycerol-3-phosphate oxidase	93.5	18.8	52.8
MGA_685	LOCUS_06840	sequence1:521424..521702(-)	internal_stop_codon	521724..521726(-)		WP_015039633.1	threonine--tRNA ligase	89.1	12.6	37.8
MGA_686	LOCUS_06850	sequence1:521724..521867(-)	internal_stop_codon	521724..521726(-),522030..522032(-)		WP_011183074.1	threonine--tRNA ligase	97.9	7.1	60.9
MGA_687	LOCUS_06860	sequence1:522030..522536(-)	internal_stop_codon	522681..522683(-),522549..522551(-),522732..522734(-),522030..522032(-)		WP_011183074.1	threonine--tRNA ligase	98.8	26.2	45.0
MGA_688	LOCUS_06870	sequence1:522732..523163(-)	internal_stop_codon	522681..522683(-),522549..522551(-),522732..522734(-)		WP_000786086.1	threonine--tRNA ligase	95.8	21.4	48.2
MGA_689	LOCUS_06880	sequence1:523167..523835(-)	internal_stop_codon	523875..523877(-)		WP_000110984.1	tryptophan--tRNA ligase	100.0	66.9	43.6
MGA_690	LOCUS_06890	sequence1:523875..524150(-)	internal_stop_codon	523875..523877(-)		WP_011125215.1	tryptophan--tRNA ligase	97.8	26.3	49.4
MGA_694	LOCUS_06930	sequence1:525833..526966(+)	internal_stop_codon	525662..525664(+),526964..526966(+)		WP_010874510.1	AAA domain-containing protein	95.5	33.2	24.7
MGA_695	LOCUS_06940	sequence1:527042..527380(+)	internal_stop_codon	526964..526966(+)		WP_053061269.1	DUF3320 domain-containing protein	85.7	5.5	34.9
MGA_698	LOCUS_06970	sequence1:528661..528825(+)	partial			WP_014574997.1	YneF family protein	98.1	72.6	58.5
MGA_699	LOCUS_06980	sequence1:528832..530103(+)	internal_stop_codon	530101..530103(+)		WP_010874985.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	99.5	83.1	50.7
MGA_704	LOCUS_07030	sequence1:532902..533531(-)	internal_stop_codon	533565..533567(-)		WP_001040960.1	proline--tRNA ligase	100.0	42.9	37.3
MGA_708	LOCUS_07070	sequence1:537150..537551(+)	internal_stop_codon	537549..537551(+)		WP_003020492.1	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	100.0	43.3	50.7
MGA_709	LOCUS_07080	sequence1:537657..538040(+)	internal_stop_codon	537549..537551(+)		WP_004080729.1	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	95.3	37.8	42.3
MGA_714	LOCUS_07130	sequence1:541127..541660(+)	internal_stop_codon	541103..541105(+),541703..541705(+),541907..541909(+),541658..541660(+),541781..541783(+)		WP_002289325.1	methionine--tRNA ligase	97.7	26.8	45.3
MGA_715	LOCUS_07140	sequence1:541931..542182(+)	internal_stop_codon	542180..542182(+),541703..541705(+),542327..542329(+),541907..541909(+),541658..541660(+),541781..541783(+)		WP_011166223.1	methionine--tRNA ligase	100.0	17.3	36.4
MGA_725	LOCUS_07240	sequence1:547933..548382(+)	internal_stop_codon	548380..548382(+),548467..548469(+),547783..547785(+)		WP_013390020.1	type I restriction-modification system subunit M	100.0	17.8	56.6
MGA_726	LOCUS_07250	sequence1:548548..549504(+)	internal_stop_codon	548380..548382(+),548467..548469(+)		WP_011068835.1	type I restriction-modification system subunit M	90.3	33.3	37.2
MGA_727	LOCUS_07260	sequence1:550311..550541(+)	internal_stop_codon	550539..550541(+),550194..550196(+),550581..550583(+),550239..550241(+)		WP_002681379.1	restriction endonuclease subunit S	98.7	11.8	42.7
MGA_729	LOCUS_07280	sequence1:551309..552001(+)	internal_stop_codon	551999..552001(+)		WP_011068838.1	HsdR family type I site-specific deoxyribonuclease	92.6	18.4	38.2
MGA_730	LOCUS_07290	sequence1:552068..553012(+)	internal_stop_codon	551999..552001(+),553010..553012(+)		WP_011068838.1	HsdR family type I site-specific deoxyribonuclease	77.1	21.6	42.4
MGA_731	LOCUS_07300	sequence1:553196..553681(+)	internal_stop_codon	553010..553012(+),553679..553681(+)		WP_011068838.1	HsdR family type I site-specific deoxyribonuclease	99.4	14.5	36.9
MGA_760	LOCUS_07590	sequence1:574498..574827(-)	internal_stop_codon	575029..575031(-),574912..574914(-)		WP_011476249.1	beta-phosphoglucomutase	99.1	47.5	50.9
MGA_761	LOCUS_07600	sequence1:575345..575956(-)	internal_stop_codon	576014..576016(-),575264..575266(-),575345..575347(-)		WP_011861487.1	glycoside hydrolase family 65 protein	98.5	25.8	35.7
MGA_762	LOCUS_07610	sequence1:576551..577465(-)	internal_stop_codon	576389..576391(-)		WP_010990086.1	glycoside hydrolase family 65 protein	81.2	32.1	23.6
MGA_763	LOCUS_07620	sequence1:577467..577781(-)	internal_stop_codon	577851..577853(-),577809..577811(-)		WP_011949139.1	alpha-glucosidase	99.0	19.7	36.9
MGA_764	LOCUS_07630	sequence1:577851..578054(-)	internal_stop_codon	577851..577853(-),577809..577811(-),578115..578117(-),578094..578096(-)		WP_011102265.1	alpha-glucosidase	94.0	11.3	44.4
MGA_765	LOCUS_07640	sequence1:578958..579101(-)	internal_stop_codon	578775..578777(-),578958..578960(-)		WP_003088929.1	maltose alpha-D-glucosyltransferase	89.4	3.8	57.1
MGA_767	LOCUS_07660	sequence1:580025..580723(-)	partial			WP_011836521.1	pullulanase	93.5	17.9	38.4
MGA_778	LOCUS_07770	sequence1:588936..589304(+)	internal_stop_codon	589302..589304(+)		WP_003228283.1	arabinogalactan oligomer ABC transporter permease GanQ	100.0	42.4	47.5
MGA_781	LOCUS_07800	sequence1:592478..592702(+)	frameshift		592693	WP_042733551.1	IS3 family transposase	94.6	16.7	49.3
MGA_782	LOCUS_07810	sequence1:592830..593078(+)	frameshift,internal_stop_codon	593172..593174(+),593208..593210(+),593076..593078(+)	593147,592693	WP_042733551.1	IS3 family transposase	100.0	19.0	53.7
MGA_807	LOCUS_08060	sequence1:617049..617624(-)	partial			WP_011182916.1	ABC transporter ATP-binding protein	92.7	29.3	48.0
MGA_813	LOCUS_08120	sequence1:620213..620539(+)	internal_stop_codon	620537..620539(+)		WP_011861614.1	RluA family pseudouridine synthase	92.6	32.7	35.6
MGA_814	LOCUS_08130	sequence1:620699..621127(+)	internal_stop_codon	620537..620539(+)		WP_011166761.1	RluA family pseudouridine synthase	91.5	41.9	47.8
MGA_835	LOCUS_08340	sequence1:652141..652731(-)	internal_stop_codon	652924..652926(-)		WP_011166467.1	acetate kinase	99.5	48.1	45.1
MGA_863	LOCUS_08620	sequence1:673326..673892(-)	internal_stop_codon	673326..673328(-),673977..673979(-)		WP_004453998.1	oligoendopeptidase F	100.0	31.3	39.7
MGA_873	LOCUS_08720	sequence1:679320..679754(+)	partial			WP_205842899.1	DUF31 family protein	70.8	12.9	40.8
MGA_879	LOCUS_08780	sequence1:685308..685640(+)	internal_stop_codon	685638..685640(+)		WP_003688741.1	zinc-dependent alcohol dehydrogenase family protein	95.5	30.3	61.0
MGA_880	LOCUS_08790	sequence1:685653..686057(+)	internal_stop_codon	686055..686057(+),686148..686150(+),685638..685640(+)		WP_002225132.1	zinc-dependent alcohol dehydrogenase family protein	100.0	39.0	67.4
MGA_881	LOCUS_08800	sequence1:687426..687674(-)	frameshift,internal_stop_codon	687330..687332(-),687294..687296(-),687426..687428(-)	687810	WP_042733551.1	IS3 family transposase	100.0	19.0	53.7
MGA_882	LOCUS_08810	sequence1:687802..688026(-)	frameshift		687810	WP_042733551.1	IS3 family transposase	94.6	17.1	46.6
MGA_885	LOCUS_08840	sequence1:690733..691851(-)	internal_stop_codon	690733..690735(-),691921..691923(-)		WP_011166795.1	ATP F0F1 synthase subunit alpha	99.5	71.8	54.3
MGA_887	LOCUS_08860	sequence1:692574..693236(-)	partial			WP_011166796.1	hypothetical protein	76.8	18.7	28.4
MGA_897	LOCUS_08960	sequence1:698254..698670(+)	partial			WP_000593361.1	Cof-type HAD-IIB family hydrolase	79.0	37.7	38.5
MGA_899	LOCUS_08980	sequence1:699453..700040(-)	internal_stop_codon	700053..700055(-)		WP_005898141.1	magnesium transporter	77.4	28.9	35.8
MGA_900	LOCUS_08990	sequence1:700053..700916(-)	internal_stop_codon	700053..700055(-)		WP_011986205.1	magnesium transporter	96.5	62.4	33.5
MGA_901	LOCUS_09000	sequence1:700923..701534(-)	partial			WP_002389035.1	diadenylate cyclase CdaA	97.0	73.5	36.6
MGA_903	LOCUS_09020	sequence1:706610..707041(+)	internal_stop_codon	707039..707041(+)		WP_010989997.1	phosphoglycerate kinase	95.1	34.3	56.6
MGA_904	LOCUS_09030	sequence1:707303..707581(+)	internal_stop_codon	707579..707581(+),707039..707041(+)		WP_002357094.1	phosphoglycerate kinase	100.0	22.9	53.3
MGA_906	LOCUS_09050	sequence1:708880..709875(+)	internal_stop_codon	709876..709878(+),709873..709875(+)		WP_000609957.1	fructose-specific PTS transporter subunit EIIC	98.5	50.9	31.5
MGA_907	LOCUS_09060	sequence1:709879..710187(+)	internal_stop_codon	710227..710229(+),709876..709878(+),710185..710187(+),710479..710481(+),709873..709875(+)		WP_005423023.1	fructose-specific PTS transporter subunit EIIC	100.0	15.2	50.0
MGA_908	LOCUS_09070	sequence1:710230..710481(+)	internal_stop_codon	710227..710229(+),710185..710187(+),710479..710481(+)		WP_005423023.1	fructose-specific PTS transporter subunit EIIC	61.4	8.1	60.8
MGA_909	LOCUS_09080	sequence1:710533..710802(+)	internal_stop_codon	710479..710481(+)		WP_002456327.1	fructose-specific PTS transporter subunit EIIC	93.3	11.6	45.8
MGA_911	LOCUS_09100	sequence1:711465..712043(+)	internal_stop_codon	711459..711461(+),711243..711245(+)		WP_011476470.1	mannose-6-phosphate isomerase, class I	71.4	44.9	34.0
MGA_916	LOCUS_09150	sequence1:717805..718104(+)	internal_stop_codon	718102..718104(+)		WP_003699839.1	elongation factor P	99.0	53.0	49.0
