{
    "type": "genome",
    "identifier": "GCF_030161515.1",
    "organism": "Deinococcus metallilatus",
    "title": "Deinococcus metallilatus",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_030161515.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMD00582106",
        "wgs_master": "BSUI00000000.1",
        "refseq_category": "na",
        "taxid": "1211322",
        "species_taxid": "1211322",
        "organism_name": "Deinococcus metallilatus",
        "infraspecific_name": "strain=NBRC 110141",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/03/24",
        "asm_name": "ASM3016151v1",
        "asm_submitter": "WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)",
        "gbrs_paired_asm": "GCA_030161515.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/030/161/515/GCF_030161515.1_ASM3016151v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4391412",
        "genome_size_ungapped": "4391412",
        "gc_percent": "68.500000",
        "replicon_count": "0",
        "scaffold_count": "40",
        "contig_count": "40",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_030161515.1-RS_2024_06_02",
        "annotation_date": "2024-06-02",
        "total_gene_count": "4334",
        "protein_coding_gene_count": "4214",
        "non_coding_gene_count": "63",
        "pubmed_id": "30832757"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-03-24",
    "dateModified": "2023-03-24",
    "datePublished": "2023-03-24",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Deinococcus metallilatus"
        ],
        "sample_taxid": [
            "1211322"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "missing"
        ],
        "sample_host_location_id": [],
        "data_size": "1.201 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4391412",
        "Number of Sequences": "40",
        "Longest Sequences (bp)": "437566",
        "N50 (bp)": "316924",
        "Gap Ratio (%)": "0.000205",
        "GCcontent (%)": "68.7",
        "Number of CDSs": "4310",
        "Average Protein Length": "301.5",
        "Coding Ratio (%)": "88.8",
        "Number of rRNAs": "1",
        "Number of tRNAs": "50",
        "Number of CRISPRs": "6"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Deinococcus metallilatus",
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                "relation_to_type": "type",
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            {
                "organism_name": "Deinococcus metallilatus",
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                "validated": true,
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                "status": "conclusive"
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            {
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            },
            {
                "organism_name": "Deinococcus phoenicis",
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                "species_taxid": 1476583,
                "relation_to_type": "type",
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                "matched_fragments": 885,
                "total_fragments": 1447,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Deinococcus aerius",
                "strain": "strain=TR0125",
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                "species_taxid": 200253,
                "relation_to_type": "type",
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                "ani": 85.5343,
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                "total_fragments": 1447,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Deinococcus geothermalis",
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                "accession": "GCA_000196275.1",
                "taxid": 68909,
                "species_taxid": 68909,
                "relation_to_type": "type",
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                "ani": 83.742,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Deinococcus planocerae",
                "strain": "strain=XY-FW106",
                "accession": "GCA_002869765.1",
                "taxid": 1737569,
                "species_taxid": 1737569,
                "relation_to_type": "type",
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                "ani": 83.2414,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "strain": "strain=DSM 19763",
                "accession": "GCA_000381345.1",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Deinococcus budaensis",
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                "accession": "GCA_014201885.1",
                "taxid": 1665626,
                "species_taxid": 1665626,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.6515,
                "matched_fragments": 813,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
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                "accession": "GCF_004758605.1",
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            {
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "mean_intra_species_ani": "N/A",
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        ]
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    "_bac2feature": {
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    "_genome_taxon": [
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    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}