{ "type": "genome", "identifier": "GCF_030813235.1", "organism": "Cytobacillus purgationiresistens", "title": "Cytobacillus purgationiresistens", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_030813235.1", "bioproject": "PRJNA224116", "biosample": "SAMN18243427", "wgs_master": "JAUSUB000000000.1", "refseq_category": "reference genome", "taxid": "863449", "species_taxid": "863449", "organism_name": "Cytobacillus purgationiresistens", "infraspecific_name": "strain=DSM 23494", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/08/18", "asm_name": "ASM3081323v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_030813235.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/030/813/235/GCF_030813235.1_ASM3081323v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5576037", "genome_size_ungapped": "5576037", "gc_percent": "38.000000", "replicon_count": "0", "scaffold_count": "83", "contig_count": "83", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_030813235.1-RS_2024_08_20", "annotation_date": "2024-08-20", "total_gene_count": "5785", "protein_coding_gene_count": "5496", "non_coding_gene_count": "99", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-08-18", "dateModified": "2023-08-18", "datePublished": "2023-08-18", "_annotation": { "sample_count": 1, "sample_organism": [ "Cytobacillus purgationiresistens" ], "sample_taxid": [ "863449" ], "sample_host_organism": [ "not 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"below_threshold" }, { "organism_name": "Bacillus massiliogorillae", "strain": "strain=G2", "accession": "GCA_000380245.2", "taxid": 1243664, "species_taxid": 1243664, "relation_to_type": "type", "validated": true, "ani": 77.3795, "matched_fragments": 100, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Robertmurraya massiliosenegalensis", "strain": "strain=JC6", "accession": "GCA_000311725.1", "taxid": 1287657, "species_taxid": 1287657, "relation_to_type": "type", "validated": true, "ani": 77.3737, "matched_fragments": 150, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Peribacillus frigoritolerans", "strain": "strain=FJAT-2396", "accession": "GCA_001636405.1", "taxid": 450367, "species_taxid": 450367, "relation_to_type": "type", "validated": true, "ani": 77.2831, "matched_fragments": 103, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bacillus cytotoxicus", "strain": "strain=NVH 391-98", "accession": "GCA_000017425.1", "taxid": 580165, "species_taxid": 580165, "relation_to_type": "type", "validated": true, "ani": 77.1764, "matched_fragments": 60, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neobacillus endophyticus", "strain": "strain=BRMEA1", "accession": "GCA_013248975.1", "taxid": 2738405, "species_taxid": 2738405, "relation_to_type": "type", "validated": true, "ani": 77.1696, "matched_fragments": 115, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Metabacillus flavus", "strain": "strain=KIGAM252", "accession": "GCA_018283675.1", "taxid": 2823519, "species_taxid": 2823519, "relation_to_type": "type", "validated": true, "ani": 77.152, "matched_fragments": 61, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bacillus aquiflavi", "strain": "strain=3H-10", "accession": 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76.8397, "matched_fragments": 53, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lederbergia wuyishanensis", "strain": "strain=CGMCC 1.12709", "accession": "GCA_022900255.1", "taxid": 1347903, "species_taxid": 1347903, "relation_to_type": "type", "validated": true, "ani": 76.4842, "matched_fragments": 82, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_002835735.1", "gtdb_species": "s__Cytobacillus horneckiae", "ani": 79.7148, "matched_fragments": 700, "total_fragments": 1814, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Cytobacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.87", "min_intra_species_ani": "98.22", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 3, 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