{ "type": "genome", "identifier": "GCF_030160775.1", "organism": "Chitiniphilus shinanonensis", "title": "Chitiniphilus shinanonensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)", "publication": [ {} ], "properties": { "assembly_accession": "GCF_030160775.1", "bioproject": "PRJNA224116", "biosample": "SAMD00576802", "wgs_master": "BSOZ00000000.1", "refseq_category": "na", "taxid": "553088", "species_taxid": "553088", "organism_name": "Chitiniphilus shinanonensis", "infraspecific_name": "strain=NBRC 104970", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/02/15", "asm_name": "ASM3016077v1", "asm_submitter": "WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)", "gbrs_paired_asm": "GCA_030160775.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/030/160/775/GCF_030160775.1_ASM3016077v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4139944", "genome_size_ungapped": "4139229", "gc_percent": "66.000000", "replicon_count": "0", "scaffold_count": "253", "contig_count": "253", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2023-09-04", "total_gene_count": "3927", "protein_coding_gene_count": "3801", "non_coding_gene_count": "60", "pubmed_id": "30832757" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-02-15", "dateModified": "2023-02-15", "datePublished": "2023-02-15", "_annotation": { "sample_count": 1, "sample_organism": [ "Chitiniphilus shinanonensis" ], "sample_taxid": [ "553088" ], 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Formivibrio citricus", "strain": "strain=DSM 6150", "accession": "GCA_900115065.1", "taxid": 83765, "species_taxid": 83765, "relation_to_type": "type", "validated": true, "ani": 78.3404, "matched_fragments": 300, "total_fragments": 1271, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium amazonense", "strain": "strain=DSM 26508", "accession": "GCA_001855565.1", "taxid": 1382803, "species_taxid": 1382803, "relation_to_type": "type", "validated": true, "ani": 78.2939, "matched_fragments": 378, "total_fragments": 1271, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ralstonia pseudosolanacearum", "strain": "strain=LMG 9673", "accession": "GCA_024925465.1", "taxid": 1310165, "species_taxid": 1310165, "relation_to_type": "type", "validated": true, "ani": 77.7788, "matched_fragments": 322, "total_fragments": 1271, "ani_threshold": 95, "status": 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