{ "type": "genome", "identifier": "GCF_030073505.1", "organism": "Gulosibacter molinativorax", "title": "Gulosibacter molinativorax", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Biocant", "publication": [ {} ], "properties": { "assembly_accession": "GCF_030073505.1", "bioproject": "PRJNA224116", "biosample": "SAMN08636150", "wgs_master": "PXVD00000000.1", "refseq_category": "na", "taxid": "256821", "species_taxid": "256821", "organism_name": "Gulosibacter molinativorax", "infraspecific_name": "strain=ON4(-)", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/05/24", "asm_name": "ASM3007350v1", "asm_submitter": "Biocant", "gbrs_paired_asm": "GCA_030073505.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/030/073/505/GCF_030073505.1_ASM3007350v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3405077", "genome_size_ungapped": "3405077", "gc_percent": "64.500000", "replicon_count": "0", "scaffold_count": "79", "contig_count": "79", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_030073505.1-RS_2024_05_25", "annotation_date": "2024-05-25", "total_gene_count": "3176", "protein_coding_gene_count": "3084", "non_coding_gene_count": "56", "pubmed_id": "36109598" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-05-24", "dateModified": "2023-05-24", "datePublished": "2023-05-24", "_annotation": { "sample_count": 1, "sample_organism": [ "Gulosibacter molinativorax" ], "sample_taxid": [ "256821" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "missing" ], "sample_host_location_id": [], "data_size": "0.951 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3405077", "Number of Sequences": "79", "Longest Sequences (bp)": "210102", "N50 (bp)": "118074", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "64.3", "Number of CDSs": "3152", "Average Protein Length": "323.2", "Coding Ratio (%)": "89.7", "Number of rRNAs": "3", "Number of tRNAs": "49", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Gulosibacter molinativorax", "strain": "strain=ON4", "accession": "GCA_003010915.2", "taxid": 256821, "species_taxid": 256821, "relation_to_type": "type", "validated": true, "ani": 99.9988, "matched_fragments": 1097, "total_fragments": 1098, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Gulosibacter molinativorax", "strain": "strain=DSM 13485", "accession": "GCA_000425685.1", "taxid": 256821, "species_taxid": 256821, "relation_to_type": "type", "validated": true, "ani": 99.9892, "matched_fragments": 1073, "total_fragments": 1098, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Gulosibacter chungangensis", "strain": "strain=KCTC 13959", "accession": "GCA_008831155.1", "taxid": 979746, "species_taxid": 979746, "relation_to_type": "type", "validated": true, "ani": 81.1585, "matched_fragments": 515, "total_fragments": 1098, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gulosibacter faecalis", "strain": "strain=B187", "accession": "GCA_000381765.1", "taxid": 272240, "species_taxid": 272240, "relation_to_type": "type", "validated": true, "ani": 79.6017, "matched_fragments": 390, "total_fragments": 1098, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gulosibacter macacae", "strain": "strain=YIM 102482-1", "accession": "GCA_003865375.1", "taxid": 2488791, "species_taxid": 2488791, "relation_to_type": "type", "validated": true, "ani": 78.848, "matched_fragments": 291, "total_fragments": 1098, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gulosibacter bifidus", "strain": "strain=NBRC 103089", "accession": "GCA_001570925.1", "taxid": 272239, "species_taxid": 272239, "relation_to_type": "type", "validated": true, "ani": 78.4973, "matched_fragments": 198, "total_fragments": 1098, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces mariniharenae", "strain": "strain=NEAU-184", "accession": "GCA_008122505.1", "taxid": 2604423, "species_taxid": 2604423, "relation_to_type": "type", "validated": true, "ani": 77.4878, "matched_fragments": 237, "total_fragments": 1098, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces marinus", "strain": "strain=DSM 26151", "accession": "GCA_021442325.1", "taxid": 1389020, "species_taxid": 1389020, "relation_to_type": "type", "validated": true, "ani": 77.3919, "matched_fragments": 191, "total_fragments": 1098, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces aurantiacus", "strain": "strain=DSM 14598", "accession": "GCA_016907355.1", "taxid": 165814, "species_taxid": 165814, "relation_to_type": "type", "validated": true, "ani": 77.3313, "matched_fragments": 237, "total_fragments": 1098, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces intestinalis", "strain": "strain=KACC 19306", "accession": "GCA_008365295.1", "taxid": 2592652, "species_taxid": 2592652, "relation_to_type": "type", "validated": true, "ani": 77.3284, "matched_fragments": 214, "total_fragments": 1098, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gryllotalpicola protaetiae", "strain": "strain=2DFW10M-5", "accession": "GCA_003627055.1", "taxid": 2419771, "species_taxid": 2419771, 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"ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900163695.1", "gtdb_species": "s__Gulosibacter sp900163695", "ani": 80.1862, "matched_fragments": 467, "total_fragments": 1098, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Gulosibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900626105.1", "gtdb_species": "s__Gulosibacter sp900626105", "ani": 79.6652, "matched_fragments": 383, "total_fragments": 1098, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Gulosibacter", "ani_circumscription_radius": 95.0, 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