{ "tc_result": [ { "organism_name": "Deinococcus ficus", "strain": "strain=DSM 19119", "accession": "GCA_000430865.1", "taxid": 317577, "species_taxid": 317577, "relation_to_type": "type", "validated": true, "ani": 97.28, "matched_fragments": 1167, "total_fragments": 1344, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Deinococcus ficus", "strain": "strain=CC-FR2-10", "accession": "GCA_003444775.1", "taxid": 317577, "species_taxid": 317577, "relation_to_type": "type", "validated": true, "ani": 97.233, "matched_fragments": 1172, "total_fragments": 1344, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Deinococcus daejeonensis", "strain": "strain=JCM 16918", "accession": "GCA_014647175.1", "taxid": 1007098, "species_taxid": 1007098, "relation_to_type": "type", "validated": true, "ani": 81.7469, "matched_fragments": 719, "total_fragments": 1344, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Deinococcus xianganensis", "strain": "strain=Y35", "accession": "GCA_009834985.1", "taxid": 1507289, "species_taxid": 1507289, "relation_to_type": "type", "validated": true, "ani": 81.7319, "matched_fragments": 679, "total_fragments": 1344, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Deinococcus actinosclerus", "strain": "strain=BM2", "accession": "GCA_001507665.1", "taxid": 1768108, "species_taxid": 1768108, "relation_to_type": "type", "validated": true, "ani": 81.6941, "matched_fragments": 692, "total_fragments": 1344, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Deinococcus kurensis", "strain": "strain=KR-1", "accession": "GCA_009687825.1", "taxid": 2662757, "species_taxid": 2662757, "relation_to_type": "type", "validated": true, "ani": 81.6712, "matched_fragments": 717, "total_fragments": 1344, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Deinococcus seoulensis", "strain": "strain=JCM 31404", "accession": "GCA_014648115.1", "taxid": 1837379, "species_taxid": 1837379, "relation_to_type": "type", "validated": true, "ani": 81.6215, "matched_fragments": 706, "total_fragments": 1344, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Deinococcus soli (ex Cha et al. 2016)", "strain": "strain=N5", "accession": "GCA_001007995.1", "taxid": 1309411, "species_taxid": 1309411, "relation_to_type": "type", "validated": true, "ani": 81.5995, "matched_fragments": 677, "total_fragments": 1344, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Deinococcus knuensis", "strain": "strain=JCM 31406", "accession": "GCA_014648155.1", "taxid": 1837380, "species_taxid": 1837380, "relation_to_type": "type", "validated": true, "ani": 81.5704, "matched_fragments": 721, "total_fragments": 1344, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Deinococcus grandis", "strain": "strain=ATCC 43672", "accession": "GCA_001485435.1", "taxid": 57498, "species_taxid": 57498, "relation_to_type": "type", "validated": true, "ani": 81.5094, "matched_fragments": 740, "total_fragments": 1344, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Deinococcus arenae", "strain": "strain=JCM 31047", "accession": "GCA_014647995.1", "taxid": 1452751, "species_taxid": 1452751, "relation_to_type": "type", "validated": true, "ani": 81.4876, "matched_fragments": 741, "total_fragments": 1344, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Deinococcus radiotolerans", "strain": "strain=JCM 19173", "accession": "GCA_014647435.1", "taxid": 1309407, "species_taxid": 1309407, "relation_to_type": "type", "validated": true, "ani": 81.1792, "matched_fragments": 721, "total_fragments": 1344, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Deinococcus metalli", "strain": "strain=DSM 27521", "accession": "GCA_014201805.1", "taxid": 1141878, "species_taxid": 1141878, "relation_to_type": "type", "validated": true, "ani": 80.6688, "matched_fragments": 698, "total_fragments": 1344, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Deinococcus radiopugnans", "strain": "strain=ATCC 19172", "accession": "GCA_006335125.1", "taxid": 57497, "species_taxid": 57497, "relation_to_type": "type", "validated": true, "ani": 79.217, "matched_fragments": 606, "total_fragments": 1344, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Deinococcus radiopugnans", "strain": "strain=DSM 12027", "accession": "GCA_014201625.1", "taxid": 57497, "species_taxid": 57497, "relation_to_type": "type", "validated": true, "ani": 79.2154, "matched_fragments": 598, "total_fragments": 1344, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Deinococcus aerolatus", "strain": "strain=JCM 15442", "accession": "GCA_014647055.1", "taxid": 522487, "species_taxid": 522487, "relation_to_type": "type", "validated": true, "ani": 78.9531, "matched_fragments": 565, "total_fragments": 1344, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Deinococcus wulumuqiensis", "strain": "strain=R12", "accession": "GCA_014875835.1", "taxid": 980427, "species_taxid": 980427, "relation_to_type": "type", "validated": true, "ani": 78.8997, "matched_fragments": 469, "total_fragments": 1344, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Deinococcus wulumuqiensis", "strain": "strain=R12", "accession": "GCA_014875875.1", "taxid": 980427, "species_taxid": 980427, "relation_to_type": "type", "validated": true, "ani": 78.8995, "matched_fragments": 459, "total_fragments": 1344, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Deinococcus wulumuqiensis", "strain": "strain=R12", "accession": "GCA_014875975.1", "taxid": 980427, "species_taxid": 980427, "relation_to_type": "type", "validated": true, "ani": 78.8674, "matched_fragments": 488, "total_fragments": 1344, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Deinococcus radiodurans", "strain": "strain=R1", "accession": "GCA_000008565.1", "taxid": 1299, "species_taxid": 1299, "relation_to_type": "type", "validated": true, "ani": 78.6763, "matched_fragments": 449, "total_fragments": 1344, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Deinococcus radiodurans", "strain": "strain=DSM 20539", "accession": "GCA_000685985.1", "taxid": 1299, "species_taxid": 1299, "relation_to_type": "type", "validated": true, "ani": 78.6116, "matched_fragments": 457, "total_fragments": 1344, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 1.85, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_003444775.1", "gtdb_species": "s__Deinococcus ficus", "ani": 97.2525, "matched_fragments": 1171, "total_fragments": 1344, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.33", "min_intra_species_ani": "97.44", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.88", "num_clustered_genomes": 4, "status": "conclusive" }, { "accession": "GCF_002198095.1", "gtdb_species": "s__Deinococcus indicus", "ani": 81.738, "matched_fragments": 715, "total_fragments": 1344, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.28", "min_intra_species_ani": "99.28", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001507665.1", "gtdb_species": "s__Deinococcus actinosclerus", "ani": 81.6934, "matched_fragments": 693, "total_fragments": 1344, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.26", "min_intra_species_ani": "96.21", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_002017875.1", "gtdb_species": "s__Deinococcus sp002017875", "ani": 81.6687, "matched_fragments": 720, "total_fragments": 1344, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.85", "min_intra_species_ani": "96.85", "mean_intra_species_af": "0.84", "min_intra_species_af": "0.84", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014648115.1", "gtdb_species": "s__Deinococcus seoulensis", "ani": 81.6463, "matched_fragments": 704, "total_fragments": 1344, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.69", "min_intra_species_ani": "97.69", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.87", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001007995.1", "gtdb_species": "s__Deinococcus soli", "ani": 81.6254, "matched_fragments": 674, "total_fragments": 1344, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.09", "min_intra_species_ani": "98.03", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.93", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_013337115.1", "gtdb_species": "s__Deinococcus sp013337115", "ani": 81.5969, "matched_fragments": 701, "total_fragments": 1344, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001485435.1", "gtdb_species": "s__Deinococcus grandis", "ani": 81.508, "matched_fragments": 741, "total_fragments": 1344, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.65", "min_intra_species_ani": "95.40", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.83", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_014648135.1", "gtdb_species": "s__Deinococcus sedimenti", "ani": 81.3711, "matched_fragments": 727, "total_fragments": 1344, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014647435.1", "gtdb_species": "s__Deinococcus radiotolerans", "ani": 81.1967, "matched_fragments": 719, "total_fragments": 1344, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014201805.1", "gtdb_species": "s__Deinococcus metalli", "ani": 80.7207, "matched_fragments": 691, "total_fragments": 1344, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014647655.1", "gtdb_species": "s__Deinococcus malanensis", "ani": 79.1393, "matched_fragments": 546, "total_fragments": 1344, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014646915.1", "gtdb_species": "s__Deinococcus aquiradiocola", "ani": 79.0597, "matched_fragments": 508, "total_fragments": 1344, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014647055.1", "gtdb_species": "s__Deinococcus aerolatus", "ani": 78.9351, "matched_fragments": 568, "total_fragments": 1344, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009755355.1", "gtdb_species": "s__Deinococcus sp009755355", "ani": 78.6043, "matched_fragments": 524, "total_fragments": 1344, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_011389865.1", "gtdb_species": "s__JAABTL01 sp011389865", "ani": 75.5003, "matched_fragments": 129, "total_fragments": 1344, "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__JAABTL01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }