{ "type": "genome", "identifier": "GCF_030811375.1", "organism": "Spirilliplanes yamanashiensis", "title": "Spirilliplanes yamanashiensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_030811375.1", "bioproject": "PRJNA224116", "biosample": "SAMN18260313", "wgs_master": "JAUSQT000000000.1", "refseq_category": "reference genome", "taxid": "42233", "species_taxid": "42233", "organism_name": "Spirilliplanes yamanashiensis", "infraspecific_name": "strain=DSM 44325", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/08/18", "asm_name": "ASM3081137v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_030811375.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/030/811/375/GCF_030811375.1_ASM3081137v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6544939", "genome_size_ungapped": "6544939", "gc_percent": "74.500000", "replicon_count": "0", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_030811375.1-RS_2024_08_20", "annotation_date": "2024-08-20", "total_gene_count": "6196", "protein_coding_gene_count": "6057", "non_coding_gene_count": "72", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-08-18", "dateModified": "2023-08-18", "datePublished": "2023-08-18", "_annotation": { "sample_count": 1, "sample_organism": [ "Spirilliplanes yamanashiensis" ], "sample_taxid": [ "42233" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": 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"below_threshold" }, { "organism_name": "Micromonospora palomenae", "strain": "strain=DSM 102131", "accession": "GCA_007829925.1", "taxid": 1461247, "species_taxid": 1461247, "relation_to_type": "type", "validated": true, "ani": 79.8734, "matched_fragments": 1116, "total_fragments": 2181, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes brasiliensis", "strain": "strain=NBRC 13938", "accession": "GCA_016862015.1", "taxid": 52695, "species_taxid": 52695, "relation_to_type": "type", "validated": true, "ani": 79.8277, "matched_fragments": 1187, "total_fragments": 2181, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora carbonacea", "strain": "strain=aurantiaca", "accession": "GCA_013389765.1", "taxid": 47853, "species_taxid": 47853, "relation_to_type": "type", "validated": true, "ani": 79.8255, "matched_fragments": 1142, "total_fragments": 2181, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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"strain": "strain=DSM 43904", "accession": "GCA_900090235.1", "taxid": 47857, "species_taxid": 47857, "relation_to_type": "type", "validated": true, "ani": 79.7588, "matched_fragments": 1146, "total_fragments": 2181, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes subtropicus", "strain": "strain=NRRL B-24665", "accession": "GCA_000721705.1", "taxid": 543632, "species_taxid": 543632, "relation_to_type": "type", "validated": true, "ani": 79.749, "matched_fragments": 1239, "total_fragments": 2181, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora fulviviridis", "strain": "strain=JCM 3259", "accession": "GCA_014648395.1", "taxid": 47860, "species_taxid": 47860, "relation_to_type": "type", "validated": true, "ani": 79.7467, "matched_fragments": 1118, "total_fragments": 2181, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes atraurantiacus", "strain": "strain=CGMCC 4.6857", 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