{ "type": "genome", "identifier": "GCF_030295765.1", "organism": "Neptuniibacter halophilus", "title": "Neptuniibacter halophilus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Laboratory of Microbiology, Division of Marine Life Science, Faculty of Fisheries Sciences, Hokkaido University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_030295765.1", "bioproject": "PRJNA224116", "biosample": "SAMD00578001", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "651666", "species_taxid": "651666", "organism_name": "Neptuniibacter halophilus", "infraspecific_name": "strain=LMG 25378", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/03/11", "asm_name": "ASM3029576v1", "asm_submitter": "Laboratory of Microbiology, Division of Marine Life Science, Faculty of Fisheries Sciences, Hokkaido University", "gbrs_paired_asm": "GCA_030295765.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/030/295/765/GCF_030295765.1_ASM3029576v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4113600", "genome_size_ungapped": "4113600", "gc_percent": "53.500000", "replicon_count": "2", "scaffold_count": "2", "contig_count": "2", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_030295765.1-RS_2024_06_21", "annotation_date": "2024-06-21", "total_gene_count": "3850", "protein_coding_gene_count": "3728", "non_coding_gene_count": "103", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-03-11", "dateModified": "2023-03-11", "datePublished": "2023-03-11", "_annotation": { "sample_count": 1, "sample_organism": [ "Neptuniibacter halophilus" ], 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"below_threshold" }, { "organism_name": "Marinobacterium litorale", "strain": "strain=DSM 23545", "accession": "GCA_000428985.1", "taxid": 404770, "species_taxid": 404770, "relation_to_type": "type", "validated": true, "ani": 77.2047, "matched_fragments": 159, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinobacterium rhizophilum", "strain": "strain=DSM 18822", "accession": "GCA_000378045.1", "taxid": 420402, "species_taxid": 420402, "relation_to_type": "type", "validated": true, "ani": 76.9209, "matched_fragments": 136, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinobacter oulmenensis", "strain": "strain=DSM 22359", "accession": "GCA_014201735.1", "taxid": 643747, "species_taxid": 643747, "relation_to_type": "type", "validated": true, "ani": 76.2604, "matched_fragments": 62, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinobacter daepoensis", "strain": "strain=DSM 16072", "accession": "GCA_000421165.1", "taxid": 262077, "species_taxid": 262077, "relation_to_type": "type", "validated": true, "ani": 76.1109, "matched_fragments": 55, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000153345.1", "gtdb_species": "s__Neptuniibacter caesariensis", "ani": 79.5046, "matched_fragments": 383, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__Neptuniibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001597735.1", "gtdb_species": "s__Neptuniibacter pectenicola", "ani": 78.8299, 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