{ "tc_result": [ { "organism_name": "Pseudochrobactrum asaccharolyticum", "strain": "strain=DSM 25619", "accession": "GCA_003314995.1", "taxid": 354351, "species_taxid": 354351, "relation_to_type": "type", "validated": true, "ani": 90.1933, "matched_fragments": 1179, "total_fragments": 1468, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudochrobactrum algeriensis", "strain": "", "accession": "GCA_018436245.1", "taxid": 2834768, "species_taxid": 2834768, "relation_to_type": "type", "validated": true, "ani": 86.2374, "matched_fragments": 1047, "total_fragments": 1468, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudochrobactrum algeriensis", "strain": "", "accession": "GCA_907164595.1", "taxid": 2834768, "species_taxid": 2834768, "relation_to_type": "type", "validated": true, "ani": 86.2265, "matched_fragments": 1048, "total_fragments": 1468, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudochrobactrum 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5082", "accession": "GCA_002008225.1", "taxid": 1183413, "species_taxid": 1183413, "relation_to_type": "type", "validated": true, "ani": 76.4047, "matched_fragments": 110, "total_fragments": 1468, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agrobacterium leguminum", "strain": "strain=MOPV5", "accession": "GCA_015704895.1", "taxid": 2792015, "species_taxid": 2792015, "relation_to_type": "type", "validated": true, "ani": 76.3117, "matched_fragments": 105, "total_fragments": 1468, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_003314995.1", "gtdb_species": "s__Pseudochrobactrum asaccharolyticum", "ani": 90.1933, "matched_fragments": 1179, "total_fragments": 1468, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales_A;f__Rhizobiaceae_A;g__Pseudochrobactrum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.18", "min_intra_species_ani": "95.14", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.85", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_900470285.1", "gtdb_species": "s__Pseudochrobactrum sp900470285", "ani": 86.3737, "matched_fragments": 1021, "total_fragments": 1468, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales_A;f__Rhizobiaceae_A;g__Pseudochrobactrum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.83", "min_intra_species_ani": "97.83", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_008801715.1", "gtdb_species": "s__Pseudochrobactrum saccharolyticum", "ani": 86.1876, "matched_fragments": 1001, "total_fragments": 1468, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales_A;f__Rhizobiaceae_A;g__Pseudochrobactrum", "ani_circumscription_radius": 95.0, 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"min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004343585.1", "gtdb_species": "s__Neorhizobium sp004343585", "ani": 76.6032, "matched_fragments": 106, "total_fragments": 1468, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Neorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002980495.1", "gtdb_species": "s__Paramesorhizobium phragmitis", "ani": 76.3551, "matched_fragments": 172, "total_fragments": 1468, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales_A;f__Rhizobiaceae_A;g__Paramesorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }