# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_69	LOCUS_00660	sequence005:12114..12308(+)	partial			WP_011860922.1	hypothetical protein	68.8	68.8	97.7
MGA_119	LOCUS_01160	sequence006:248..685(-)	partial			WP_011860940.1	aminotransferase class V-fold PLP-dependent enzyme	100.0	39.7	99.3
MGA_141	LOCUS_01380	sequence006:30783..31151(+)	internal_stop_codon	31149..31151(+),31161..31163(+),31158..31160(+)		WP_012099537.1	PTS glucitol/sorbitol transporter subunit IIB	96.7	35.3	63.6
MGA_142	LOCUS_01390	sequence006:31176..31742(+)	internal_stop_codon	31149..31151(+),31161..31163(+),31158..31160(+)		WP_012099537.1	PTS glucitol/sorbitol transporter subunit IIB	98.4	55.7	76.9
MGA_187	LOCUS_01840	sequence006:78482..78826(+)	frameshift		78811	WP_003418487.1	universal stress protein	98.2	82.4	99.1
MGA_295	LOCUS_02920	sequence006:201517..201942(+)	internal_stop_codon	201493..201495(+)		WP_011861061.1	diguanylate cyclase	100.0	11.9	99.3
MGA_331	LOCUS_03280	sequence006:240903..241352(+)	frameshift		241322,241316	WP_009895992.1	hypothetical protein	95.3	39.3	87.3
MGA_332	LOCUS_03290	sequence006:241420..241986(+)	frameshift		241322,241316	WP_009895992.1	hypothetical protein	100.0	52.1	99.5
MGA_343	LOCUS_03370	sequence009:11540..12913(+)	frameshift		12907,12901,12943	WP_011861079.1	helicase-exonuclease AddAB subunit AddA	99.3	35.6	100.0
MGA_344	LOCUS_03380	sequence009:12953..15364(+)	frameshift		12907,12901,12943	WP_011861079.1	helicase-exonuclease AddAB subunit AddA	100.0	63.0	95.1
MGA_368	LOCUS_03620	sequence009:40102..40281(+)	partial			WP_003418911.1	hypothetical protein	74.6	74.6	86.4
MGA_420	LOCUS_04140	sequence009:92447..92755(+)	frameshift		92704	WP_003419045.1	electron transport complex subunit E	85.3	44.2	94.3
MGA_421	LOCUS_04150	sequence009:92815..93039(+)	frameshift		92704	WP_003419045.1	electron transport complex subunit E	100.0	37.6	93.2
MGA_437	LOCUS_04310	sequence009:107064..107783(+)	partial			WP_011861129.1	transglutaminase-like domain-containing protein	100.0	66.4	95.0
MGA_454	LOCUS_04480	sequence009:123196..123966(+)	frameshift		123951	WP_003438092.1	FAD-binding protein	99.6	62.8	99.2
MGA_455	LOCUS_04490	sequence009:124025..124417(+)	frameshift		123945	WP_003438092.1	FAD-binding protein	100.0	32.0	99.2
MGA_517	LOCUS_05110	sequence009:184203..184475(+)	partial			WP_009889019.1	hypothetical protein	100.0	64.7	100.0
MGA_575	LOCUS_05690	sequence009:244719..244967(-)	partial			WP_009902402.1	YwaF family protein	100.0	36.9	98.8
MGA_587	LOCUS_05810	sequence009:258516..259184(+)	partial			WP_011016831.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	99.5	67.9	37.6
MGA_589	LOCUS_05830	sequence010:1113..1385(+)	partial			WP_053104374.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	81.1	22.8	50.7
MGA_694	LOCUS_06880	sequence010:111451..111678(-)	frameshift		111291,111471	WP_011860983.1	site-specific integrase	96.0	19.4	54.2
MGA_718	LOCUS_07120	sequence010:140047..140640(+)	partial			WP_011861887.1	sigma 54-interacting transcriptional regulator	99.5	30.8	29.8
MGA_742	LOCUS_07360	sequence010:161653..162276(-)	frameshift		162323	WP_011861222.1	DUF5808 domain-containing protein	88.4	50.4	97.8
MGA_743	LOCUS_07370	sequence010:162309..162743(-)	frameshift		162323	WP_011861222.1	DUF5808 domain-containing protein	91.7	36.4	90.9
MGA_775	LOCUS_07690	sequence010:196432..198192(+)	frameshift		198183	WP_003434104.1	PAS domain-containing sensor histidine kinase	99.7	64.0	97.3
MGA_776	LOCUS_07700	sequence010:198267..199169(+)	frameshift		198180	WP_003434104.1	PAS domain-containing sensor histidine kinase	100.0	32.9	98.7
MGA_783	LOCUS_07770	sequence010:205843..206250(+)	partial			WP_004454106.1	murein biosynthesis integral membrane protein MurJ	98.5	26.1	48.1
MGA_804	LOCUS_07960	sequence011:20121..21572(-)	frameshift		21571	WP_003439379.1	ferrous iron transport protein B	99.8	68.3	97.3
MGA_805	LOCUS_07970	sequence011:21521..22240(-)	frameshift		21571	WP_003439379.1	ferrous iron transport protein B	96.2	32.6	97.8
MGA_866	LOCUS_08580	sequence011:91331..91498(+)	frameshift		91489	WP_003429993.1	homoserine dehydrogenase	96.4	13.1	94.3
MGA_867	LOCUS_08590	sequence011:91548..92549(+)	frameshift		91489	WP_003429993.1	homoserine dehydrogenase	100.0	82.2	100.0
MGA_900	LOCUS_08920	sequence011:122970..123326(+)	internal_stop_codon	123324..123326(+)		WP_009896765.1	hypothetical protein	99.2	43.3	96.6
MGA_901	LOCUS_08930	sequence011:123369..123782(+)	internal_stop_codon	123324..123326(+)		WP_009896765.1	hypothetical protein	100.0	50.7	87.6
MGA_1016	LOCUS_10070	sequence011:250486..250854(+)	partial			WP_004454432.1	hydantoinase/oxoprolinase family protein	100.0	23.7	100.0
MGA_1017	LOCUS_10080	sequence012:208..1320(+)	partial			WP_004454432.1	hydantoinase/oxoprolinase family protein	100.0	72.0	99.7
MGA_1028	LOCUS_10190	sequence012:9217..9435(-)	frameshift		9434	WP_011948717.1	AraC family transcriptional regulator	94.4	27.0	52.9
MGA_1094	LOCUS_10810	sequence014:4396..4554(+)	frameshift		4545	WP_003439543.1	DUF4253 domain-containing protein	98.1	21.9	100.0
MGA_1095	LOCUS_10820	sequence014:4557..5096(+)	frameshift		4545	WP_003439543.1	DUF4253 domain-containing protein	100.0	76.8	97.2
MGA_1103	LOCUS_10900	sequence014:13856..14362(+)	internal_stop_codon	14360..14362(+)		WP_011861334.1	BtrH N-terminal domain-containing protein	100.0	48.3	97.0
MGA_1104	LOCUS_10910	sequence014:14408..14902(+)	internal_stop_codon	14360..14362(+)		WP_011861334.1	BtrH N-terminal domain-containing protein	100.0	47.1	98.2
MGA_1127	LOCUS_11140	sequence014:37847..38044(+)	internal_stop_codon	38042..38044(+)		WP_010890714.1	multidrug efflux MFS transporter	100.0	16.3	67.7
MGA_1128	LOCUS_11150	sequence014:38078..39049(+)	internal_stop_codon	38042..38044(+)		WP_010890714.1	multidrug efflux MFS transporter	96.3	77.4	58.8
MGA_1163	LOCUS_11500	sequence014:79661..83803(+)	partial			WP_011948729.1	SdrD B-like domain-containing protein	46.7	54.0	24.7
MGA_1177	LOCUS_11640	sequence015:7185..7391(+)	partial			WP_009902829.1	signal peptidase II	85.3	32.6	98.3
MGA_1222	LOCUS_12090	sequence016:13150..13398(-)	partial			WP_041272371.1	VOC family protein	67.1	45.0	62.1
MGA_1262	LOCUS_12490	sequence016:58489..58719(-)	internal_stop_codon	58489..58491(-)		WP_003428797.1	helix-turn-helix domain-containing protein	100.0	64.4	98.7
MGA_1270	LOCUS_12570	sequence016:67255..67518(-)	frameshift		67281	WP_011861413.1	hypothetical protein	93.1	61.4	92.6
MGA_1272	LOCUS_12590	sequence016:69091..69273(-)	internal_stop_codon	69091..69093(-)		WP_011861577.1	BlaI/MecI/CopY family transcriptional regulator	100.0	47.2	91.7
MGA_1278	LOCUS_12640	sequence017:657..839(+)	partial			WP_011860983.1	site-specific integrase	88.3	14.2	66.0
MGA_1279	LOCUS_12650	sequence017:910..1092(+)	frameshift		1077	WP_011861415.1	lipoprotein	80.0	17.1	85.4
MGA_1280	LOCUS_12660	sequence017:1320..1754(+)	frameshift		1077	WP_011861415.1	lipoprotein	100.0	51.2	99.3
MGA_1300	LOCUS_12860	sequence017:20067..20207(-)	partial			WP_009889993.1	hypothetical protein	67.4	67.4	100.0
MGA_1353	LOCUS_13380	sequence018:27750..27965(-)	frameshift		27788	WP_009902980.1	hypothetical protein	84.5	38.0	85.0
MGA_1448	LOCUS_14330	sequence018:141156..141278(+)	frameshift		141275	WP_011861473.1	hypothetical protein	100.0	28.2	97.5
MGA_1449	LOCUS_14340	sequence018:141250..141579(+)	frameshift		141275	WP_011861473.1	hypothetical protein	77.1	59.2	84.5
MGA_1464	LOCUS_14490	sequence018:156374..156565(-)	internal_stop_codon	156584..156586(-)		WP_011948301.1	dicarboxylate/amino acid:cation symporter	81.0	12.3	54.9
MGA_1465	LOCUS_14500	sequence018:156584..157645(-)	internal_stop_codon	156584..156586(-)		WP_011948301.1	dicarboxylate/amino acid:cation symporter	98.6	83.9	45.3
MGA_1480	LOCUS_14650	sequence018:175241..175381(-)	frameshift		175422	WP_011861486.1	hypothetical protein	100.0	28.2	100.0
MGA_1481	LOCUS_14660	sequence018:175408..175731(-)	frameshift		175422	WP_011861486.1	hypothetical protein	96.3	63.2	100.0
MGA_1488	LOCUS_14730	sequence018:184026..185468(-)	partial			WP_011861148.1	cell wall-binding protein Cwp26	64.2	65.3	55.8
MGA_1491	LOCUS_14760	sequence018:188229..189935(-)	internal_stop_codon	190008..190010(-)		WP_011861490.1	acetate--CoA ligase family protein	100.0	81.3	98.9
MGA_1492	LOCUS_14770	sequence018:190008..190328(-)	internal_stop_codon	190008..190010(-)		WP_011861490.1	acetate--CoA ligase family protein	100.0	15.2	90.6
MGA_1516	LOCUS_15010	sequence018:215115..215930(-)	partial			WP_011860746.1	site-specific integrase	99.6	67.7	70.4
MGA_1517	LOCUS_15020	sequence018:216031..216471(+)	internal_stop_codon	216469..216471(+)		WP_010989671.1	ATP-binding protein	100.0	17.9	94.5
MGA_1525	LOCUS_15100	sequence018:221559..221912(+)	partial			WP_011861092.1	site-specific integrase	98.3	29.0	74.8
MGA_1604	LOCUS_15890	sequence019:219..419(-)	frameshift,internal_stop_codon	169..171(-)	184,254	WP_009897458.1	BlaI/MecI/CopY family transcriptional regulator	92.4	48.4	68.9
MGA_1618	LOCUS_16030	sequence020:6733..7239(+)	frameshift		7212	WP_021381512.1	sensor histidine kinase	82.7	26.4	89.3
MGA_1619	LOCUS_16040	sequence020:7245..8321(+)	frameshift		7212	WP_021381512.1	sensor histidine kinase	100.0	67.5	96.6
MGA_1665	LOCUS_16480	sequence020:58982..59611(-)	internal_stop_codon	58982..58984(-)		WP_109982269.1	ABC transporter permease subunit	88.5	66.9	34.7
MGA_1688	LOCUS_16710	sequence020:81746..83029(-)	frameshift		83064	WP_004454681.1	GGDEF domain-containing protein	100.0	69.7	98.6
MGA_1689	LOCUS_16720	sequence020:83008..83586(-)	frameshift		83061	WP_004454681.1	GGDEF domain-containing protein	97.9	30.7	95.2
MGA_1694	LOCUS_16770	sequence020:86719..87567(-)	partial			WP_011861541.1	M56 family metallopeptidase	86.5	63.6	81.6
MGA_1704	LOCUS_16870	sequence022:4192..4689(-)	frameshift		4194	WP_009903182.1	hypothetical protein	100.0	74.3	92.1
MGA_1713	LOCUS_16960	sequence022:11488..13350(+)	frameshift		13329	WP_011861544.1	type IA DNA topoisomerase	97.4	81.4	97.7
MGA_1714	LOCUS_16970	sequence022:13572..13715(+)	frameshift		13329	WP_011861544.1	type IA DNA topoisomerase	100.0	6.3	100.0
MGA_1719	LOCUS_17020	sequence022:20453..21280(-)	frameshift		21327	WP_117288021.1	IS3 family transposase	100.0	68.8	44.2
MGA_1761	LOCUS_17440	sequence022:62640..62819(-)	partial			WP_003416618.1	30S ribosomal protein S21	72.9	72.9	100.0
MGA_1834	LOCUS_18170	sequence022:151920..152045(+)	frameshift,internal_stop_codon	151741..151743(+)	151839	WP_011861579.1	site-specific integrase	100.0	11.0	100.0
MGA_1844	LOCUS_18270	sequence022:162530..162784(+)	frameshift		162694	WP_009903230.1	hypothetical protein	65.5	24.9	100.0
MGA_1845	LOCUS_18280	sequence022:162700..163197(+)	frameshift		162694	WP_009903230.1	hypothetical protein	100.0	74.7	99.4
MGA_1928	LOCUS_19100	sequence023:7056..7328(-)	partial			WP_009890831.1	hypothetical protein	70.0	70.0	58.7
MGA_1940	LOCUS_19220	sequence023:19534..21504(-)	partial			WP_011861618.1	hypothetical protein	67.5	68.0	98.9
MGA_1961	LOCUS_19430	sequence023:41290..41412(-)	frameshift		41316	WP_011861622.1	sigma-E processing peptidase SpoIIGA	82.5	11.7	100.0
MGA_2214	LOCUS_21930	sequence025:136096..136422(+)	frameshift		136401	WP_003439713.1	GGDEF domain-containing protein	97.2	27.3	91.4
MGA_2215	LOCUS_21940	sequence025:136479..137249(+)	frameshift		136401	WP_003439713.1	GGDEF domain-containing protein	100.0	66.7	93.4
MGA_2243	LOCUS_22220	sequence025:168787..169224(-)	internal_stop_codon	168787..168789(-)		WP_180703501.1	CRISPR-associated protein Cas4	88.3	74.0	81.2
MGA_2275	LOCUS_22540	sequence025:204272..204694(-)	partial			WP_010964914.1	DUF434 domain-containing protein	99.3	57.2	51.1
MGA_2312	LOCUS_22910	sequence025:249967..250605(-)	frameshift		250649	WP_003431390.1	N-acetylmuramic acid 6-phosphate etherase	100.0	69.7	99.5
MGA_2313	LOCUS_22920	sequence025:250644..250880(-)	frameshift		250649	WP_003431390.1	N-acetylmuramic acid 6-phosphate etherase	98.7	25.3	100.0
MGA_2321	LOCUS_23000	sequence025:258150..258902(-)	frameshift		258919	WP_011861796.1	FtsX-like permease family protein	100.0	39.4	97.6
MGA_2322	LOCUS_23010	sequence025:258899..260056(-)	frameshift		258916	WP_011861796.1	FtsX-like permease family protein	100.0	60.6	91.4
MGA_2372	LOCUS_23510	sequence025:320941..321171(-)	internal_stop_codon	320941..320943(-)		WP_011016088.1	IS1182-like element ISFnu2 family transposase	98.7	15.3	64.0
MGA_2388	LOCUS_23670	sequence025:340662..341459(-)	partial			WP_011861825.1	iron-containing alcohol dehydrogenase	100.0	69.2	97.4
MGA_2389	LOCUS_23680	sequence026:96..290(-)	partial			WP_011861825.1	iron-containing alcohol dehydrogenase	100.0	16.7	100.0
MGA_2404	LOCUS_23830	sequence026:19757..20029(-)	partial			WP_011861830.1	helix-turn-helix transcriptional regulator	100.0	63.8	97.8
MGA_2409	LOCUS_23880	sequence026:24991..25365(-)	partial			WP_012775211.1	DUF2500 domain-containing protein	83.1	74.4	35.0
MGA_2410	LOCUS_23890	sequence026:25593..25730(-)	partial			WP_011861830.1	helix-turn-helix transcriptional regulator	86.7	27.7	97.4
MGA_2438	LOCUS_24160	sequence027:1..1038(+)	partial			WP_005109921.1	DNA phosphorothioation system sulfurtransferase DndC	91.3	58.8	30.5
MGA_2446	LOCUS_24240	sequence027:12642..12803(+)	partial			WP_011861855.1	Fic family protein	90.6	19.2	66.7
MGA_2447	LOCUS_24250	sequence027:12890..13192(+)	frameshift		13159	WP_021373716.1	helix-turn-helix transcriptional regulator	80.0	26.6	65.0
MGA_2497	LOCUS_24740	sequence031:42622..43023(-)	partial			WP_011861885.1	collagen-like exosporium glycoprotein BclA2	100.0	23.8	85.0
MGA_2575	LOCUS_25490	sequence031:132638..132952(+)	frameshift		132946	WP_003417110.1	chromate transporter	99.0	60.6	100.0
MGA_2604	LOCUS_25770	sequence031:158363..158686(-)	frameshift		158377	WP_004454130.1	accessory gene regulator B family protein	97.2	54.2	49.0
MGA_2611	LOCUS_25840	sequence031:163740..165767(-)	partial			WP_011861926.1	collagen-like exosporium glycoprotein BclA3	32.4	32.7	71.2
MGA_2620	LOCUS_25930	sequence031:172501..172767(-)	partial			WP_011089070.1	Lrp/AsnC family transcriptional regulator	93.2	50.6	34.5
MGA_2645	LOCUS_26180	sequence032:13874..14026(-)	partial			WP_009898612.1	flavodoxin family protein	100.0	72.5	98.0
MGA_2646	LOCUS_26190	sequence032:14150..14368(+)	frameshift,internal_stop_codon	14366..14368(+)	14407	WP_011861911.1	TetR/AcrR family transcriptional regulator	100.0	38.1	51.4
MGA_2674	LOCUS_26460	sequence033:13101..13289(-)	partial			WP_011861951.1	conjugal transfer protein	98.4	62.2	63.9
MGA_2748	LOCUS_27200	sequence034:38292..38930(-)	internal_stop_codon	38943..38945(-)		WP_011986374.1	YjiH family protein	93.9	44.7	34.3
MGA_2770	LOCUS_27420	sequence034:57646..57906(-)	partial			WP_003421370.1	ATP synthase F0 subunit C	64.0	64.0	100.0
MGA_2804	LOCUS_27760	sequence034:89318..89974(-)	frameshift		90174	WP_011861983.1	type IV pilus twitching motility protein PilT	100.0	60.6	99.5
MGA_2805	LOCUS_27770	sequence034:90151..90399(-)	frameshift		90174	WP_011861983.1	type IV pilus twitching motility protein PilT	92.7	21.1	100.0
MGA_2813	LOCUS_27850	sequence034:98968..99411(-)	frameshift		99015	WP_011861986.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	91.2	78.4	89.6
MGA_2853	LOCUS_28240	sequence036:168..362(-)	partial			WP_003425974.1	hypothetical protein	100.0	68.8	92.2
MGA_2926	LOCUS_28900	sequence042:10..501(-)	partial			WP_009898049.1	GGDEF domain-containing protein	88.3	19.0	55.6
MGA_2948	LOCUS_29090	sequence051:3..1007(+)	partial			WP_011028773.1	FtsX-like permease family protein	52.7	20.8	26.1
MGA_2951	LOCUS_29110	sequence052:1697..>2368(-)	partial			WP_106777216.1	DHHW family protein	92.8	34.0	25.8
MGA_2958	LOCUS_29150	sequence055:52..864(+)	partial			WP_011861148.1	cell wall-binding protein Cwp26	100.0	56.8	98.5
MGA_2960	LOCUS_29170	sequence055:1174..1845(+)	frameshift		1821	WP_141741171.1	IS3 family transposase	71.3	34.9	26.6
MGA_2961	LOCUS_29180	sequence055:1839..2738(+)	frameshift		1806	WP_100190734.1	IS3 family transposase	98.0	56.3	42.9
MGA_2962	LOCUS_29190	sequence055:5610..5807(+)	frameshift,internal_stop_codon	5442..5444(+),5514..5516(+),5974..5976(+),5472..5474(+),5592..5594(+),6100..6102(+)	5786,5814	WP_011860988.1	ORF6N domain-containing protein	92.3	22.7	75.0
MGA_2972	LOCUS_29290	sequence055:11541..11723(+)	frameshift		11720	WP_011861154.1	BlaI/MecI/CopY family transcriptional regulator	98.3	45.7	91.5
MGA_2973	LOCUS_29300	sequence055:11806..11931(+)	frameshift		11720	WP_011861154.1	BlaI/MecI/CopY family transcriptional regulator	100.0	31.8	97.6
MGA_3021	LOCUS_29720	sequence063:14386..14712(+)	partial			WP_010714182.1	VRR-NUC domain-containing protein	70.4	70.8	40.8
MGA_3056	LOCUS_29980	sequence069:1..1119(+)	partial			WP_009889145.1	NlpC/P60 family protein	95.2	62.9	38.7
MGA_3060	LOCUS_30010	sequence070:490..2016(+)	partial			WP_021391917.1	glycine rich domain-containing protein	55.5	49.6	81.9
MGA_3069	LOCUS_30090	sequence071:294..2693(+)	partial			WP_011861227.1	cell wall-binding protein Cwp20	36.2	28.6	59.2
MGA_3077	LOCUS_30150	sequence073:2239..3243(+)	partial			WP_010247013.1	type IV secretory system conjugative DNA transfer family protein	98.5	55.4	96.4
MGA_3093	LOCUS_30310	sequence073:13709..15154(+)	partial			WP_097383638.1	Ti-type conjugative transfer relaxase TraA	52.8	23.8	39.1
MGA_3095	LOCUS_30330	sequence073:15549..15827(-)	partial			WP_005812625.1	type II toxin-antitoxin system RelB/DinJ family antitoxin	67.4	69.7	59.7
MGA_3096	LOCUS_30340	sequence073:16143..16352(+)	partial			WP_011861105.1	cysteine-rich VLP domain-containing protein	82.6	47.1	47.4
MGA_3097	LOCUS_30350	sequence073:16466..17200(+)	partial			WP_000774716.1	phage replisome organizer N-terminal domain-containing protein	51.2	43.7	60.8
MGA_3098	LOCUS_30360	sequence073:17197..18060(+)	partial			WP_012099498.1	ATP-binding protein	64.1	68.0	40.4
MGA_3101	LOCUS_30390	sequence073:18917..19462(+)	partial			WP_010247013.1	type IV secretory system conjugative DNA transfer family protein	92.3	28.1	98.2
MGA_3104	LOCUS_30420	sequence073:20309..21157(-)	partial			WP_010707088.1	helix-turn-helix transcriptional regulator	28.4	26.6	39.5
MGA_3108	LOCUS_30460	sequence073:23793..24479(+)	partial			WP_010883577.1	DNA primase	60.1	25.9	31.4
MGA_3109	LOCUS_30470	sequence073:24439..25797(+)	partial			WP_010714181.1	VapE family protein	74.6	40.8	33.1
MGA_3120	LOCUS_30560	sequence075:2535..2768(+)	partial			WP_011861099.1	helix-turn-helix transcriptional regulator	71.4	47.0	76.4
MGA_3123	LOCUS_30590	sequence075:4009..4230(+)	partial			WP_010247013.1	type IV secretory system conjugative DNA transfer family protein	100.0	12.3	97.3
MGA_3125	LOCUS_30610	sequence075:4709..4867(+)	partial			WP_011861358.1	Maff2 family protein	98.1	71.8	96.1
MGA_3130	LOCUS_30660	sequence075:7571..8377(-)	partial			WP_003428185.1	XRE family transcriptional regulator	26.1	65.1	48.6
MGA_3134	LOCUS_30700	sequence075:10307..11887(+)	partial			WP_035454417.1	MobQ family relaxase	47.0	35.7	34.7
MGA_3135	LOCUS_30710	sequence075:11953..12597(+)	partial			WP_113592804.1	DNA primase	39.3	15.2	39.3
MGA_3136	LOCUS_30720	sequence075:12509..13903(+)	partial			WP_001668899.1	virulence-associated E family protein	71.1	67.5	30.5
MGA_3170	LOCUS_31040	sequence077:264..632(-)	partial			WP_010890791.1	MerR family transcriptional regulator	92.6	74.3	41.6
MGA_3188	LOCUS_31130	sequence085:884..1861(+)	partial			WP_010963661.1	ADP-ribosyltransferase	75.1	57.0	27.8
MGA_3203	LOCUS_31230	sequence090:129..974(-)	partial			WP_011861808.1	PTS transporter subunit EIIC	99.6	68.3	88.6
MGA_3206	LOCUS_31250	sequence091:2648..2932(-)	frameshift		2982	WP_004454225.1	hypothetical protein	97.9	32.4	46.7
MGA_3207	LOCUS_31260	sequence091:2977..3504(-)	frameshift		2985	WP_004454225.1	hypothetical protein	98.9	60.6	50.3
MGA_3213	LOCUS_31320	sequence091:8903..9037(-)	partial			WP_011861846.1	hypothetical protein	97.7	31.4	72.1
MGA_3219	LOCUS_31380	sequence091:17864..18091(+)	partial			WP_117288021.1	IS3 family transposase	56.0	10.6	59.5
MGA_3220	LOCUS_31390	sequence091:18193..18582(+)	frameshift,internal_stop_codon	18089..18091(+)	18579	WP_100190734.1	IS3 family transposase	100.0	24.7	42.6
MGA_3225	LOCUS_31440	sequence091:22861..23196(-)	internal_stop_codon	23305..23307(-),22810..22812(-),23443..23445(-),22861..22863(-)		WP_026198991.1	IS1182 family transposase	100.0	20.6	45.9
MGA_3226	LOCUS_31450	sequence091:23443..23889(-)	frameshift,internal_stop_codon	23904..23906(-),23304..23306(-),24142..24144(-),23442..23444(-),24075..24077(-)	24059,24093	WP_026198991.1	IS1182 family transposase	100.0	31.6	42.6
MGA_3231	LOCUS_31500	sequence091:30594..31241(-)	partial			WP_011023573.1	type I-B CRISPR-associated protein Cas5b	65.1	67.1	33.3
MGA_3232	LOCUS_31510	sequence091:31721..32848(-)	partial			WP_048065733.1	HNH endonuclease	38.7	57.6	41.1
MGA_3255	LOCUS_31690	sequence094:5094..5369(+)	internal_stop_codon	5367..5369(+)		WP_011861864.1	VOC family protein	100.0	68.9	95.6
MGA_3280	LOCUS_31940	sequence094:36778..37149(-)	frameshift		37184	WP_009891610.1	aldo/keto reductase	100.0	33.0	100.0
MGA_3281	LOCUS_31950	sequence094:37173..37898(-)	frameshift		37184	WP_009891610.1	aldo/keto reductase	98.8	63.8	95.8
MGA_3285	LOCUS_31980	sequence095:1..868(+)	partial			WP_000522544.1	ABC transporter permease	96.9	42.1	40.0
MGA_3313	LOCUS_32220	sequence098:10356..10841(+)	partial			WP_011861015.1	hypothetical protein	52.8	54.8	56.5
MGA_3318	LOCUS_32270	sequence098:13221..13679(+)	partial			WP_015392767.1	phBC6A51 family helix-turn-helix protein	67.1	72.4	33.0
MGA_3336	LOCUS_32450	sequence098:24131..27523(+)	partial			WP_003438437.1	hypothetical protein	35.2	45.9	26.9
MGA_3347	LOCUS_32540	sequence099:636..1775(+)	partial			WP_048065247.1	Fic family protein	77.0	71.2	28.2
MGA_3354	LOCUS_32610	sequence099:7145..7312(+)	frameshift		7309	WP_003435466.1	N-acetylmuramoyl-L-alanine amidase	69.1	14.5	86.8
MGA_3376	LOCUS_32780	sequence103:900..1190(+)	frameshift		1169	WP_003061815.1	sigma-70 family RNA polymerase sigma factor	94.8	65.5	74.7
MGA_3429	LOCUS_33310	sequence103:55948..56304(-)	frameshift		56360	WP_003429271.1	PLP-dependent aminotransferase family protein	100.0	29.6	100.0
MGA_3430	LOCUS_33320	sequence103:56313..57143(-)	frameshift		56360	WP_003429271.1	PLP-dependent aminotransferase family protein	95.3	66.1	98.1
MGA_3509	LOCUS_34070	sequence107:50018..51394(+)	partial			WP_002287699.1	SIR2 family protein	71.2	71.8	31.1
MGA_3510	LOCUS_34080	sequence107:51370..52470(+)	partial			WP_011763181.1	phosphomethylpyrimidine synthase ThiC	82.0	70.5	30.4
MGA_3511	LOCUS_34090	sequence107:52636..52881(+)	frameshift		52827	WP_003421197.1	FAD-dependent thymidylate synthase	79.0	25.4	90.6
MGA_3512	LOCUS_34100	sequence107:52830..53036(+)	frameshift		52827	WP_003421197.1	FAD-dependent thymidylate synthase	100.0	27.0	98.5
MGA_3516	LOCUS_34140	sequence107:55253..55426(+)	frameshift		55146,55420	WP_009887863.1	elongation factor Tu	98.2	14.1	89.3
MGA_3517	LOCUS_34150	sequence107:55444..55938(+)	frameshift		55832,55420,55798	WP_009887863.1	elongation factor Tu	86.6	35.8	86.6
MGA_3518	LOCUS_34160	sequence107:55971..56108(+)	frameshift		55797,55831	WP_009887863.1	elongation factor Tu	100.0	11.3	100.0
MGA_3584	LOCUS_34820	sequence109:10868..10987(+)	frameshift		10856	WP_011860638.1	phosphoglucosamine mutase	100.0	8.7	94.9
MGA_3632	LOCUS_35300	sequence110:10170..10685(-)	frameshift		10199	WP_009888767.1	S1-like domain-containing RNA-binding protein	94.7	57.9	93.8
MGA_3635	LOCUS_35330	sequence110:13774..14892(-)	frameshift		14915	WP_003434469.1	sigma 54-interacting transcriptional regulator	100.0	55.5	98.1
MGA_3636	LOCUS_35340	sequence110:14862..15785(-)	frameshift		14915	WP_003434469.1	sigma 54-interacting transcriptional regulator	94.5	43.3	96.9
MGA_3650	LOCUS_35480	sequence110:31348..31851(+)	frameshift,internal_stop_codon	31244..31246(+)	31312,31348,31318	WP_003434500.1	M56 family metallopeptidase	98.2	43.2	54.3
MGA_3651	LOCUS_35490	sequence110:32181..32783(+)	frameshift		32780	WP_003434500.1	M56 family metallopeptidase	100.0	53.1	94.0
MGA_3652	LOCUS_35500	sequence110:32819..33319(+)	frameshift		32780	WP_003434500.1	M56 family metallopeptidase	98.2	43.2	80.0
MGA_3666	LOCUS_35640	sequence110:47526..48260(+)	frameshift		48242	WP_012583893.1	nickel pincer cofactor biosynthesis protein LarC	98.4	61.4	49.8
MGA_3667	LOCUS_35650	sequence110:48290..48661(+)	frameshift,internal_stop_codon	48258..48260(+)	48269	WP_004080598.1	nickel pincer cofactor biosynthesis protein LarC	97.6	29.9	35.0
MGA_3672	LOCUS_35700	sequence110:52531..52896(-)	partial			WP_003428185.1	XRE family transcriptional regulator	55.4	63.2	67.2
MGA_3685	LOCUS_35830	sequence110:58226..58399(+)	partial			WP_011861749.1	resolvase	71.9	71.9	97.6
MGA_3728	LOCUS_36260	sequence110:80842..81012(+)	partial			WP_003429855.1	hypothetical protein	53.6	56.6	100.0
MGA_3749	LOCUS_36440	sequence112:1739..2068(+)	frameshift		2017	WP_004310179.1	site-specific DNA-methyltransferase	78.0	33.2	44.7
MGA_3750	LOCUS_36450	sequence112:2242..2508(+)	frameshift		2017	WP_010989482.1	site-specific DNA-methyltransferase	78.4	33.0	56.5
MGA_3766	LOCUS_36600	sequence113:5877..6113(-)	partial			WP_011860667.1	alpha/beta hydrolase	100.0	28.2	98.7
MGA_3808	LOCUS_37020	sequence113:51524..52756(+)	partial			WP_000058907.1	alpha-hydroxy-acid oxidizing protein	88.0	47.0	26.7
MGA_3844	LOCUS_37370	sequence114:1..747(+)	partial			WP_003435962.1	iron-containing alcohol dehydrogenase	100.0	66.0	98.0
MGA_3851	LOCUS_37440	sequence114:6040..7050(+)	partial			WP_009966621.1	DNA relaxase NicK	78.9	72.4	29.5
MGA_3888	LOCUS_37810	sequence114:42271..42960(+)	frameshift		42957	WP_003435907.1	DUF5685 family protein	100.0	82.1	98.7
MGA_3893	LOCUS_37860	sequence114:46334..47167(-)	partial			WP_011860726.1	hypothetical protein	35.0	34.4	87.6
MGA_3913	LOCUS_38060	sequence115:17649..19082(+)	partial			WP_011860734.1	collagen-like exosporium glycoprotein BclA1	69.0	45.7	72.6
MGA_3915	LOCUS_38080	sequence115:21793..23172(+)	frameshift		23145	WP_003434815.1	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	96.9	50.6	99.8
MGA_3916	LOCUS_38090	sequence115:23190..24434(+)	frameshift		23145	WP_003434815.1	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	100.0	47.0	99.0
MGA_3920	LOCUS_38130	sequence115:28629..28952(+)	frameshift		28913	WP_011860738.1	GHKL domain-containing protein	85.0	29.3	95.6
MGA_3921	LOCUS_38140	sequence115:29015..29563(+)	frameshift		28913	WP_011860738.1	GHKL domain-containing protein	100.0	58.5	99.5
MGA_3930	LOCUS_38230	sequence115:40029..40523(+)	frameshift		40520	WP_009888206.1	hypothetical protein	100.0	52.4	90.2
MGA_3931	LOCUS_38240	sequence115:40526..40969(+)	frameshift		40514	WP_009888206.1	hypothetical protein	91.8	43.1	100.0
MGA_3958	LOCUS_38510	sequence115:69474..69689(-)	partial			WP_002288357.1	site-specific integrase	63.4	12.0	60.0
MGA_3961	LOCUS_38540	sequence115:71409..72296(+)	internal_stop_codon	72294..72296(+)		WP_011860809.1	cell wall-binding protein Cwp27	100.0	76.4	97.3
MGA_3984	LOCUS_38770	sequence115:98164..98685(+)	frameshift		98658	WP_011860815.1	HAD family hydrolase	96.5	79.9	98.2
MGA_3985	LOCUS_38780	sequence115:99026..99235(+)	partial			WP_115624820.1	hypothetical protein	88.4	65.2	70.5
MGA_4030	LOCUS_39230	sequence117:25274..26413(+)	partial			WP_048065247.1	Fic family protein	77.0	71.2	28.8
MGA_4088	LOCUS_39780	sequence121:2981..3139(+)	frameshift		3121	WP_011860858.1	BMP family ABC transporter substrate-binding protein	92.3	14.4	68.8
MGA_4089	LOCUS_39790	sequence121:3136..3984(+)	frameshift		3124	WP_011860858.1	BMP family ABC transporter substrate-binding protein	100.0	84.4	96.1
MGA_4103	LOCUS_39920	sequence123:9785..10048(-)	partial			WP_009888369.1	MFS transporter	100.0	20.9	100.0
MGA_4111	LOCUS_40000	sequence123:17758..17904(-)	partial			WP_196793289.1	PAS domain-containing hybrid sensor histidine kinase/response regulator	83.3	5.0	62.5
MGA_4113	LOCUS_40020	sequence123:19183..20094(-)	partial			WP_011860865.1	GGDEF domain-containing protein	96.4	74.5	94.2
MGA_4134	LOCUS_40210	sequence125:1105..1641(+)	partial			WP_015444804.1	GNAT family N-acetyltransferase	92.1	48.4	35.9
MGA_4135	LOCUS_40220	sequence125:1801..2466(+)	partial			WP_033562369.1	ClC family H(+)/Cl(-) exchange transporter	100.0	42.2	100.0
MGA_4138	LOCUS_40240	sequence127:1045..1944(+)	partial			WP_033562369.1	ClC family H(+)/Cl(-) exchange transporter	100.0	57.1	97.7
MGA_4158	LOCUS_40430	sequence131:146..352(+)	partial			WP_011860904.1	glycosylating toxin TcdA	72.1	1.8	95.9
