{ "type": "genome", "identifier": "GCF_030135485.1", "organism": "Streptomyces fragilis", "title": "Streptomyces fragilis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Harvard University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_030135485.1", "bioproject": "PRJNA224116", "biosample": "SAMN35359939", "wgs_master": "JASKYV000000000.1", "refseq_category": "na", "taxid": "67301", "species_taxid": "67301", "organism_name": "Streptomyces fragilis", "infraspecific_name": "strain=ISP 5044", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/05/30", "asm_name": "ASM3013548v1", "asm_submitter": "Harvard University", "gbrs_paired_asm": "GCA_030135485.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/030/135/485/GCF_030135485.1_ASM3013548v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6881709", "genome_size_ungapped": "6844161", "gc_percent": "73.000000", "replicon_count": "0", "scaffold_count": "12", "contig_count": "12", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_030135485.1-RS_2024_08_29", "annotation_date": "2024-08-29", "total_gene_count": "6217", "protein_coding_gene_count": "5800", "non_coding_gene_count": "74", "pubmed_id": "37151182" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-05-30", "dateModified": "2023-05-30", "datePublished": "2023-05-30", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptomyces fragilis" ], "sample_taxid": [ "67301" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA: Parke, Davis & 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"accession": "GCA_014138735.1", "taxid": 67282, "species_taxid": 67282, "relation_to_type": "type", "validated": true, "ani": 82.4994, "matched_fragments": 1365, "total_fragments": 2289, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces galbus", "strain": "strain=JCM 4639", "accession": "GCA_014650535.1", "taxid": 33898, "species_taxid": 33898, "relation_to_type": "type", "validated": true, "ani": 82.492, "matched_fragments": 1333, "total_fragments": 2289, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces longwoodensis", "strain": "strain=DSM 41677", "accession": "GCA_001514125.1", "taxid": 68231, "species_taxid": 68231, "relation_to_type": "type", "validated": true, "ani": 82.4385, "matched_fragments": 1377, "total_fragments": 2289, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces viridosporus", "strain": "strain=NRRL 2414", "accession": "GCA_002078235.1", "taxid": 67581, 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