{ "type": "genome", "identifier": "GCF_030440575.1", "organism": "Corynebacterium ciconiae DSM 44920", "title": "Corynebacterium ciconiae DSM 44920", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Bielefeld University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_030440575.1", "bioproject": "PRJNA224116", "biosample": "SAMN13404516", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "1121356", "species_taxid": "227319", "organism_name": "Corynebacterium ciconiae DSM 44920", "infraspecific_name": "strain=DSM 44920", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/07/12", "asm_name": "ASM3044057v1", "asm_submitter": "Bielefeld University", "gbrs_paired_asm": "GCA_030440575.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/030/440/575/GCF_030440575.1_ASM3044057v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2584365", "genome_size_ungapped": "2584365", "gc_percent": "62.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_030440575.1-RS_2024_07_13", "annotation_date": "2024-07-13", "total_gene_count": "2278", "protein_coding_gene_count": "2196", "non_coding_gene_count": "65", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-07-12", "dateModified": "2023-07-12", "datePublished": "2023-07-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Corynebacterium ciconiae DSM 44920" ], "sample_taxid": [ "1121356" ], "sample_host_organism": [ "Ciconia nigra" ], "sample_host_organism_id": [], "sample_host_disease": [], 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"status": "below_threshold" }, { "organism_name": "Corynebacterium ureicelerivorans", "strain": "strain=IMMIB RIV-2301", "accession": "GCA_000747315.1", "taxid": 401472, "species_taxid": 401472, "relation_to_type": "type", "validated": true, "ani": 78.2728, "matched_fragments": 134, "total_fragments": 861, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium marinum", "strain": "strain=DSM 44953", "accession": "GCA_000835165.1", "taxid": 349751, "species_taxid": 349751, "relation_to_type": "type", "validated": true, "ani": 78.2554, "matched_fragments": 183, "total_fragments": 861, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium testudinoris", "strain": "strain=DSM 44614", "accession": "GCA_001021045.1", "taxid": 136857, "species_taxid": 136857, "relation_to_type": "type", "validated": true, "ani": 78.1998, "matched_fragments": 171, "total_fragments": 861, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium epidermidicanis", "strain": "strain=DSM 45586", "accession": "GCA_001021025.1", "taxid": 1050174, "species_taxid": 1050174, "relation_to_type": "type", "validated": true, "ani": 78.124, "matched_fragments": 114, "total_fragments": 861, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium marinum", "strain": "strain=CGMCC 1.6998", "accession": "GCA_014645275.1", "taxid": 349751, "species_taxid": 349751, "relation_to_type": "type", "validated": true, "ani": 78.0623, "matched_fragments": 182, "total_fragments": 861, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium halotolerans", "strain": "strain=DSM 44683", "accession": "GCA_000688435.1", "taxid": 225326, "species_taxid": 225326, "relation_to_type": "type", "validated": true, "ani": 78.0017, "matched_fragments": 197, "total_fragments": 861, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium 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"strain=2183", "accession": "GCA_003065405.1", "taxid": 2080740, "species_taxid": 2080740, "relation_to_type": "type", "validated": true, "ani": 77.798, "matched_fragments": 166, "total_fragments": 861, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium gottingense", "strain": "strain=DSM 103494", "accession": "GCA_003693265.1", "taxid": 2041036, "species_taxid": 2041036, "relation_to_type": "type", "validated": true, "ani": 77.7411, "matched_fragments": 143, "total_fragments": 861, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium mucifaciens", "strain": "strain=ATCC 700355", "accession": "GCA_012396315.1", "taxid": 57171, "species_taxid": 57171, "relation_to_type": "type", "validated": true, "ani": 77.6735, "matched_fragments": 135, "total_fragments": 861, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium godavarianum", "strain": "strain=LMG 29598", "accession": 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