# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_12	LOCUS_00120	sequence1:14675..15097(+)	partial			WP_004535320.1	GspH/FimT family pseudopilin	100.0	70.4	100.0
MGA_24	LOCUS_00240	sequence1:26228..26626(+)	partial			WP_004524546.1	CidA/LrgA family protein	86.4	73.1	86.8
MGA_106	LOCUS_01060	sequence1:114171..114425(-)	partial			WP_011204746.1	SIR2 family protein	100.0	25.1	98.8
MGA_217	LOCUS_02170	sequence1:218972..219124(-)	frameshift		219159	WP_004198972.1	hypothetical protein	100.0	51.5	98.0
MGA_236	LOCUS_02360	sequence1:239292..240146(-)	partial			WP_004523251.1	cache domain-containing protein	71.8	44.4	30.0
MGA_308	LOCUS_03080	sequence1:313061..313327(+)	frameshift		312897	WP_004197846.1	hypothetical protein	100.0	52.4	94.3
MGA_353	LOCUS_03530	sequence1:362526..362711(+)	partial			WP_223232933.1	hypothetical protein	100.0	27.7	100.0
MGA_419	LOCUS_04190	sequence1:437525..437656(-)	frameshift		437661	WP_009902587.1	zinc-dependent alcohol dehydrogenase family protein	100.0	13.1	86.0
MGA_434	LOCUS_04340	sequence1:456427..457017(+)	partial			WP_004198027.1	hypothetical protein	100.0	72.9	90.3
MGA_508	LOCUS_05080	sequence1:538151..538552(-)	partial			WP_004195342.1	hypothetical protein	30.1	67.8	92.5
MGA_574	LOCUS_05740	sequence1:612202..613113(-)	internal_stop_codon	613162..613164(-)		WP_011204825.1	hypothetical protein	99.7	84.8	96.7
MGA_578	LOCUS_05780	sequence1:616835..617908(-)	partial			WP_011204828.1	tyrosine-type recombinase/integrase	99.2	71.0	62.7
MGA_579	LOCUS_05790	sequence1:618313..619137(-)	partial			WP_028231588.1	site-specific integrase	95.3	66.0	30.1
MGA_581	LOCUS_05810	sequence1:620801..622330(-)	partial			WP_011119689.1	serine/threonine-protein kinase	41.7	39.5	30.7
MGA_641	LOCUS_06410	sequence1:703903..704244(+)	partial			WP_004550867.1	zinc ribbon domain-containing protein	52.2	52.2	98.3
MGA_704	LOCUS_07040	sequence1:776543..776932(-)	internal_stop_codon	776543..776545(-)		WP_011204857.1	DUF4377 domain-containing protein	98.4	84.1	82.7
MGA_712	LOCUS_07120	sequence1:788242..788838(-)	partial			WP_011104856.1	C4-dicarboxylate transporter DctA	66.7	30.8	36.6
MGA_719	LOCUS_07190	sequence1:796177..796572(+)	frameshift		796151	WP_003410178.1	erythromycin esterase family protein	100.0	19.4	46.3
MGA_725	LOCUS_07250	sequence1:804567..804725(-)	frameshift		804868	WP_004543692.1	hypothetical protein	92.3	22.9	95.8
MGA_726	LOCUS_07260	sequence1:805204..808155(-)	partial			WP_011204863.1	cytochrome c oxidase subunit I	69.9	73.0	97.1
MGA_740	LOCUS_07400	sequence1:826596..827030(+)	frameshift		826739,826781,826805	WP_066494930.1	tetratricopeptide repeat protein	100.0	76.8	52.3
MGA_743	LOCUS_07430	sequence1:829436..830671(+)	partial			WP_002263541.1	ATP-grasp domain-containing protein	56.0	59.2	26.4
MGA_745	LOCUS_07450	sequence1:831821..833116(+)	partial			WP_011027502.1	ATP-grasp domain-containing protein	61.7	64.6	26.9
MGA_751	LOCUS_07510	sequence1:838401..838652(-)	partial			WP_013095608.1	response regulator transcription factor	63.9	25.7	54.7
MGA_768	LOCUS_07680	sequence1:859968..861311(+)	partial			WP_011388286.1	DnaJ domain-containing protein	55.3	61.5	41.2
MGA_770	LOCUS_07700	sequence1:862240..863073(-)	frameshift		863099	WP_038802333.1	IS3-like element IS407 family transposase	100.0	74.3	99.3
MGA_771	LOCUS_07710	sequence1:863097..863360(-)	frameshift		863099	WP_038802333.1	IS3-like element IS407 family transposase	100.0	23.3	97.7
MGA_772	LOCUS_07720	sequence1:863462..864157(+)	partial			WP_004535567.1	hypothetical protein	50.2	47.5	31.9
MGA_776	LOCUS_07760	sequence1:866553..867245(-)	partial			WP_011083692.1	site-specific integrase	100.0	70.2	48.9
MGA_977	LOCUS_09770	sequence1:1090100..1090642(+)	internal_stop_codon	1090640..1090642(+)		WP_004555960.1	hypothetical protein	100.0	76.3	97.8
MGA_978	LOCUS_09780	sequence1:1090661..1090810(+)	internal_stop_codon	1090640..1090642(+)		WP_004555960.1	hypothetical protein	100.0	20.8	98.0
MGA_1004	LOCUS_10040	sequence1:1123858..1124790(-)	partial			WP_004199405.1	GIY-YIG nuclease family protein	59.7	62.1	80.5
MGA_1005	LOCUS_10050	sequence1:1124973..1125638(+)	partial			WP_085486134.1	glycoside hydrolase family 3 C-terminal domain-containing protein	40.3	11.5	64.0
MGA_1032	LOCUS_10320	sequence1:1153794..1154450(-)	frameshift		1153860	WP_004193210.1	serine hydrolase	100.0	57.7	100.0
MGA_1036	LOCUS_10360	sequence1:1157323..1157676(-)	frameshift		1157441,1157474,1157699	WP_166204126.1	IS3-like element ISRj2 family transposase	56.4	17.6	62.1
MGA_1086	LOCUS_10860	sequence1:1212710..1214305(-)	frameshift,internal_stop_codon	1214057..1214059(-),1214262..1214264(-),1212917..1212919(-),1214118..1214120(-),1214027..1214029(-),1212941..1212943(-)	1214272,1212961,1214245,1214150,1214217,1214167,1214187,1212820,1213975	WP_011204947.1	DNA translocase FtsK	96.4	27.8	100.0
MGA_1214	LOCUS_12140	sequence1:1360277..1360741(+)	frameshift		1360164	WP_004538461.1	transposase	100.0	73.0	96.8
MGA_1233	LOCUS_12330	sequence1:1390354..1390752(+)	partial			WP_004536449.1	hypothetical protein	84.1	73.5	50.5
MGA_1246	LOCUS_12460	sequence1:1410092..1411936(+)	frameshift		1411336	WP_011204978.1	AAA family ATPase	59.4	40.6	90.1
MGA_1247	LOCUS_12470	sequence1:1412026..1412763(+)	partial			WP_011204978.1	AAA family ATPase	100.0	27.3	90.6
MGA_1257	LOCUS_12570	sequence1:1422168..1422890(+)	partial			WP_004536033.1	cytochrome b/b6 domain-containing protein	94.2	59.8	88.5
MGA_1272	LOCUS_12720	sequence1:1436830..1437201(-)	partial			WP_004535941.1	porin	98.4	63.0	94.2
MGA_1273	LOCUS_12730	sequence1:1437466..1437855(-)	partial			WP_004534644.1	hypothetical protein	86.0	73.5	100.0
MGA_1287	LOCUS_12870	sequence1:1453692..1455098(-)	frameshift		1454721,1455203,1455221,1455013,1454793,1455276,1455037	WP_011854050.1	DUF2242 domain-containing protein	45.5	45.5	94.8
MGA_1307	LOCUS_13070	sequence1:1474542..1475312(+)	partial			WP_162496168.1	triphosphoribosyl-dephospho-CoA synthase MdcB	100.0	59.1	83.6
MGA_1361	LOCUS_13610	sequence1:1530952..1531338(-)	partial			WP_001350488.1	site-specific integrase	67.2	23.3	48.9
MGA_1366	LOCUS_13660	sequence1:1533742..1534164(-)	partial			WP_004552312.1	PAAR domain-containing protein	62.9	48.6	48.9
MGA_1367	LOCUS_13670	sequence1:1534502..1534858(-)	partial			WP_128933672.1	IS3 family transposase	51.7	15.4	47.5
MGA_1415	LOCUS_14150	sequence1:1605905..1606528(+)	partial			WP_004526761.1	hypothetical protein	92.8	62.7	97.4
MGA_1443	LOCUS_14430	sequence1:1640742..1640951(+)	partial			WP_004542464.1	osmosis-related lipoprotein	68.1	69.1	83.0
MGA_1483	LOCUS_14830	sequence1:1692203..1693915(-)	frameshift		1693611,1693909	WP_024900385.1	efflux transporter outer membrane subunit	81.1	78.6	92.0
MGA_1526	LOCUS_15260	sequence1:1741426..1741704(-)	partial			WP_004521679.1	hypothetical protein	69.6	69.6	71.9
MGA_1554	LOCUS_15540	sequence1:1777823..1778164(+)	partial			WP_004191084.1	prepilin peptidase	100.0	68.1	77.9
MGA_1710	LOCUS_17100	sequence1:1974746..1974940(-)	frameshift		1974915	WP_011205058.1	MarR family winged helix-turn-helix transcriptional regulator	82.8	29.6	100.0
MGA_1711	LOCUS_17110	sequence1:1974850..1975284(-)	frameshift		1974915	WP_004191579.1	MarR family winged helix-turn-helix transcriptional regulator	85.4	68.7	93.5
MGA_1754	LOCUS_17540	sequence1:2044177..2044581(-)	partial			WP_004200731.1	DUF2778 domain-containing protein	76.9	64.4	59.2
MGA_1762	LOCUS_17620	sequence1:2049583..2050203(+)	partial			WP_066842340.1	IS256 family transposase	44.2	22.6	50.0
MGA_1764	LOCUS_17640	sequence1:2050570..2050893(+)	partial			WP_004537687.1	metalloregulator ArsR/SmtB family transcription factor	100.0	47.8	89.7
MGA_1768	LOCUS_17680	sequence1:2054779..2055483(+)	frameshift		2055309	WP_004521482.1	DUF917 domain-containing protein	98.7	63.6	77.9
MGA_1769	LOCUS_17690	sequence1:2055390..2055878(+)	frameshift		2055300	WP_004521482.1	DUF917 domain-containing protein	100.0	44.6	99.4
MGA_1773	LOCUS_17730	sequence1:2060662..2061099(+)	partial			WP_211951264.1	IS5 family transposase	66.2	45.5	80.2
MGA_1775	LOCUS_17750	sequence1:2062514..2062756(+)	partial			WP_004521477.1	porin	100.0	21.9	97.5
MGA_1776	LOCUS_17760	sequence1:2063496..2063687(-)	partial			WP_000165178.1	IS3 family transposase	87.3	50.9	52.7
MGA_1779	LOCUS_17790	sequence1:2066506..2066808(+)	frameshift		2066342,2066713,2066650,2066523,2066381,2066287	WP_085954781.1	IS5 family transposase	94.0	34.6	60.2
MGA_1799	LOCUS_17990	sequence1:2100582..2100752(-)	frameshift		2100778	WP_038747407.1	EAL domain-containing protein	100.0	21.2	85.7
MGA_1800	LOCUS_18000	sequence1:2100749..2101321(-)	frameshift		2100778	WP_038747407.1	EAL domain-containing protein	96.8	69.7	87.5
MGA_1804	LOCUS_18040	sequence1:2107724..2107987(-)	frameshift		2108025,2108092	WP_011205034.1	YadA-like family protein	100.0	7.7	100.0
MGA_1845	LOCUS_18450	sequence1:2154013..2154174(+)	partial			WP_004550904.1	cytochrome bd-I oxidase subunit CydX	49.1	81.2	96.2
MGA_1851	LOCUS_18510	sequence1:2158890..2159243(-)	frameshift,internal_stop_codon	2158889..2158891(-)	2159269	WP_003113040.1	non-ribosomal peptide synthetase	98.3	11.6	54.8
MGA_1852	LOCUS_18520	sequence1:2159240..2159563(-)	frameshift		2159269	WP_003113040.1	non-ribosomal peptide synthetase	91.6	10.2	70.3
MGA_1853	LOCUS_18530	sequence1:2159560..2160318(-)	partial			WP_003113143.1	non-ribosomal peptide synthetase	75.8	8.4	43.3
MGA_1874	LOCUS_18740	sequence1:2184492..2184833(-)	partial			WP_017843822.1	hypothetical protein	100.0	41.9	92.9
MGA_1886	LOCUS_18860	sequence1:2196207..2197343(+)	frameshift		2197307	WP_004544505.1	Nramp family divalent metal transporter	92.1	80.0	96.0
MGA_1887	LOCUS_18870	sequence1:2197337..2197513(+)	frameshift		2197307	WP_004544505.1	Nramp family divalent metal transporter	100.0	13.3	89.7
MGA_1959	LOCUS_19590	sequence1:2276734..2277342(+)	partial			WP_004192357.1	helix-hairpin-helix domain-containing protein	35.6	35.6	97.2
MGA_2040	LOCUS_20400	sequence1:2363513..2363731(-)	partial			WP_004196619.1	hypothetical protein	59.7	66.2	97.7
MGA_2060	LOCUS_20600	sequence1:2385029..2385454(+)	partial			WP_004552312.1	PAAR domain-containing protein	62.4	48.6	50.0
MGA_2065	LOCUS_20650	sequence1:2387818..2388081(-)	frameshift		2387844	WP_011071010.1	DNA adenine methylase	72.4	24.9	55.6
MGA_2127	LOCUS_21270	sequence1:2458741..2459478(-)	partial			WP_004535989.1	phytochelatin synthase family protein	100.0	70.0	91.4
MGA_2260	LOCUS_22600	sequence1:2624199..2624546(+)	partial			WP_004533974.1	lipoprotein	67.8	67.8	93.6
MGA_2272	LOCUS_22720	sequence1:2639144..2639482(+)	frameshift		2639479	WP_004199566.1	peptide chain release factor 2	24.1	7.4	100.0
MGA_2273	LOCUS_22730	sequence1:2639757..2640503(+)	frameshift		2639479	WP_004199566.1	peptide chain release factor 2	100.0	67.6	100.0
MGA_2330	LOCUS_23300	sequence1:2713425..2714537(-)	partial			WP_072375051.1	AAA family ATPase	66.8	29.4	37.8
MGA_2331	LOCUS_23310	sequence1:2714524..2715309(-)	partial			WP_013368630.1	toprim domain-containing protein	63.2	48.7	32.8
MGA_2379	LOCUS_23780	sequence1:2769368..2769667(-)	partial			WP_004193840.1	DUF2249 domain-containing protein	87.9	65.9	98.9
MGA_2388	LOCUS_23870	sequence1:2778034..2778477(+)	partial			WP_011203845.1	glutathione binding-like protein	100.0	66.8	100.0
MGA_2483	LOCUS_24820	sequence1:2884173..2884541(+)	partial			WP_162499447.1	hypothetical protein	100.0	69.5	57.7
MGA_2518	LOCUS_25170	sequence1:2918044..2918361(-)	partial			WP_004189725.1	helix-hairpin-helix domain-containing protein	59.0	59.0	96.8
MGA_2524	LOCUS_25230	sequence1:2923700..2923927(-)	partial			WP_004189865.1	integration host factor subunit beta	100.0	70.1	100.0
MGA_2560	LOCUS_25590	sequence1:2972474..2972737(+)	partial			WP_004544209.1	hypothetical protein	100.0	55.1	96.6
MGA_2635	LOCUS_26340	sequence1:3050597..3051439(-)	frameshift		3050451	WP_009938464.1	Sir2 family protein	100.0	67.3	96.4
MGA_2668	LOCUS_26670	sequence1:3085515..3086189(-)	partial			WP_004550079.1	SDR family oxidoreductase	100.0	69.8	96.0
MGA_2760	LOCUS_27590	sequence1:3186671..3187696(+)	partial			WP_004186617.1	cell envelope integrity protein TolA	39.3	39.3	86.6
MGA_2791	LOCUS_27900	sequence1:3224849..3225715(-)	partial			WP_004522170.1	capsular biosynthesis protein	100.0	72.0	100.0
MGA_2808	LOCUS_28070	sequence1:3242393..3243235(+)	partial			WP_009938575.1	glycosyltransferase family 1 protein	99.6	72.8	100.0
MGA_2868	LOCUS_28670	sequence1:3313224..3315284(-)	frameshift,internal_stop_codon	3313483..3313485(-),3313318..3313320(-)	3315233,3313281	WP_014917883.1	ATP-dependent DNA helicase RecG	100.0	75.9	94.3
MGA_2918	LOCUS_29170	sequence1:3366837..3367535(-)	partial			WP_004535264.1	DUF3025 domain-containing protein	100.0	62.5	93.1
MGA_2995	LOCUS_29940	sequence1:3447999..3448256(-)	partial			WP_004195104.1	histone H1-like DNA-binding protein	35.3	20.1	100.0
MGA_3075	LOCUS_30740	sequence1:3542130..3542432(+)	partial			WP_004186876.1	DUF3761 domain-containing protein	71.0	68.9	97.2
MGA_3105	LOCUS_31040	sequence1:3579287..3579814(+)	partial			WP_025369750.1	M15 family metallopeptidase	100.0	61.8	94.9
MGA_3121	LOCUS_31200	sequence1:3600101..3600574(-)	partial			WP_004552628.1	N-6 DNA methylase	61.1	11.1	81.2
MGA_3122	LOCUS_31210	sequence1:3600571..3600930(-)	partial			WP_001218900.1	tyrosine-type recombinase/integrase	84.9	25.4	46.5
MGA_3126	LOCUS_31250	sequence1:3603504..3603767(+)	frameshift		3603764	WP_038802333.1	IS3-like element IS407 family transposase	100.0	23.3	97.7
MGA_3127	LOCUS_31260	sequence1:3603764..3604624(+)	frameshift		3603764	WP_038802333.1	IS3-like element IS407 family transposase	100.0	76.7	99.7
MGA_3282	LOCUS_32810	sequence1:3766014..3766664(-)	partial			WP_011205288.1	pyridoxamine 5'-phosphate oxidase family protein	92.1	74.3	99.5
MGA_3331	LOCUS_33300	sequence1:3819547..3819759(-)	partial			WP_011205294.1	outer membrane protein	100.0	53.0	100.0
MGA_3344	LOCUS_33430	sequence1:3832474..3832650(-)	partial			WP_004266306.1	hypothetical protein	100.0	55.2	100.0
MGA_3347	LOCUS_33460	sequence1:3834345..3834917(-)	partial			WP_011205520.1	VRR-NUC domain-containing protein	86.8	71.0	46.6
MGA_3350	LOCUS_33490	sequence1:3836768..3837100(-)	partial			WP_000147081.1	helix-turn-helix transcriptional regulator	71.8	77.5	57.0
MGA_3381	LOCUS_33790	sequence1:3875375..3875686(-)	frameshift		3875652	WP_064244205.1	FAD-binding oxidoreductase	81.6	18.2	53.5
MGA_3386	LOCUS_33840	sequence1:3879251..3879811(-)	partial			WP_004195845.1	TetR/AcrR family transcriptional regulator	88.7	72.4	97.6
MGA_3405	LOCUS_34030	sequence1:3904257..3904565(-)	partial			WP_004524510.1	ATP synthase subunit I	100.0	58.0	98.0
MGA_3487	LOCUS_34850	sequence2:50687..53593(-)	partial			WP_011962208.1	N-6 DNA methylase	34.0	34.1	27.6
MGA_3507	LOCUS_35050	sequence2:79101..79502(-)	frameshift		79558	WP_004536780.1	hypothetical protein	100.0	71.9	78.9
MGA_3511	LOCUS_35090	sequence2:85726..86277(+)	frameshift		86211	WP_011205327.1	hypothetical protein	88.5	66.4	97.5
MGA_3514	LOCUS_35120	sequence2:88286..88639(-)	frameshift,internal_stop_codon	88739..88741(-)	88318	WP_001299612.1	IS3 family transposase	90.6	35.5	61.3
MGA_3517	LOCUS_35150	sequence2:92170..92691(+)	partial			WP_045554706.1	ABC transporter permease	100.0	57.9	76.3
MGA_3523	LOCUS_35210	sequence2:101473..102483(+)	partial			WP_004543620.1	DUF2875 family protein	100.0	60.9	92.9
MGA_3532	LOCUS_35300	sequence2:113532..114359(+)	frameshift,internal_stop_codon	114357..114359(+)	113681,114050,113757	WP_011205333.1	YadA-like family protein	100.0	42.6	86.9
MGA_3551	LOCUS_35490	sequence2:138513..138704(+)	partial			WP_005168539.1	PAAR domain-containing protein	98.4	70.9	48.4
MGA_3553	LOCUS_35510	sequence2:142062..143045(-)	partial			WP_011205341.1	UDP-N-acetylglucosamine-transferase	100.0	72.3	99.1
MGA_3568	LOCUS_35660	sequence2:163019..163540(-)	partial			WP_011205347.1	fimbria/pilus chaperone family protein	100.0	73.3	98.8
MGA_3615	LOCUS_36130	sequence2:226172..227110(-)	partial			WP_004196246.1	LysR family transcriptional regulator	100.0	69.6	99.4
MGA_3625	LOCUS_36230	sequence2:242119..242739(+)	frameshift		242002	WP_004188539.1	TagK domain-containing protein	100.0	83.1	86.9
MGA_3675	LOCUS_36730	sequence2:303731..304624(+)	frameshift		304123	WP_004187550.1	hypothetical protein	100.0	60.6	69.5
MGA_3681	LOCUS_36790	sequence2:311358..312185(+)	partial			WP_004266392.1	lysozyme inhibitor LprI family protein	100.0	71.4	95.3
MGA_3689	LOCUS_36870	sequence2:323434..323634(-)	frameshift		323656,323740	WP_003811189.1	LysR family transcriptional regulator	78.8	17.3	63.5
MGA_3727	LOCUS_37250	sequence2:363746..364471(+)	frameshift		363606	WP_038744105.1	acyltransferase family protein	100.0	34.2	99.2
MGA_3747	LOCUS_37450	sequence2:389117..389407(+)	frameshift,internal_stop_codon	389555..389557(+)	389401	WP_004200849.1	porin	84.4	22.7	75.9
MGA_3748	LOCUS_37460	sequence2:389404..389556(+)	frameshift,internal_stop_codon	389555..389557(+)	389401	WP_004200849.1	porin	96.0	13.2	83.3
MGA_3850	LOCUS_38470	sequence2:529396..529629(+)	partial			WP_001279278.1	helix-turn-helix transcriptional regulator	74.0	47.9	42.1
MGA_3861	LOCUS_38580	sequence2:542082..542969(-)	partial			WP_011269082.1	beta family protein	46.8	39.8	32.0
MGA_3862	LOCUS_38590	sequence2:543064..543216(-)	partial			WP_151062544.1	IS3 family transposase	78.0	10.4	100.0
MGA_3907	LOCUS_39040	sequence2:609293..609787(+)	frameshift		609275	WP_004188318.1	putative multidrug efflux transcriptional regulator CeoR	94.5	46.4	40.0
MGA_3917	LOCUS_39140	sequence2:620263..620559(+)	partial			WP_004525482.1	hypothetical protein	72.4	72.4	76.1
MGA_3951	LOCUS_39480	sequence2:666141..666377(+)	partial			WP_128933672.1	IS3 family transposase	66.7	13.2	55.8
MGA_3995	LOCUS_39920	sequence2:727955..728248(+)	partial			WP_004190471.1	hypothetical protein	100.0	68.8	87.6
MGA_4098	LOCUS_40950	sequence2:860255..862468(-)	frameshift,internal_stop_codon	860586..860588(-)	860321	WP_053799641.1	patatin-like phospholipase family protein	100.0	77.0	88.2
MGA_4106	LOCUS_41030	sequence2:868864..869658(-)	frameshift		868971	WP_011030119.1	terpene synthase family protein	80.3	58.7	37.3
MGA_4185	LOCUS_41810	sequence2:959294..959983(+)	frameshift		959217	WP_011205453.1	L-histidine N(alpha)-methyltransferase	100.0	70.7	95.6
MGA_4200	LOCUS_41960	sequence2:975914..976399(-)	frameshift		976428	WP_003083034.1	sensor histidine kinase	87.0	28.9	53.6
MGA_4201	LOCUS_41970	sequence2:976396..976557(-)	frameshift		976428	WP_003083034.1	sensor histidine kinase	73.6	8.1	69.2
MGA_4215	LOCUS_42110	sequence2:997664..998014(-)	frameshift		997888	WP_175897093.1	IS5 family transposase	70.7	45.2	43.4
MGA_4224	LOCUS_42200	sequence2:1006814..1006987(-)	internal_stop_codon	1007009..1007011(-)		WP_004551511.1	lipoprotein	100.0	10.4	100.0
MGA_4244	LOCUS_42400	sequence2:1028158..1028400(-)	partial			WP_004537669.1	alkaline phosphatase family protein	82.5	11.9	100.0
MGA_4247	LOCUS_42430	sequence2:1031813..1031971(+)	partial			WP_004528042.1	hypothetical protein	100.0	71.2	100.0
MGA_4249	LOCUS_42450	sequence2:1033338..1033727(-)	frameshift		1033740,1033367	WP_011036922.1	LysR family transcriptional regulator	91.5	36.5	38.1
MGA_4250	LOCUS_42460	sequence2:1034262..1034639(+)	frameshift		1034245	WP_013528175.1	L-arabinose ABC transporter permease AraH	92.0	38.3	55.4
MGA_4252	LOCUS_42480	sequence2:1036582..1036857(+)	partial			WP_004557493.1	cupin domain-containing protein	100.0	65.9	100.0
MGA_4276	LOCUS_42720	sequence2:1063398..1065257(+)	frameshift		1063616,1063685,1063177,1063644,1063613	WP_004536696.1	ESPR-type extended signal peptide-containing protein	100.0	37.1	70.0
MGA_4347	LOCUS_43430	sequence2:1147699..1148151(+)	frameshift		1148046	WP_004543544.1	L-2-amino-thiazoline-4-carboxylic acid hydrolase	58.7	20.6	100.0
MGA_4348	LOCUS_43440	sequence2:1148148..1148984(+)	frameshift		1148046	WP_004543544.1	L-2-amino-thiazoline-4-carboxylic acid hydrolase	100.0	65.1	95.3
MGA_4349	LOCUS_43450	sequence2:1148971..1149216(+)	frameshift		1149180	WP_004547538.1	allantoate amidohydrolase	75.3	13.3	62.3
MGA_4350	LOCUS_43460	sequence2:1149210..1149719(+)	frameshift		1149180	WP_003084676.1	Zn-dependent hydrolase	57.4	22.7	57.7
MGA_4354	LOCUS_43500	sequence2:1153403..1153669(+)	partial			WP_011267711.1	LysR family transcriptional regulator	60.2	17.4	47.2
MGA_4375	LOCUS_43710	sequence2:1182241..1182714(-)	partial			WP_000786773.1	transcriptional regulator	35.7	41.8	51.8
MGA_4381	LOCUS_43770	sequence2:1188244..1190271(-)	partial			WP_161138665.1	hypothetical protein	64.3	74.2	26.6
MGA_4382	LOCUS_43780	sequence2:1190511..1190792(+)	partial			WP_086026417.1	IS3-like element ISVpa2 family transposase	74.2	18.0	66.7
MGA_4388	LOCUS_43840	sequence2:1196272..1196637(-)	frameshift		1196737	WP_004531723.1	hypothetical protein	100.0	44.3	95.9
MGA_4463	LOCUS_44590	sequence2:1278819..1279088(-)	partial			WP_011204533.1	hypothetical protein	100.0	72.4	98.9
MGA_4515	LOCUS_45110	sequence2:1361856..1379297(+)	frameshift,internal_stop_codon	1379134..1379136(+)	1379305,1370867,1379413,1379367	WP_041280254.1	SDR family NAD(P)-dependent oxidoreductase	48.5	46.9	86.1
MGA_4530	LOCUS_45260	sequence2:1415121..1415264(+)	partial			WP_004199295.1	lipoprotein	68.1	61.5	87.5
MGA_4557	LOCUS_45530	sequence2:1445438..1445683(-)	partial			WP_004197873.1	TolC family protein	80.2	14.1	49.2
MGA_4655	LOCUS_46510	sequence2:1574533..1574940(+)	partial			WP_014919993.1	DUF4902 domain-containing protein	94.1	48.8	100.0
MGA_4661	LOCUS_46570	sequence2:1579058..1579885(+)	partial			WP_013097831.1	shikimate transporter	70.5	44.9	48.5
MGA_4664	LOCUS_46600	sequence2:1582261..1584078(-)	frameshift,internal_stop_codon	1582261..1582263(-)	1582212	WP_012701136.1	non-ribosomal peptide synthetase	93.9	12.6	44.8
MGA_4683	LOCUS_46790	sequence2:1617298..1617513(-)	partial			WP_059232860.1	IS256 family transposase	95.8	16.2	97.1
MGA_4684	LOCUS_46800	sequence2:1617414..1617962(-)	frameshift		1618121,1617989	WP_136623864.1	IS3 family transposase	68.7	33.1	60.8
MGA_4732	LOCUS_47280	sequence2:1686126..1686422(-)	frameshift		1686161	WP_004543264.1	hypothetical protein	82.7	65.8	85.2
MGA_4749	LOCUS_47450	sequence2:1708386..1720109(-)	partial			WP_004536879.1	hybrid non-ribosomal peptide synthetase/type I polyketide synthase	68.0	62.3	93.3
MGA_4776	LOCUS_47720	sequence2:1750528..1751046(+)	partial			WP_004536703.1	hypothetical protein	100.0	65.9	89.0
MGA_4814	LOCUS_48100	sequence2:1803463..1804725(-)	frameshift,internal_stop_codon	1804207..1804209(-),1803601..1803603(-),1804885..1804887(-),1804396..1804398(-),1804888..1804890(-),1804348..1804350(-),1804540..1804542(-),1804327..1804329(-),1804089..1804091(-)	1804704,1804836,1804933,1804677,1804519,1803273,1804173,1804561,1804918,1803735,1804796,1804221,1803486,1804127	WP_011831989.1	MFS transporter	96.2	53.8	89.1
MGA_4831	LOCUS_48270	sequence2:1820673..1820957(-)	partial			WP_004184504.1	helix-turn-helix transcriptional regulator	71.3	71.3	100.0
MGA_4869	LOCUS_48650	sequence2:1870403..1870819(-)	frameshift		1870829	WP_004524310.1	cytochrome d ubiquinol oxidase subunit II	100.0	41.1	92.0
MGA_4878	LOCUS_48740	sequence2:1879564..1880397(-)	partial			WP_009940693.1	hypothetical protein	100.0	54.4	92.1
MGA_4880	LOCUS_48760	sequence2:1882192..1882866(-)	partial			WP_009934508.1	type III secretion system effector ChbP	100.0	68.3	100.0
MGA_4886	LOCUS_48820	sequence2:1893463..1894305(-)	frameshift		1894448	WP_004551821.1	type III secretion system outer membrane ring subunit SctC	100.0	47.6	98.2
MGA_4887	LOCUS_48830	sequence2:1894302..1895228(-)	frameshift		1894448	WP_004551821.1	type III secretion system outer membrane ring subunit SctC	90.3	47.3	94.2
MGA_4936	LOCUS_49320	sequence2:1943858..1945483(+)	frameshift		1944353,1944421,1945094,1944263,1944139,1944461,1944494,1944368,1944467,1944214,1945143,1944284,1944223	WP_011205613.1	ESPR-type extended signal peptide-containing protein	100.0	20.5	71.7
MGA_4941	LOCUS_49370	sequence2:1952303..1952992(+)	frameshift		1952648,1952545,1952654,1952521	WP_011205615.1	ESPR-type extended signal peptide-containing protein	98.3	14.7	91.6
MGA_4952	LOCUS_49480	sequence2:1964632..1965342(+)	internal_stop_codon	1965340..1965342(+)		WP_004266410.1	cbb3-type cytochrome c oxidase subunit I	100.0	30.6	95.8
MGA_4953	LOCUS_49490	sequence2:1965394..1966950(+)	internal_stop_codon	1965340..1965342(+)		WP_004266410.1	cbb3-type cytochrome c oxidase subunit I	100.0	67.1	95.9
MGA_4984	LOCUS_49800	sequence2:2006706..2006948(-)	partial			WP_059232860.1	IS256 family transposase	60.0	10.3	85.4
MGA_4988	LOCUS_49840	sequence2:2010027..2010719(-)	frameshift		2010733	WP_004545727.1	TetR/AcrR family transcriptional regulator	100.0	67.7	58.8
MGA_5018	LOCUS_50140	sequence2:2047602..2051552(+)	partial			WP_174904940.1	type VI secretion system membrane subunit TssM-5	51.6	50.7	85.7
MGA_5019	LOCUS_50150	sequence2:2052646..2053488(+)	partial			WP_195760789.1	type VI secretion system protein TssM	100.0	43.3	70.2
MGA_5021	LOCUS_50170	sequence2:2054696..2055019(+)	partial			WP_011084661.1	IS481 family transposase	72.0	22.9	66.2
MGA_5033	LOCUS_50290	sequence2:2066633..2066914(-)	partial			WP_004525324.1	T3SS-associated acyl carrier protein BapB	72.0	72.0	92.5
MGA_5090	LOCUS_50860	sequence2:2132537..2136244(-)	frameshift,internal_stop_codon	2133716..2133718(-),2132875..2132877(-),2134654..2134656(-),2134909..2134911(-),2134969..2134971(-),2134213..2134215(-),2132879..2132881(-),2134381..2134383(-),2132390..2132392(-)	2132613,2134664,2133640,2132873,2135418,2134544,2133779,2133530,2133281,2132776,2133289,2136314,2134584,2132794,2134205,2135617,2134979,2136133,2136271,2134482,2133334,2135128,2134107,2134622,2135521,2134626,2132964,2135653,2134000,2135798,2135800,2132986,2136060,2135294	WP_004203171.1	cellulose biosynthesis protein BcsC	100.0	78.0	78.3
MGA_5105	LOCUS_51010	sequence2:2151934..2152581(+)	partial			WP_009940852.1	hypothetical protein	100.0	73.1	94.9
MGA_5149	LOCUS_51450	sequence2:2203035..2212481(-)	frameshift		2203298,2203334,2203352,2203292,2203325	WP_011205654.1	non-ribosomal peptide synthetase	96.9	50.3	94.4
MGA_5162	LOCUS_51580	sequence2:2249598..2250290(-)	internal_stop_codon	2250396..2250398(-)		WP_004187683.1	histidine kinase	100.0	59.1	96.5
MGA_5163	LOCUS_51590	sequence2:2250396..2250767(-)	internal_stop_codon	2250396..2250398(-)		WP_004544542.1	histidine kinase	100.0	31.6	100.0
MGA_5170	LOCUS_51660	sequence2:2259205..2259621(-)	frameshift		2259225	WP_004188382.1	transporter	95.7	69.8	90.9
MGA_5177	LOCUS_51730	sequence2:2267982..2268131(+)	partial			WP_004551968.1	hypothetical protein	100.0	51.6	100.0
MGA_5199	LOCUS_51940	sequence2:2296275..2296718(-)	partial			WP_004540541.1	HU family DNA-binding protein	63.3	63.3	86.0
MGA_5299	LOCUS_52940	sequence2:2422391..2422669(-)	frameshift		2422396,2422447	WP_011204760.1	phage virion morphogenesis protein	79.3	41.9	61.6
MGA_5443	LOCUS_54380	sequence2:2575568..2576176(+)	frameshift		2575440	WP_004190560.1	FUSC family protein	94.6	54.6	78.5
MGA_5491	LOCUS_54850	sequence2:2632401..2633342(-)	frameshift,internal_stop_codon	2633357..2633359(-),2633198..2633200(-),2633474..2633476(-)	2633465,2633290,2633263	WP_162496171.1	1-phosphofructokinase family hexose kinase	100.0	65.6	92.0
MGA_5492	LOCUS_54860	sequence2:2633474..2633830(-)	frameshift,internal_stop_codon	2633357..2633359(-),2633474..2633476(-)	2633568,2633290,2633263	WP_162496171.1	1-phosphofructokinase family hexose kinase	85.6	21.2	60.4
MGA_5512	LOCUS_55060	sequence2:2655805..2656869(+)	internal_stop_codon	2656867..2656869(+)		WP_011205714.1	collagen-like triple helix repeat-containing protein	100.0	59.3	71.2
MGA_5544	LOCUS_55380	sequence2:2696202..2696924(-)	frameshift		2696177,2696234	WP_005167919.1	amino acid ABC transporter substrate-binding protein	88.8	70.1	43.2
MGA_5546	LOCUS_55400	sequence2:2698547..2698858(-)	frameshift		2698570	WP_151062544.1	IS3 family transposase	79.6	21.8	76.8
MGA_5550	LOCUS_55440	sequence2:2704211..2705323(+)	partial			WP_003895767.1	aromatic ring-hydroxylating dioxygenase subunit alpha	44.1	42.9	37.1
MGA_5551	LOCUS_55450	sequence2:2705577..2706419(-)	partial			WP_004552141.1	hypothetical protein	100.0	72.2	97.1
MGA_5552	LOCUS_55460	sequence2:2707108..2707734(+)	partial			WP_059232860.1	IS256 family transposase	59.6	29.6	58.1
MGA_5557	LOCUS_55510	sequence2:2714272..2715096(-)	partial			WP_004552147.1	YaiO family outer membrane beta-barrel protein	100.0	65.6	96.7
MGA_5568	LOCUS_55620	sequence2:2727925..2728188(+)	partial			WP_004524895.1	hypothetical protein	70.1	70.1	88.5
MGA_5594	LOCUS_55880	sequence2:2759362..2759493(+)	partial			WP_003816713.1	DUF1153 domain-containing protein	100.0	41.3	88.4
MGA_5595	LOCUS_55890	sequence2:2759538..2760398(-)	frameshift		2760397	WP_038802333.1	IS3-like element IS407 family transposase	100.0	76.7	99.7
MGA_5596	LOCUS_55900	sequence2:2760395..2760658(-)	frameshift		2760397	WP_038802333.1	IS3-like element IS407 family transposase	100.0	23.3	97.7
MGA_5597	LOCUS_55910	sequence2:2760689..2761282(-)	partial			WP_004199610.1	DUF746 domain-containing protein	94.4	49.9	92.7
MGA_5608	LOCUS_56020	sequence2:2783705..2784193(-)	partial			WP_000088522.1	IS66-like element IS682 family transposase	68.5	22.0	35.0
MGA_5610	LOCUS_56040	sequence2:2784567..2784830(-)	partial			WP_004555373.1	transposase	100.0	64.4	87.4
MGA_5619	LOCUS_56130	sequence2:2798133..2798390(+)	partial			WP_001138014.1	Tn3-like element TnAs1 family transposase	56.5	4.9	60.4
MGA_5622	LOCUS_56160	sequence2:2801858..2802472(-)	frameshift		2802483	WP_004552171.1	hypothetical protein	91.2	44.3	67.9
MGA_5646	LOCUS_56400	sequence2:2834189..2834803(+)	frameshift		2834737	WP_004552203.1	LysR substrate-binding domain-containing protein	84.3	56.6	99.4
MGA_5664	LOCUS_56580	sequence2:2857965..2858300(-)	partial			WP_011205734.1	hypothetical protein	100.0	60.0	97.3
MGA_5768	LOCUS_57620	sequence2:2972795..2972974(+)	partial			WP_167361398.1	hypothetical protein	69.5	80.4	63.4
MGA_5796	LOCUS_57900	sequence2:3002570..3002881(-)	frameshift		3002913	WP_004541998.1	HAD-IIIA family hydrolase	100.0	50.7	95.3
MGA_5797	LOCUS_57910	sequence2:3002782..3003192(-)	frameshift		3002913	WP_004541998.1	HAD-IIIA family hydrolase	69.1	44.5	92.6
MGA_5810	LOCUS_58040	sequence2:3018396..3018656(-)	partial			WP_004196882.1	hypothetical protein	100.0	50.9	93.0
