{ "tc_result": [ { "organism_name": "Corynebacterium massiliense", "strain": "strain=DSM 45435", "accession": "GCA_000420605.1", "taxid": 441501, "species_taxid": 441501, "relation_to_type": "type", "validated": true, "ani": 80.1776, "matched_fragments": 393, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium phoceense", "strain": "strain=MC1", "accession": "GCA_900092335.1", "taxid": 1686286, "species_taxid": 1686286, "relation_to_type": "type", "validated": true, "ani": 80.0705, "matched_fragments": 390, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium halotolerans", "strain": "strain=YIM 70093 = DSM 44683", "accession": "GCA_000341345.1", "taxid": 225326, "species_taxid": 225326, "relation_to_type": "type", "validated": true, "ani": 79.9779, "matched_fragments": 424, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium singulare", "strain": "strain=IBS B52218", "accession": "GCA_000833575.1", "taxid": 161899, "species_taxid": 161899, "relation_to_type": "type", "validated": true, "ani": 79.9162, "matched_fragments": 333, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium tuberculostearicum", "strain": "strain=FDAARGOS_1117", "accession": "GCA_016728365.1", "taxid": 38304, "species_taxid": 38304, "relation_to_type": "type", "validated": true, "ani": 79.7962, "matched_fragments": 359, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium tuberculostearicum", "strain": "strain=DSM 44922", "accession": "GCA_013408445.1", "taxid": 38304, "species_taxid": 38304, "relation_to_type": "type", "validated": true, "ani": 79.7354, "matched_fragments": 359, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium minutissimum", "strain": "strain=FDAARGOS_894", "accession": "GCA_016027615.1", "taxid": 38301, "species_taxid": 38301, "relation_to_type": "type", "validated": true, "ani": 79.6957, "matched_fragments": 326, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium minutissimum", "strain": "strain=NCTC10288", "accession": "GCA_900478045.1", "taxid": 38301, "species_taxid": 38301, "relation_to_type": "type", "validated": true, "ani": 79.6861, "matched_fragments": 323, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium halotolerans", "strain": "strain=DSM 44683", "accession": "GCA_000688435.1", "taxid": 225326, "species_taxid": 225326, "relation_to_type": "type", "validated": true, "ani": 79.628, "matched_fragments": 419, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium camporealensis", "strain": "strain=CIP 105508", "accession": "GCA_000766885.2", "taxid": 161896, "species_taxid": 161896, "relation_to_type": "type", "validated": true, "ani": 79.622, "matched_fragments": 374, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium striatum", "strain": "strain=FDAARGOS_1054", "accession": "GCA_016403285.1", "taxid": 43770, "species_taxid": 43770, "relation_to_type": "type", "validated": true, "ani": 79.6203, "matched_fragments": 350, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium striatum", "strain": "strain=NBRC 15291", "accession": "GCA_006538485.1", "taxid": 43770, "species_taxid": 43770, "relation_to_type": "type", "validated": true, "ani": 79.5756, "matched_fragments": 347, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium camporealensis", "strain": "strain=DSM 44610", "accession": "GCA_000980815.1", "taxid": 161896, "species_taxid": 161896, "relation_to_type": "type", "validated": true, "ani": 79.5505, "matched_fragments": 374, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium minutissimum", "strain": "strain=NBRC 15361", "accession": "GCA_001552395.1", "taxid": 38301, "species_taxid": 38301, "relation_to_type": "type", "validated": true, "ani": 79.5323, "matched_fragments": 318, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium haemomassiliense", "strain": "strain=Marseille-Q3615", "accession": "GCA_013978595.1", "taxid": 2754726, "species_taxid": 2754726, "relation_to_type": "type", "validated": true, "ani": 79.5182, "matched_fragments": 344, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium minutissimum", "strain": "strain=ATCC 23348", "accession": "GCA_000805675.1", "taxid": 38301, "species_taxid": 38301, "relation_to_type": "type", "validated": true, "ani": 79.3918, "matched_fragments": 319, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium yudongzhengii", "strain": "strain=2183", "accession": "GCA_003065405.1", "taxid": 2080740, "species_taxid": 2080740, "relation_to_type": "type", "validated": true, "ani": 79.2488, "matched_fragments": 326, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium senegalense", "strain": "strain=Marseille-P4329", "accession": "GCA_900411315.1", "taxid": 2080750, "species_taxid": 2080750, "relation_to_type": "type", "validated": true, "ani": 79.2475, "matched_fragments": 353, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium lujinxingii", "strain": "strain=zg-917", "accession": "GCA_014490555.1", "taxid": 2763010, "species_taxid": 2763010, "relation_to_type": "type", "validated": true, "ani": 79.2306, "matched_fragments": 274, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium timonense", "strain": "strain=DSM 45434", "accession": "GCA_900105305.1", "taxid": 441500, "species_taxid": 441500, "relation_to_type": "type", "validated": true, "ani": 78.7788, "matched_fragments": 289, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium timonense", "strain": "strain=5401744", "accession": "GCA_000312345.1", "taxid": 441500, "species_taxid": 441500, "relation_to_type": "type", "validated": true, "ani": 78.6241, "matched_fragments": 277, "total_fragments": 827, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 99.54, "contamination": 2.6, "strain_heterogeneity": 20.0 }, "gtdb_result": [ { "accession": "GCF_001815935.1", "gtdb_species": "s__Corynebacterium sp001815935", "ani": 94.7471, "matched_fragments": 728, "total_fragments": 827, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001586215.1", "gtdb_species": "s__Corynebacterium simulans", "ani": 80.7004, "matched_fragments": 359, "total_fragments": 827, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.78", "min_intra_species_ani": "97.47", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.92", "num_clustered_genomes": 11, "status": "-" }, { "accession": "GCF_000420605.1", "gtdb_species": "s__Corynebacterium massiliense", "ani": 80.1626, "matched_fragments": 394, "total_fragments": 827, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900092335.1", "gtdb_species": "s__Corynebacterium phoceense", "ani": 80.0774, "matched_fragments": 390, "total_fragments": 827, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.96", "min_intra_species_ani": "96.08", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.92", "num_clustered_genomes": 11, "status": "-" }, { "accession": "GCF_002861385.1", "gtdb_species": "s__Corynebacterium aurimucosum_C", "ani": 79.9136, "matched_fragments": 364, "total_fragments": 827, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.04", "min_intra_species_ani": "96.50", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.89", "num_clustered_genomes": 28, "status": "-" }, { "accession": "GCF_000341345.1", "gtdb_species": "s__Corynebacterium halotolerans", "ani": 79.9057, "matched_fragments": 423, "total_fragments": 827, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_016127015.1", "gtdb_species": "s__Corynebacterium aurimucosum_E", "ani": 79.7321, "matched_fragments": 339, "total_fragments": 827, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.91", "min_intra_species_ani": "96.45", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.89", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_013408445.1", "gtdb_species": "s__Corynebacterium tuberculostearicum", "ani": 79.661, "matched_fragments": 357, "total_fragments": 827, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 96.3332, "mean_intra_species_ani": "98.29", "min_intra_species_ani": "96.59", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.92", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_016889765.1", "gtdb_species": "s__Corynebacterium minutissimum_B", "ani": 79.6212, "matched_fragments": 316, "total_fragments": 827, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.10", "min_intra_species_ani": "96.19", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.91", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_900539985.1", "gtdb_species": "s__Corynebacterium sp900539985", "ani": 79.5842, "matched_fragments": 294, "total_fragments": 827, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001812805.1", "gtdb_species": "s__Corynebacterium sp001812805", "ani": 79.5523, "matched_fragments": 327, "total_fragments": 827, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000980815.1", "gtdb_species": "s__Corynebacterium camporealensis", "ani": 79.5357, "matched_fragments": 375, "total_fragments": 827, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.96", "min_intra_species_ani": "99.96", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_013978595.1", "gtdb_species": "s__Corynebacterium haemomassiliense", "ani": 79.5165, "matched_fragments": 344, "total_fragments": 827, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000175635.1", "gtdb_species": "s__Corynebacterium tuberculostearicum_C", "ani": 79.4623, "matched_fragments": 347, "total_fragments": 827, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 96.3332, "mean_intra_species_ani": "96.71", "min_intra_species_ani": "96.71", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003065405.1", "gtdb_species": "s__Corynebacterium yudongzhengii", "ani": 79.3473, "matched_fragments": 327, "total_fragments": 827, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900411315.1", "gtdb_species": "s__Corynebacterium senegalense", "ani": 79.2593, "matched_fragments": 350, "total_fragments": 827, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_012838985.1", "gtdb_species": "s__Corynebacterium sp012838985", "ani": 79.0786, "matched_fragments": 291, "total_fragments": 827, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003955685.1", "gtdb_species": "s__Corynebacterium sp003955685", "ani": 79.0547, "matched_fragments": 328, "total_fragments": 827, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }