{ "type": "genome", "identifier": "GCF_030284385.1", "organism": "Altererythrobacter rubellus", "title": "Altererythrobacter rubellus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "South China Sea Institute of Oceanology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_030284385.1", "bioproject": "PRJNA224116", "biosample": "SAMN35640467", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "2173831", "species_taxid": "2173831", "organism_name": "Altererythrobacter rubellus", "infraspecific_name": "strain=NBRC 112769", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/06/17", "asm_name": "ASM3028438v1", "asm_submitter": "South China Sea Institute of Oceanology", "gbrs_paired_asm": "GCA_030284385.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/030/284/385/GCF_030284385.1_ASM3028438v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2296411", "genome_size_ungapped": "2296411", "gc_percent": "57.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_030284385.1-RS_2024_06_16", "annotation_date": "2024-06-16", "total_gene_count": "2300", "protein_coding_gene_count": "2225", "non_coding_gene_count": "48", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-06-17", "dateModified": "2023-06-17", "datePublished": "2023-06-17", "_annotation": { "sample_count": 1, "sample_organism": [ "Altererythrobacter rubellus" ], "sample_taxid": [ "2173831" ], "sample_host_organism": [], 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Qipengyuania vesicularis", "strain": "strain=1NDH10", "accession": "GCA_019711415.1", "taxid": 2867232, "species_taxid": 2867232, "relation_to_type": "type", "validated": true, "ani": 77.7441, "matched_fragments": 216, "total_fragments": 765, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Qipengyuania flava", "strain": "strain=DSM 16421", "accession": "GCA_011762005.1", "taxid": 192812, "species_taxid": 192812, "relation_to_type": "type", "validated": true, "ani": 77.7434, "matched_fragments": 213, "total_fragments": 765, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Qipengyuania soli", "strain": "strain=6D36", "accession": "GCA_015529805.1", "taxid": 2782568, "species_taxid": 2782568, "relation_to_type": "type", "validated": true, "ani": 77.7185, "matched_fragments": 193, "total_fragments": 765, "ani_threshold": 95, "status": "below_threshold" }, { 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"strain=JBTF-M21", "accession": "GCA_007004095.1", "taxid": 2584124, "species_taxid": 2584124, "relation_to_type": "type", "validated": true, "ani": 77.5585, "matched_fragments": 212, "total_fragments": 765, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pelagerythrobacter rhizovicinus", "strain": "strain=AY-3R", "accession": "GCA_004135625.1", "taxid": 2268576, "species_taxid": 2268576, "relation_to_type": "type", "validated": true, "ani": 77.5043, "matched_fragments": 158, "total_fragments": 765, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pelagerythrobacter aerophilus", "strain": "strain=Ery1", "accession": "GCA_003581645.1", "taxid": 2306995, "species_taxid": 2306995, "relation_to_type": "type", "validated": true, "ani": 77.4985, "matched_fragments": 196, "total_fragments": 765, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Erythrobacter colymbi", "strain": "strain=JCM 18338", "accession": 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