{ "type": "genome", "identifier": "GCF_030409775.1", "organism": "Pontixanthobacter aestiaquae", "title": "Pontixanthobacter aestiaquae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "The Institute of Microbiology of the Chinese Academy of Sciences", "publication": [ {} ], "properties": { "assembly_accession": "GCF_030409775.1", "bioproject": "PRJNA224116", "biosample": "SAMN35653691", "wgs_master": "JAUFQM000000000.1", "refseq_category": "na", "taxid": "1509367", "species_taxid": "1509367", "organism_name": "Pontixanthobacter aestiaquae", "infraspecific_name": "strain=CECT 8527", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/07/05", "asm_name": "ASM3040977v1", "asm_submitter": "The Institute of Microbiology of the Chinese Academy of Sciences", "gbrs_paired_asm": "GCA_030409775.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/030/409/775/GCF_030409775.1_ASM3040977v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2870496", "genome_size_ungapped": "2870496", "gc_percent": "57.000000", "replicon_count": "0", "scaffold_count": "4", "contig_count": "4", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_030409775.1-RS_2024_07_07", "annotation_date": "2024-07-07", "total_gene_count": "2765", "protein_coding_gene_count": "2709", "non_coding_gene_count": "48", "pubmed_id": "30832757" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-07-05", "dateModified": "2023-07-05", "datePublished": "2023-07-05", "_annotation": { "sample_count": 1, "sample_organism": [ "Pontixanthobacter aestiaquae" ], "sample_taxid": [ "1509367" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea" ], "sample_host_location_id": [], "data_size": "0.813 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "2870496", "Number of Sequences": "4", "Longest Sequences (bp)": "2857737", "N50 (bp)": "2857737", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "57.2", "Number of CDSs": "2724", "Average Protein Length": "321.9", "Coding Ratio (%)": "91.6", "Number of rRNAs": "3", "Number of tRNAs": "43", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Pontixanthobacter aestiaquae", "strain": "strain=KCTC 42006", "accession": "GCA_009827455.1", "taxid": 1509367, "species_taxid": 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