{ "tc_result": [ { "organism_name": "Corynebacterium gallinarum", "strain": "strain=Sa1YVA5", "accession": "GCA_014837045.1", "taxid": 2762214, "species_taxid": 2762214, "relation_to_type": "type", "validated": true, "ani": 83.5778, "matched_fragments": 748, "total_fragments": 1046, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium efficiens", "strain": "strain=YS-314", "accession": "GCA_000011305.1", "taxid": 152794, "species_taxid": 152794, "relation_to_type": "type", "validated": true, "ani": 83.1847, "matched_fragments": 755, "total_fragments": 1046, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium efficiens", "strain": "strain=YS-314", "accession": "GCA_000160795.1", "taxid": 152794, "species_taxid": 152794, "relation_to_type": "type", "validated": true, "ani": 83.0498, "matched_fragments": 743, "total_fragments": 1046, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium crudilactis", "strain": "strain=JZ16", "accession": "GCA_001643015.1", "taxid": 1652495, "species_taxid": 1652495, "relation_to_type": "type", "validated": true, "ani": 79.6409, "matched_fragments": 306, "total_fragments": 1046, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium glutamicum", "strain": "strain=ATCC 13032", "accession": "GCA_002847405.1", "taxid": 1718, "species_taxid": 1718, "relation_to_type": "type", "validated": true, "ani": 79.5864, "matched_fragments": 352, "total_fragments": 1046, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium glutamicum", "strain": "strain=ATCC 13032", "accession": "GCA_000011325.1", "taxid": 1718, "species_taxid": 1718, "relation_to_type": "type", "validated": true, "ani": 79.5193, "matched_fragments": 364, "total_fragments": 1046, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium occultum", "strain": "strain=2039", "accession": "GCA_009734425.1", "taxid": 2675219, "species_taxid": 2675219, "relation_to_type": "type", "validated": true, "ani": 79.3749, "matched_fragments": 354, "total_fragments": 1046, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium suranareeae", "strain": "strain=N24", "accession": "GCA_002355155.1", "taxid": 2506452, "species_taxid": 2506452, "relation_to_type": "type", "validated": true, "ani": 79.3584, "matched_fragments": 294, "total_fragments": 1046, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium glutamicum", "strain": "strain=ATCC 13032", "accession": "GCA_011761195.1", "taxid": 1718, "species_taxid": 1718, "relation_to_type": "type", "validated": true, "ani": 79.3428, "matched_fragments": 369, "total_fragments": 1046, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium marinum", "strain": "strain=CGMCC 1.6998", "accession": "GCA_014645275.1", "taxid": 349751, "species_taxid": 349751, "relation_to_type": "type", "validated": true, "ani": 79.1013, "matched_fragments": 306, "total_fragments": 1046, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium pollutisoli", "strain": "strain=VDS11", "accession": "GCA_900177745.1", "taxid": 1610489, "species_taxid": 1610489, "relation_to_type": "type", "validated": true, "ani": 78.6586, "matched_fragments": 301, "total_fragments": 1046, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium fournieri", "strain": "strain=Marseille-P2948", "accession": "GCA_900176865.1", "taxid": 1852390, "species_taxid": 1852390, "relation_to_type": "type", "validated": true, "ani": 77.5594, "matched_fragments": 160, "total_fragments": 1046, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 99.54, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014837045.1", "gtdb_species": "s__Corynebacterium sp014837045", "ani": 83.572, "matched_fragments": 747, "total_fragments": 1046, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000011305.1", "gtdb_species": "s__Corynebacterium efficiens", "ani": 83.1657, "matched_fragments": 754, "total_fragments": 1046, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.90", "min_intra_species_ani": "99.90", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000344785.1", "gtdb_species": "s__Corynebacterium callunae", "ani": 79.8798, "matched_fragments": 296, "total_fragments": 1046, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001277995.1", "gtdb_species": "s__Corynebacterium deserti", "ani": 79.7435, "matched_fragments": 331, "total_fragments": 1046, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001643015.1", "gtdb_species": "s__Corynebacterium crudilactis", "ani": 79.5957, "matched_fragments": 305, "total_fragments": 1046, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000011325.1", "gtdb_species": "s__Corynebacterium glutamicum", "ani": 79.5101, "matched_fragments": 363, "total_fragments": 1046, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.67", "min_intra_species_ani": "97.34", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.85", "num_clustered_genomes": 76, "status": "-" }, { "accession": "GCF_002355155.1", "gtdb_species": "s__Corynebacterium suranareeae", "ani": 79.3584, "matched_fragments": 294, "total_fragments": 1046, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000835165.1", "gtdb_species": "s__Corynebacterium marinum", "ani": 79.1514, "matched_fragments": 316, "total_fragments": 1046, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.21", "min_intra_species_ani": "98.42", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.94", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_900169525.1", "gtdb_species": "s__Corynebacterium pacaense", "ani": 79.0572, "matched_fragments": 388, "total_fragments": 1046, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003955685.1", "gtdb_species": "s__Corynebacterium sp003955685", "ani": 78.8154, "matched_fragments": 347, "total_fragments": 1046, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900177745.1", "gtdb_species": "s__Corynebacterium pollutisoli", "ani": 78.6446, "matched_fragments": 302, "total_fragments": 1046, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.83", "min_intra_species_ani": "98.83", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_012838985.1", "gtdb_species": "s__Corynebacterium sp012838985", "ani": 78.1004, "matched_fragments": 238, "total_fragments": 1046, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900176865.1", "gtdb_species": "s__Corynebacterium fournieri", "ani": 77.5622, "matched_fragments": 160, "total_fragments": 1046, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003693265.1", "gtdb_species": "s__Corynebacterium gottingense", "ani": 77.5392, "matched_fragments": 143, "total_fragments": 1046, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.52", "min_intra_species_ani": "97.05", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.90", "num_clustered_genomes": 11, "status": "-" } ] }