{ "tc_result": [ { "organism_name": "Vagococcus fessus", "strain": "strain=CCUG 41755", "accession": "GCA_003987565.1", "taxid": 120370, "species_taxid": 120370, "relation_to_type": "type", "validated": true, "ani": 90.3578, "matched_fragments": 618, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vagococcus coleopterorum", "strain": "strain=HDW17A", "accession": "GCA_011303955.1", "taxid": 2714946, "species_taxid": 2714946, "relation_to_type": "type", "validated": true, "ani": 79.9057, "matched_fragments": 177, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vagococcus zengguangii", "strain": "strain=MN-17", "accession": "GCA_005145005.1", "taxid": 2571750, "species_taxid": 2571750, "relation_to_type": "type", "validated": true, "ani": 78.6341, "matched_fragments": 95, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vagococcus salmoninarum", "strain": "strain=NCFB 2777", "accession": "GCA_003987495.1", "taxid": 2739, "species_taxid": 2739, "relation_to_type": "type", "validated": true, "ani": 78.387, "matched_fragments": 153, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vagococcus allomyrinae", "strain": "strain=BWB3-3", "accession": "GCA_017829975.1", "taxid": 2794353, "species_taxid": 2794353, "relation_to_type": "type", "validated": true, "ani": 78.2795, "matched_fragments": 104, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vagococcus teuberi", "strain": "strain=DSM 21459", "accession": "GCA_001870205.1", "taxid": 519472, "species_taxid": 519472, "relation_to_type": "type", "validated": true, "ani": 78.2771, "matched_fragments": 83, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vagococcus xieshaowenii", "strain": "strain=personal::cf-49", "accession": "GCA_004792515.1", "taxid": 2562451, "species_taxid": 2562451, "relation_to_type": "type", "validated": true, "ani": 78.0521, "matched_fragments": 108, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vagococcus hydrophili", "strain": "strain=HDW17B", "accession": "GCA_011304195.1", "taxid": 2714947, "species_taxid": 2714947, "relation_to_type": "type", "validated": true, "ani": 77.8093, "matched_fragments": 121, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vagococcus fluvialis", "strain": "strain=DSM 5731", "accession": "GCA_003337315.1", "taxid": 2738, "species_taxid": 2738, "relation_to_type": "type", "validated": true, "ani": 77.7931, "matched_fragments": 115, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vagococcus fluvialis", "strain": "strain=NCDO 2497", "accession": "GCA_003987575.1", "taxid": 2738, "species_taxid": 2738, "relation_to_type": "type", "validated": true, "ani": 77.7895, "matched_fragments": 116, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus phoeniculicola", "strain": "strain=ATCC BAA-412", "accession": "GCA_000407505.1", "taxid": 154621, "species_taxid": 154621, "relation_to_type": "type", "validated": true, "ani": 77.5938, "matched_fragments": 71, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus thailandicus", "strain": "strain=NBRC 101867", "accession": "GCA_007989705.1", "taxid": 417368, "species_taxid": 417368, "relation_to_type": "type", "validated": true, "ani": 77.5772, "matched_fragments": 73, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus phoeniculicola", "strain": "strain=ATCC BAA-412", "accession": "GCA_000394035.1", "taxid": 154621, "species_taxid": 154621, "relation_to_type": "type", "validated": true, "ani": 77.5669, "matched_fragments": 72, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus thailandicus", "strain": "strain=DSM 21767", "accession": "GCA_001886265.1", "taxid": 417368, "species_taxid": 417368, "relation_to_type": "type", "validated": true, "ani": 77.5285, "matched_fragments": 72, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Isobaculum melis", "strain": "strain=DSM 13760", "accession": "GCA_900111355.1", "taxid": 142588, "species_taxid": 142588, "relation_to_type": "type", "validated": true, "ani": 77.5234, "matched_fragments": 78, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vagococcus bubulae", "strain": "strain=SS1994", "accession": "GCA_003950315.1", "taxid": 1977868, "species_taxid": 1977868, "relation_to_type": "type", "validated": true, "ani": 77.4807, "matched_fragments": 92, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus alcedinis", "strain": "strain=CCM 8433", "accession": "GCA_014635985.1", "taxid": 1274384, "species_taxid": 1274384, "relation_to_type": "type", "validated": true, "ani": 77.303, "matched_fragments": 66, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus lactis", "strain": "strain=CCM 8412", "accession": "GCA_015751045.1", "taxid": 357441, "species_taxid": 357441, "relation_to_type": "type", "validated": true, "ani": 77.3008, "matched_fragments": 59, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus ureilyticus", "strain": "strain=CCUG 48799", "accession": "GCA_002806915.1", "taxid": 1131292, "species_taxid": 1131292, "relation_to_type": "type", "validated": true, "ani": 77.2297, "matched_fragments": 70, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus ureilyticus", "strain": "strain=LMG 26676", "accession": "GCA_001730315.1", "taxid": 1131292, "species_taxid": 1131292, "relation_to_type": "type", "validated": true, "ani": 77.2116, "matched_fragments": 70, "total_fragments": 773, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_003987565.1", "gtdb_species": "s__Vagococcus_D fessus", "ani": 90.3321, "matched_fragments": 619, "total_fragments": 773, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Vagococcaceae;g__Vagococcus_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_011303955.1", "gtdb_species": "s__Vagococcus_D coleopterorum", "ani": 79.9057, "matched_fragments": 177, "total_fragments": 773, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Vagococcaceae;g__Vagococcus_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003987495.1", "gtdb_species": "s__Vagococcus_D salmoninarum", "ani": 78.387, "matched_fragments": 153, "total_fragments": 773, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Vagococcaceae;g__Vagococcus_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.18", "min_intra_species_ani": "98.18", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.88", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001870205.1", "gtdb_species": "s__Vagococcus teuberi", "ani": 78.2771, "matched_fragments": 83, "total_fragments": 773, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Vagococcaceae;g__Vagococcus", "ani_circumscription_radius": 95.6178, "mean_intra_species_ani": "98.63", "min_intra_species_ani": "98.63", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_004792515.1", "gtdb_species": "s__Vagococcus_A sp004792515", "ani": 78.0523, "matched_fragments": 108, "total_fragments": 773, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Vagococcaceae;g__Vagococcus_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003337315.1", "gtdb_species": "s__Vagococcus fluvialis", "ani": 77.7931, "matched_fragments": 115, "total_fragments": 773, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Vagococcaceae;g__Vagococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.30", "min_intra_species_ani": "97.38", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.88", "num_clustered_genomes": 13, "status": "-" }, { "accession": "GCF_003462485.1", "gtdb_species": "s__Vagococcus sp003462485", "ani": 77.7899, "matched_fragments": 83, "total_fragments": 773, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Vagococcaceae;g__Vagococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_011304195.1", "gtdb_species": "s__Vagococcus hydrophili", "ani": 77.7815, "matched_fragments": 122, "total_fragments": 773, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Vagococcaceae;g__Vagococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001742285.1", "gtdb_species": "s__Enterococcus rivorum", "ani": 77.6588, "matched_fragments": 78, "total_fragments": 773, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001885765.1", "gtdb_species": "s__Enterococcus_I aquimarinus", "ani": 77.6532, "matched_fragments": 57, "total_fragments": 773, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_I", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.10", "min_intra_species_ani": "98.04", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.95", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_900111355.1", "gtdb_species": "s__Isobaculum melis", "ani": 77.5604, "matched_fragments": 78, "total_fragments": 773, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Isobaculum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000407505.1", "gtdb_species": "s__Enterococcus_B phoeniculicola", "ani": 77.5496, "matched_fragments": 72, "total_fragments": 773, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_001886265.1", "gtdb_species": "s__Enterococcus_B thailandicus", "ani": 77.5285, "matched_fragments": 72, "total_fragments": 773, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.46", "min_intra_species_ani": "99.20", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.90", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_900163795.1", "gtdb_species": "s__Vagococcus fluvialis_A", "ani": 77.492, "matched_fragments": 114, "total_fragments": 773, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Vagococcaceae;g__Vagococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003950315.1", "gtdb_species": "s__Vagococcus bubulae", "ani": 77.4807, "matched_fragments": 92, "total_fragments": 773, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Vagococcaceae;g__Vagococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001730315.1", "gtdb_species": "s__Enterococcus ureilyticus", "ani": 77.2116, "matched_fragments": 70, "total_fragments": 773, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.76", "min_intra_species_ani": "99.29", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.94", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_009933335.1", "gtdb_species": "s__Enterococcus_F sp009933335", "ani": 77.1103, "matched_fragments": 81, "total_fragments": 773, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_F", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000746825.1", "gtdb_species": "s__Carnobacterium_A inhibens", "ani": 76.9533, "matched_fragments": 62, "total_fragments": 773, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Carnobacterium_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.16", "min_intra_species_ani": "98.07", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.88", "num_clustered_genomes": 3, "status": "-" } ] }