MGA_917	LOCUS_09160	sequence1:718141..718368(+)	internal_stop_codon	718102..718104(+)		WP_000626516.1	elongation factor P	92.0	37.3	50.7
MGA_918	LOCUS_09170	sequence1:718370..718609(+)	internal_stop_codon	718607..718609(+)		WP_000067852.1	transketolase	64.6	7.8	47.1
MGA_919	LOCUS_09180	sequence1:718631..719254(+)	internal_stop_codon	718607..718609(+),719489..719491(+),719252..719254(+)		WP_002295818.1	transketolase	99.5	32.2	52.8
MGA_920	LOCUS_09190	sequence1:719582..720007(+)	internal_stop_codon	720158..720160(+),719489..719491(+),720110..720112(+),720092..720094(+),720005..720007(+)		WP_003245397.1	transketolase	99.3	21.6	56.2
MGA_957	LOCUS_09560	sequence1:745985..746398(+)	internal_stop_codon	746396..746398(+)		WP_011166843.1	ribonuclease J	97.8	22.0	44.8
MGA_958	LOCUS_09570	sequence1:746462..747553(+)	internal_stop_codon	746396..746398(+)		WP_000811375.1	ribonuclease J	95.3	61.1	41.2
MGA_960	LOCUS_09590	sequence1:748505..749710(+)	internal_stop_codon	749708..749710(+)		WP_011182956.1	excinuclease ABC subunit UvrA	97.8	41.9	49.2
MGA_961	LOCUS_09600	sequence1:749720..751348(+)	internal_stop_codon	749708..749710(+)		WP_002296519.1	excinuclease ABC subunit UvrA	99.3	57.4	61.0
MGA_968	LOCUS_09670	sequence1:757650..758003(-)	internal_stop_codon	758034..758036(-),757650..757652(-),757416..757418(-),757473..757475(-)		WP_010874852.1	PTS ascorbate transporter subunit IIC	90.6	16.1	72.6
MGA_969	LOCUS_09680	sequence1:758034..758561(-)	internal_stop_codon	758664..758666(-),758034..758036(-)		WP_010874852.1	PTS ascorbate transporter subunit IIC	82.9	21.8	59.3
MGA_970	LOCUS_09690	sequence1:758664..759056(-)	internal_stop_codon	758664..758666(-)		WP_010874852.1	PTS ascorbate transporter subunit IIC	89.2	19.2	48.8
MGA_971	LOCUS_09700	sequence1:759129..759821(-)	internal_stop_codon	759855..759857(-)		WP_205842938.1	phosphotriesterase	100.0	65.5	80.4
MGA_972	LOCUS_09710	sequence1:759855..760190(-)	internal_stop_codon	759855..759857(-)		WP_205842938.1	phosphotriesterase	96.4	30.5	81.3
MGA_976	LOCUS_09750	sequence1:762033..762683(-)	internal_stop_codon	762033..762035(-),761844..761846(-)		WP_011166703.1	hypothetical protein	96.3	35.0	32.7
MGA_977	LOCUS_09760	sequence1:763071..763373(+)	internal_stop_codon	763386..763388(+),763371..763373(+)		WP_011166700.1	ABC transporter ATP-binding protein	96.0	25.1	42.2
MGA_978	LOCUS_09770	sequence1:763392..764231(+)	internal_stop_codon	763386..763388(+),763371..763373(+)		WP_011166700.1	ABC transporter ATP-binding protein	83.2	57.6	46.4
MGA_979	LOCUS_09780	sequence1:764218..764703(+)	internal_stop_codon	764701..764703(+),764725..764727(+)		WP_020862766.1	sugar ABC transporter permease	83.9	41.5	29.3
MGA_980	LOCUS_09790	sequence1:764749..765147(+)	internal_stop_codon	764701..764703(+),764725..764727(+)		WP_020862766.1	sugar ABC transporter permease	97.0	40.4	33.8
MGA_982	LOCUS_09810	sequence1:765431..765763(+)	internal_stop_codon	765761..765763(+),765776..765778(+),765824..765826(+),765428..765430(+),765341..765343(+)		WP_011166702.1	ABC transporter permease subunit	96.4	38.7	34.9
MGA_985	LOCUS_09840	sequence1:767169..767393(+)	frameshift		767384	WP_042733551.1	IS3 family transposase	94.6	17.1	46.6
MGA_986	LOCUS_09850	sequence1:767521..767769(+)	frameshift,internal_stop_codon	767767..767769(+),767899..767901(+),767863..767865(+)	767384,767838	WP_042733551.1	IS3 family transposase	100.0	19.0	53.7
MGA_989	LOCUS_09880	sequence1:769530..770180(-)	internal_stop_codon	769530..769532(-),769344..769346(-),770289..770291(-)		WP_011166703.1	hypothetical protein	93.1	33.1	33.2
MGA_993	LOCUS_09920	sequence1:775054..775329(-)	internal_stop_codon	775405..775407(-)		WP_010964035.1	SsrA-binding protein SmpB	95.6	58.1	38.9
MGA_995	LOCUS_09940	sequence1:775898..777256(+)	internal_stop_codon	777272..777274(+),775826..775828(+),777254..777256(+)		WP_011949094.1	cation-translocating P-type ATPase	97.3	52.3	35.8
MGA_996	LOCUS_09950	sequence1:777374..777661(+)	internal_stop_codon	777272..777274(+),777659..777661(+),777254..777256(+)		WP_011016840.1	calcium-translocating P-type ATPase, PMCA-type	100.0	11.0	52.6
MGA_998	LOCUS_09970	sequence1:778772..779119(-)	internal_stop_codon	778772..778774(-)		WP_005902445.1	nucleotidyltransferase family protein	98.3	28.5	42.5
MGA_1006	LOCUS_10050	sequence1:785849..787018(-)	internal_stop_codon	787058..787060(-)		WP_011166468.1	DUF31 family protein	98.7	63.0	27.3
MGA_1015	LOCUS_10140	sequence1:794075..794569(+)	internal_stop_codon	794567..794569(+)		WP_010874462.1	phenylalanine--tRNA ligase subunit alpha	96.3	47.5	38.3
MGA_1016	LOCUS_10150	sequence1:794609..794752(+)	internal_stop_codon	794567..794569(+)		WP_010874462.1	phenylalanine--tRNA ligase subunit alpha	100.0	14.1	64.6
MGA_1024	LOCUS_10230	sequence1:799121..799348(+)	partial			WP_010360614.1	Cof-type HAD-IIB family hydrolase	82.7	23.3	46.8
MGA_1033	LOCUS_10320	sequence1:803493..803942(-)	internal_stop_codon	803493..803495(-),803448..803450(-),803268..803270(-)		WP_000343613.1	IS256-like element ISEc39 family transposase	87.2	31.8	40.9
MGA_1034	LOCUS_10330	sequence1:804173..805000(-)	partial			WP_011949183.1	ABC transporter ATP-binding protein	73.8	38.0	30.8
MGA_1036	LOCUS_10350	sequence1:805824..806483(-)	internal_stop_codon	805824..805826(-)		WP_011949183.1	ABC transporter ATP-binding protein	95.4	38.8	32.9
MGA_1040	LOCUS_10390	sequence1:808011..808877(+)	internal_stop_codon	808875..808877(+)		WP_012257008.1	CTP synthase	96.9	50.7	49.5
MGA_1041	LOCUS_10400	sequence1:809160..809615(+)	partial			WP_169539111.1	CTP synthase	98.0	28.6	43.9
MGA_1046	LOCUS_10450	sequence1:812786..812974(-)	partial			WP_011250042.1	DNA topoisomerase I	56.5	2.8	60.0
MGA_1047	LOCUS_10460	sequence1:813026..814270(-)	internal_stop_codon	813026..813028(-)		WP_012047858.1	type I DNA topoisomerase	100.0	58.9	33.6
MGA_1050	LOCUS_10490	sequence1:815930..816097(-)	internal_stop_codon	815930..815932(-)		WP_002290274.1	30S ribosomal protein S16	92.7	56.0	66.7
MGA_1051	LOCUS_10500	sequence1:817230..817475(+)	frameshift,internal_stop_codon	817700..817702(+),817474..817476(+),817519..817521(+)	817599,817639,817215	WP_000343613.1	IS256-like element ISEc39 family transposase	92.6	18.7	46.7
MGA_1054	LOCUS_10530	sequence1:819895..820161(+)	internal_stop_codon	820159..820161(+)		WP_001114579.1	DNA-formamidopyrimidine glycosylase	95.5	29.9	50.0
MGA_1055	LOCUS_10540	sequence1:820390..820713(+)	internal_stop_codon	820159..820161(+)		WP_011183479.1	DNA-formamidopyrimidine glycosylase	98.1	38.2	51.4
MGA_1056	LOCUS_10550	sequence1:821112..821360(-)	frameshift,internal_stop_codon	821340..821342(-),821111..821113(-),821607..821609(-),821090..821092(-)	821432,821333	WP_011815235.1	IS256 family transposase	90.2	18.5	47.3
MGA_1057	LOCUS_10560	sequence1:821832..822281(-)	internal_stop_codon	821607..821609(-),821787..821789(-),821832..821834(-)		WP_000343613.1	IS256-like element ISEc39 family transposase	81.9	29.6	43.9
MGA_1058	LOCUS_10570	sequence1:823173..824876(-)	internal_stop_codon	824889..824891(-),823173..823175(-),825129..825131(-)		WP_011166932.1	NAD-dependent DNA ligase LigA	98.6	82.2	41.6
MGA_1059	LOCUS_10580	sequence1:825221..825691(-)	partial			WP_011183051.1	energy-coupling factor transporter transmembrane component T	100.0	47.0	51.9
MGA_1061	LOCUS_10600	sequence1:826377..827051(-)	internal_stop_codon	826377..826379(-)		WP_002381364.1	energy-coupling factor ABC transporter ATP-binding protein	99.1	72.3	48.0
MGA_1062	LOCUS_10610	sequence1:827048..827842(-)	partial			WP_011183049.1	energy-coupling factor transporter ATPase	99.6	65.5	47.9
MGA_1063	LOCUS_10620	sequence1:827891..828211(-)	internal_stop_codon	827891..827893(-),828317..828319(-)		WP_003226700.1	hypoxanthine phosphoribosyltransferase	99.1	58.3	51.4
MGA_1064	LOCUS_10630	sequence1:828424..828828(-)	internal_stop_codon	828859..828861(-)		WP_004081030.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	81.3	49.5	32.7
MGA_1065	LOCUS_10640	sequence1:828859..829155(-)	internal_stop_codon	828859..828861(-)		WP_012583798.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	100.0	34.3	55.0
MGA_1066	LOCUS_10650	sequence1:829571..829993(-)	partial			WP_011166256.1	DNA polymerase III subunit delta	65.7	36.2	39.1
MGA_1068	LOCUS_10670	sequence1:830809..831240(-)	internal_stop_codon	830809..830811(-)		WP_008763508.1	recombination mediator RecR	95.8	69.3	35.9
MGA_1071	LOCUS_10700	sequence1:832949..833737(-)	internal_stop_codon	833801..833803(-)		WP_002262806.1	DNA polymerase III subunit gamma/tau	100.0	47.5	47.2
MGA_1073	LOCUS_10720	sequence1:834324..835040(+)	internal_stop_codon	835038..835040(+)		WP_011861285.1	lipoate--protein ligase	99.6	69.8	40.2
MGA_1075	LOCUS_10740	sequence1:835329..835745(+)	partial			WP_010874829.1	alpha/beta hydrolase	84.1	45.9	33.9
MGA_1078	LOCUS_10770	sequence1:837609..837920(-)	internal_stop_codon	837609..837611(-),837945..837947(-),837414..837416(-)		WP_011182914.1	serine--tRNA ligase	99.0	24.4	59.2
MGA_1079	LOCUS_10780	sequence1:837945..838082(-)	internal_stop_codon	838353..838355(-),838242..838244(-),837945..837947(-),838335..838337(-)		WP_012869753.1	serine--tRNA ligase	100.0	10.5	53.3
MGA_1081	LOCUS_10800	sequence1:838637..838861(-)	internal_stop_codon	839057..839059(-)		WP_011015819.1	phosphopyruvate hydratase	95.9	15.9	69.0
MGA_1082	LOCUS_10810	sequence1:839057..839788(-)	internal_stop_codon	839057..839059(-),839807..839809(-)		WP_002357098.1	phosphopyruvate hydratase	99.2	53.0	54.4
MGA_1083	LOCUS_10820	sequence1:839807..839992(-)	internal_stop_codon	839807..839809(-)		WP_003700615.1	phosphopyruvate hydratase	93.4	12.9	68.4
MGA_1084	LOCUS_10830	sequence1:840142..840681(-)	internal_stop_codon	840697..840699(-)		WP_012545731.1	ribulose-phosphate 3-epimerase	98.9	80.8	37.8
MGA_1085	LOCUS_10840	sequence1:840773..841342(-)	internal_stop_codon	841442..841444(-)		WP_011166503.1	ribosome small subunit-dependent GTPase A	89.4	60.3	42.6
MGA_1087	LOCUS_10860	sequence1:842000..842212(-)	internal_stop_codon	842000..842002(-)		WP_003431170.1	guanylate kinase	95.7	32.2	55.2
MGA_1090	LOCUS_10890	sequence1:843795..844706(+)	internal_stop_codon	844704..844706(+)		WP_011167050.1	lipoprotein	53.1	18.7	32.9
MGA_1091	LOCUS_10900	sequence1:844767..845069(+)	internal_stop_codon	845232..845234(+),844704..844706(+),845067..845069(+)		WP_011167050.1	lipoprotein	97.0	13.3	46.4
MGA_1092	LOCUS_10910	sequence1:845613..845798(+)	internal_stop_codon	845991..845993(+),845895..845897(+),846045..846047(+),845385..845387(+),845796..845798(+),846024..846026(+)		WP_011167050.1	lipoprotein	91.8	7.7	53.6
MGA_1093	LOCUS_10920	sequence1:846090..846392(+)	internal_stop_codon	845895..845897(+),846024..846026(+),845991..845993(+),846045..846047(+)		WP_011167050.1	lipoprotein	98.0	13.5	63.3
MGA_1094	LOCUS_10930	sequence1:847296..847553(+)	internal_stop_codon	847551..847553(+),847563..847565(+)		WP_005479994.1	peptide-methionine (R)-S-oxide reductase MsrB	87.1	18.7	52.7
MGA_1095	LOCUS_10940	sequence1:847617..847796(+)	internal_stop_codon	847551..847553(+),847563..847565(+)		WP_011986743.1	peptide-methionine (R)-S-oxide reductase MsrB	98.3	38.9	70.7
MGA_1098	LOCUS_10970	sequence1:849571..849843(+)	internal_stop_codon	849841..849843(+),849931..849933(+)		WP_010874674.1	APC family permease	90.0	17.7	42.5
MGA_1109	LOCUS_11080	sequence1:856607..857899(+)	partial			WP_011166393.1	DUF853 family protein	85.3	46.9	31.1
MGA_1119	LOCUS_11180	sequence1:863646..864110(-)	internal_stop_codon	863646..863648(-)		WP_060589244.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	98.7	67.5	33.1
MGA_1120	LOCUS_11190	sequence1:864435..864614(-)	internal_stop_codon	864861..864863(-),864801..864803(-),864651..864653(-)		WP_011167108.1	cysteine--tRNA ligase	88.1	11.8	44.2
MGA_1126	LOCUS_11250	sequence1:867250..867513(-)	internal_stop_codon	867748..867750(-)		WP_001831779.1	replicative DNA helicase	74.7	15.9	51.4
MGA_1128	LOCUS_11270	sequence1:867985..868212(-)	internal_stop_codon	867985..867987(-),867748..867750(-),868390..868392(-)		WP_011167105.1	replicative DNA helicase	84.0	14.4	55.6
MGA_1130	LOCUS_11290	sequence1:868847..869077(-)	internal_stop_codon	868847..868849(-)		WP_010966977.1	50S ribosomal protein L9	100.0	52.4	39.0
MGA_1134	LOCUS_11330	sequence1:871059..871454(-)	internal_stop_codon	871590..871592(-)		WP_015545302.1	leucine--tRNA ligase	98.5	16.3	34.4
MGA_1135	LOCUS_11340	sequence1:871590..871766(-)	internal_stop_codon	871590..871592(-),871905..871907(-),872007..872009(-),871836..871838(-)		WP_010874740.1	leucine--tRNA ligase	96.6	7.1	57.1
MGA_1136	LOCUS_11350	sequence1:872226..872639(-)	internal_stop_codon	872760..872762(-),872202..872204(-),872007..872009(-),872067..872069(-),872226..872228(-)		WP_010889717.1	leucine--tRNA ligase	85.4	15.6	35.9
MGA_1138	LOCUS_11370	sequence1:875208..875552(+)	partial			WP_002797817.1	CRISPR-associated endonuclease Cas2	88.6	70.6	35.6
MGA_1143	LOCUS_11400	sequence1:878748..879350(-)	internal_stop_codon	878652..878654(-),878616..878618(-),878748..878750(-)		WP_042733551.1	IS3 family transposase	99.0	45.8	49.7
MGA_1146	LOCUS_11430	sequence1:881523..883595(-)	partial			WP_002864485.1	type II CRISPR RNA-guided endonuclease Cas9	71.7	45.2	25.7
MGA_1151	LOCUS_11480	sequence1:885711..886034(-)	partial			WP_009967069.1	serine protease HtrA	90.7	23.8	37.0
MGA_1153	LOCUS_11500	sequence1:888085..888231(-)	internal_stop_codon	888334..888336(-)		WP_010938622.1	30S ribosomal protein S11	100.0	37.2	47.9
MGA_1157	LOCUS_11540	sequence1:889480..890130(-)	internal_stop_codon	889480..889482(-)		WP_011173700.1	type I methionyl aminopeptidase	98.6	83.9	44.9
MGA_1159	LOCUS_11560	sequence1:890792..891241(-)	internal_stop_codon	891254..891256(-)		WP_011166894.1	preprotein translocase subunit SecY	80.5	25.1	33.1
MGA_1160	LOCUS_11570	sequence1:891254..891673(-)	internal_stop_codon	891707..891709(-),891254..891256(-)		WP_011166894.1	preprotein translocase subunit SecY	87.8	25.7	47.6
MGA_1161	LOCUS_11580	sequence1:891707..892087(-)	internal_stop_codon	891707..891709(-)		WP_003427725.1	preprotein translocase subunit SecY	92.1	28.7	34.4
MGA_1162	LOCUS_11590	sequence1:892213..892479(-)	internal_stop_codon	892489..892491(-)		WP_002356221.1	50S ribosomal protein L15	95.5	56.8	44.0
MGA_1164	LOCUS_11610	sequence1:892842..893471(-)	partial			WP_011166896.1	30S ribosomal protein S5	90.0	73.6	46.3
MGA_1168	LOCUS_11650	sequence1:895019..895318(-)	internal_stop_codon	895334..895336(-)		WP_003567542.1	50S ribosomal protein L5	98.0	53.9	59.8
MGA_1169	LOCUS_11660	sequence1:895334..895564(-)	internal_stop_codon	895334..895336(-)		WP_012258243.1	50S ribosomal protein L5	97.4	41.1	54.1
MGA_1176	LOCUS_11730	sequence1:899116..899601(-)	internal_stop_codon	898843..898845(-),899116..899118(-)		WP_000511583.1	50S ribosomal protein L2	100.0	58.0	72.0
MGA_1190	LOCUS_11870	sequence1:908328..910226(+)	partial			WP_011948591.1	ABC transporter ATP-binding protein/permease	61.1	49.4	27.1
MGA_1207	LOCUS_12040	sequence1:924370..924717(-)	internal_stop_codon	924796..924798(-)		WP_017532717.1	PTS mannitol transporter subunit IICB	85.2	23.8	48.0
MGA_1208	LOCUS_12050	sequence1:924796..925041(-)	internal_stop_codon	924796..924798(-),925285..925287(-)		WP_017532717.1	PTS mannitol transporter subunit IICB	96.3	19.2	59.0
MGA_1209	LOCUS_12060	sequence1:925444..925680(-)	internal_stop_codon	925444..925446(-),925285..925287(-)		WP_017532717.1	PTS mannitol transporter subunit IICB	59.0	11.3	56.5
MGA_1215	LOCUS_12120	sequence1:930089..930688(+)	internal_stop_codon	930686..930688(+),930038..930040(+),930836..930838(+)		WP_002263383.1	Eco57I restriction-modification methylase domain-containing protein	89.4	37.3	31.6
MGA_1221	LOCUS_12180	sequence1:934245..935165(-)	internal_stop_codon	935277..935279(-)		WP_013447641.1	translation elongation factor 4	98.0	50.0	61.3
MGA_1222	LOCUS_12190	sequence1:935277..936041(-)	internal_stop_codon	935277..935279(-)		WP_011183371.1	translation elongation factor 4	100.0	43.2	64.9
MGA_1225	LOCUS_12220	sequence1:937267..937560(-)	internal_stop_codon	937267..937269(-),937033..937035(-),937765..937767(-),937072..937074(-),937645..937647(-)		WP_012869537.1	ribosome biogenesis GTPase Der	94.8	21.9	47.4
MGA_1226	LOCUS_12230	sequence1:937765..937905(-)	internal_stop_codon	937765..937767(-),937645..937647(-)		WP_001831042.1	ribosome biogenesis GTPase Der	93.5	9.9	69.8
MGA_1227	LOCUS_12240	sequence1:937925..938116(-)	internal_stop_codon	938171..938173(-)		WP_003358949.1	(d)CMP kinase	81.0	23.5	51.0
MGA_1228	LOCUS_12250	sequence1:938171..938404(-)	internal_stop_codon	938417..938419(-),938171..938173(-)		WP_011460204.1	(d)CMP kinase	89.6	29.3	37.7
MGA_1229	LOCUS_12260	sequence1:938417..938608(-)	internal_stop_codon	938417..938419(-),938171..938173(-)		WP_010965153.1	(d)CMP kinase	79.4	23.0	58.0
MGA_1231	LOCUS_12280	sequence1:939943..941106(-)	internal_stop_codon	941107..941109(-),941128..941130(-)		WP_011183314.1	molecular chaperone DnaK	97.4	63.7	54.9
MGA_1232	LOCUS_12290	sequence1:941128..941739(-)	internal_stop_codon	941107..941109(-),941128..941130(-)		WP_011183314.1	molecular chaperone DnaK	100.0	34.3	70.4
MGA_1239	LOCUS_12360	sequence1:948144..948977(-)	internal_stop_codon	948099..948101(-),948117..948119(-),948144..948146(-),948087..948089(-),949002..949004(-)		WP_008363296.1	DUF4011 domain-containing protein	100.0	17.6	41.3
MGA_1240	LOCUS_12370	sequence1:949002..949481(-)	internal_stop_codon	949536..949538(-),949002..949004(-)		WP_008363296.1	DUF4011 domain-containing protein	98.7	10.1	43.0
MGA_1242	LOCUS_12390	sequence1:950640..951176(-)	internal_stop_codon	950577..950579(-),950640..950642(-)		WP_011166830.1	DUF4011 domain-containing protein	89.9	25.0	46.0
MGA_1244	LOCUS_12410	sequence1:952185..952847(-)	internal_stop_codon	952854..952856(-),952917..952919(-)		WP_011166856.1	tyrosine--tRNA ligase	98.2	52.4	36.9
MGA_1245	LOCUS_12420	sequence1:952917..953429(-)	internal_stop_codon	952854..952856(-),952917..952919(-)		WP_011166856.1	tyrosine--tRNA ligase	96.5	40.3	46.7
MGA_1246	LOCUS_12430	sequence1:953738..954280(-)	internal_stop_codon	953738..953740(-)		WP_011166314.1	deoxyribonuclease IV	99.4	64.0	44.3
MGA_1247	LOCUS_12440	sequence1:955054..955590(-)	internal_stop_codon	955618..955620(-),955615..955617(-)		WP_014207479.1	RNA polymerase sigma factor RpoD	99.4	26.4	44.1
MGA_1248	LOCUS_12450	sequence1:955618..955824(-)	internal_stop_codon	955618..955620(-),955615..955617(-)		WP_023173878.1	RNA polymerase sigma factor RpoD	91.2	15.4	62.9
MGA_1251	LOCUS_12480	sequence1:957605..958591(-)	internal_stop_codon	958667..958669(-)		WP_010964611.1	DNA primase	92.1	49.0	31.7
MGA_1252	LOCUS_12490	sequence1:958667..958891(-)	internal_stop_codon	958667..958669(-)		WP_164919807.1	DNA primase	93.2	10.9	47.8
MGA_1253	LOCUS_12500	sequence1:958884..959108(-)	internal_stop_codon	959112..959114(-)		WP_010869726.1	glycine--tRNA ligase	93.2	12.0	44.9
MGA_1254	LOCUS_12510	sequence1:959112..959354(-)	internal_stop_codon	959112..959114(-),959406..959408(-)		WP_011183165.1	glycine--tRNA ligase	96.2	17.7	42.0
MGA_1255	LOCUS_12520	sequence1:959406..959759(-)	internal_stop_codon	959406..959408(-),959835..959837(-)		WP_003857047.1	glycine--tRNA ligase	99.1	25.2	50.9
MGA_1256	LOCUS_12530	sequence1:959835..960251(-)	internal_stop_codon	959835..959837(-)		WP_164927177.1	glycine--tRNA ligase	73.9	20.9	46.1
MGA_1258	LOCUS_12550	sequence1:961679..962245(-)	internal_stop_codon	962459..962461(-)		WP_003644498.1	translation elongation factor Ts	94.1	59.2	42.4
MGA_1260	LOCUS_12570	sequence1:962603..963157(-)	internal_stop_codon	963413..963415(-),963191..963193(-)		WP_000111480.1	30S ribosomal protein S2	66.3	40.5	43.4
MGA_1268	LOCUS_12650	sequence1:967256..967639(-)	internal_stop_codon	967640..967642(-),967256..967258(-)		WP_010874957.1	F0F1 ATP synthase subunit alpha	100.0	24.5	81.1
MGA_1269	LOCUS_12660	sequence1:967640..968383(-)	internal_stop_codon	967640..967642(-)		WP_003356056.1	F0F1 ATP synthase subunit alpha	99.2	48.6	57.6
MGA_1279	LOCUS_12760	sequence1:976136..976303(-)	internal_stop_codon	976130..976132(-),975887..975889(-),976136..976138(-)		WP_013448152.1	phosphotransferase	96.4	22.3	56.6
MGA_1280	LOCUS_12770	sequence1:976537..977406(+)	internal_stop_codon	977404..977406(+)		WP_003245789.1	recombinase RecA	97.9	81.3	61.1
MGA_1282	LOCUS_12790	sequence1:978253..978405(+)	internal_stop_codon	978217..978219(+),978403..978405(+),978115..978117(+),978481..978483(+)		WP_002304589.1	cardiolipin synthase	88.0	9.1	56.8
MGA_1283	LOCUS_12800	sequence1:978682..979098(+)	partial			WP_128805580.1	cardiolipin synthase	69.6	24.4	35.4
MGA_1286	LOCUS_12830	sequence1:979940..981439(+)	partial			WP_011476190.1	ribonuclease R	100.0	63.2	37.0
MGA_1289	LOCUS_12860	sequence1:984112..984399(-)	internal_stop_codon	983971..983973(-),984652..984654(-),984112..984114(-),984637..984639(-),983995..983997(-),984511..984513(-),984040..984042(-),983860..983862(-)		WP_001830138.1	isoleucine--tRNA ligase	98.9	10.3	60.6
MGA_1290	LOCUS_12870	sequence1:985345..986295(-)	internal_stop_codon	986323..986325(-)		WP_012027057.1	DNA gyrase subunit A	57.0	20.8	31.7
MGA_1291	LOCUS_12880	sequence1:986323..987537(-)	internal_stop_codon	987691..987693(-),987562..987564(-),986323..986325(-)		WP_010989723.1	DNA topoisomerase IV subunit A	99.0	48.8	44.6
MGA_1292	LOCUS_12890	sequence1:987691..987849(-)	internal_stop_codon	987691..987693(-),987562..987564(-)		WP_120770066.1	DNA topoisomerase IV subunit A	86.5	5.5	73.3
MGA_1293	LOCUS_12900	sequence1:988130..989599(-)	internal_stop_codon	988034..988036(-),989657..989659(-),987914..987916(-),988130..988132(-)		WP_011166694.1	DNA topoisomerase IV subunit B	100.0	75.7	46.6
MGA_1294	LOCUS_12910	sequence1:989927..990196(+)	internal_stop_codon	990194..990196(+)		WP_010964028.1	type I glyceraldehyde-3-phosphate dehydrogenase	100.0	24.9	62.9
MGA_1295	LOCUS_12920	sequence1:990461..990871(+)	internal_stop_codon	990194..990196(+),990869..990871(+)		WP_010874786.1	type I glyceraldehyde-3-phosphate dehydrogenase	99.3	40.1	64.4
MGA_1297	LOCUS_12940	sequence1:993003..993398(-)	internal_stop_codon	992778..992780(-),992958..992960(-),993003..993005(-)		WP_011073421.1	IS256-like element ISSod4 family transposase	84.0	25.5	44.1
MGA_1298	LOCUS_12950	sequence1:994864..995280(+)	internal_stop_codon	995278..995280(+),995413..995415(+)		WP_011183382.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	100.0	43.8	43.9
MGA_1299	LOCUS_12960	sequence1:995536..995850(+)	internal_stop_codon	995278..995280(+),995413..995415(+)		WP_011183382.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	74.0	24.9	46.2
MGA_1309	LOCUS_13060	sequence1:1002911..1003510(-)	internal_stop_codon	1003646..1003648(-)		WP_011167153.1	DNA-directed RNA polymerase subunit beta'	86.9	13.8	48.6
MGA_1310	LOCUS_13070	sequence1:1003646..1004404(-)	internal_stop_codon	1003646..1003648(-),1004483..1004485(-)		WP_011183495.1	DNA-directed RNA polymerase subunit beta'	97.2	18.5	57.1
MGA_1311	LOCUS_13080	sequence1:1004483..1004695(-)	internal_stop_codon	1004483..1004485(-)		WP_011836355.1	DNA-directed RNA polymerase subunit beta'	88.6	5.1	46.8
MGA_1312	LOCUS_13090	sequence1:1004711..1005616(-)	internal_stop_codon	1005761..1005763(-),1005674..1005676(-)		WP_000228757.1	DNA-directed RNA polymerase subunit beta'	71.4	17.4	47.2
MGA_1313	LOCUS_13100	sequence1:1005761..1006012(-)	internal_stop_codon	1005674..1005676(-),1005761..1005763(-),1006058..1006060(-)		WP_010931850.1	DNA-directed RNA polymerase subunit beta'	100.0	5.6	68.7
MGA_1314	LOCUS_13110	sequence1:1006058..1006375(-)	internal_stop_codon	1006058..1006060(-)		WP_005904068.1	DNA-directed RNA polymerase subunit beta'	88.6	6.2	46.2
MGA_1316	LOCUS_13130	sequence1:1007580..1008050(-)	internal_stop_codon	1007580..1007582(-),1008228..1008230(-)		WP_011183496.1	DNA-directed RNA polymerase subunit beta	99.4	12.1	71.0
MGA_1317	LOCUS_13140	sequence1:1008228..1008386(-)	internal_stop_codon	1008525..1008527(-),1008228..1008230(-)		WP_011015993.1	DNA-directed RNA polymerase subunit beta	100.0	4.4	57.7
MGA_1318	LOCUS_13150	sequence1:1008525..1008950(-)	internal_stop_codon	1009107..1009109(-),1008525..1008527(-)		WP_011167152.1	DNA-directed RNA polymerase subunit beta	99.3	10.8	60.7
MGA_1319	LOCUS_13160	sequence1:1009107..1009733(-)	internal_stop_codon	1009107..1009109(-)		WP_011167152.1	DNA-directed RNA polymerase subunit beta	98.1	15.7	53.4
MGA_1320	LOCUS_13170	sequence1:1009749..1010339(-)	internal_stop_codon	1009749..1009751(-)		WP_010874872.1	DNA-directed RNA polymerase subunit beta	56.6	7.7	32.4
MGA_1321	LOCUS_13180	sequence1:1010340..1010873(-)	internal_stop_codon	1010340..1010342(-)		WP_011125790.1	DNA-directed RNA polymerase subunit beta	84.2	13.1	38.9
MGA_1336	LOCUS_13330	sequence1:1019578..1020516(-)	internal_stop_codon	1019404..1019406(-),1019578..1019580(-)		WP_084400767.1	DEAD/DEAH box helicase family protein	93.9	46.5	41.4
MGA_1337	LOCUS_13340	sequence1:1020715..1021005(-)	internal_stop_codon	1021048..1021050(-)		WP_020862862.1	DUF31 family protein	82.3	9.6	42.7
MGA_1341	LOCUS_13380	sequence1:1023957..1024412(-)	internal_stop_codon	1023726..1023728(-),1023957..1023959(-),1023834..1023836(-)		WP_011166804.1	putative immunoglobulin-blocking virulence protein	97.4	19.9	37.1
MGA_1350	LOCUS_13470	sequence1:1030917..1031588(-)	partial			WP_071540979.1	DNA adenine methylase	94.6	57.1	52.8
MGA_1352	LOCUS_13490	sequence1:1035246..1035410(+)	partial			WP_102407668.1	KilA-N domain-containing protein	87.0	16.8	59.6
MGA_1358	LOCUS_13550	sequence1:1041191..1041649(-)	internal_stop_codon	1041653..1041655(-)		WP_011166415.1	Eco47II family restriction endonuclease	99.3	59.4	64.9
MGA_1359	LOCUS_13560	sequence1:1041653..1041949(-)	internal_stop_codon	1041653..1041655(-)		WP_011166415.1	Eco47II family restriction endonuclease	94.9	36.6	62.4
MGA_1360	LOCUS_13570	sequence1:1041936..1042229(-)	internal_stop_codon	1042281..1042283(-),1042491..1042493(-)		WP_011166416.1	DNA cytosine methyltransferase	94.8	27.0	76.1
MGA_1361	LOCUS_13580	sequence1:1042491..1042964(-)	internal_stop_codon	1042281..1042283(-),1042491..1042493(-)		WP_011166416.1	DNA cytosine methyltransferase	100.0	46.0	70.1
MGA_1395	LOCUS_13920	sequence1:1068975..1069214(+)	partial			WP_011182983.1	ECF transporter S component	81.0	19.7	40.6
MGA_1399	LOCUS_13960	sequence1:1072363..1072941(+)	internal_stop_codon	1073194..1073196(+),1073089..1073091(+),1072939..1072941(+),1073164..1073166(+),1073044..1073046(+),1072255..1072257(+),1072351..1072353(+),1073065..1073067(+),1072219..1072221(+),1073086..1073088(+)		WP_011166500.1	valine--tRNA ligase	96.9	21.4	46.5
MGA_1400	LOCUS_13970	sequence1:1073323..1073556(+)	internal_stop_codon	1073194..1073196(+),1073089..1073091(+),1073293..1073295(+),1073554..1073556(+),1073164..1073166(+),1073311..1073313(+),1073065..1073067(+),1073086..1073088(+),1073575..1073577(+)		WP_002287953.1	valine--tRNA ligase	100.0	8.7	64.9
MGA_1401	LOCUS_13980	sequence1:1073644..1074348(+)	internal_stop_codon	1073575..1073577(+),1073641..1073643(+),1073554..1073556(+)		WP_000425353.1	valine--tRNA ligase	84.2	25.9	25.7