{ "type": "genome", "identifier": "GCF_030814835.1", "organism": "Caulobacter ginsengisoli", "title": "Caulobacter ginsengisoli", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_030814835.1", "bioproject": "PRJNA224116", "biosample": "SAMN35367907", "wgs_master": "JAUSVS000000000.1", "refseq_category": "reference genome", "taxid": "400775", "species_taxid": "400775", "organism_name": "Caulobacter ginsengisoli", "infraspecific_name": "strain=DSM 18695", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/08/18", "asm_name": "ASM3081483v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_030814835.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/030/814/835/GCF_030814835.1_ASM3081483v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4813228", "genome_size_ungapped": "4813228", "gc_percent": "68.500000", "replicon_count": "0", "scaffold_count": "23", "contig_count": "23", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_030814835.1-RS_2024_08_20", "annotation_date": "2024-08-20", "total_gene_count": "4799", "protein_coding_gene_count": "4722", "non_coding_gene_count": "50", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-08-18", "dateModified": "2023-08-18", "datePublished": "2023-08-18", "_annotation": { "sample_count": 1, "sample_organism": [ "Caulobacter ginsengisoli" ], "sample_taxid": [ "400775" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"Caulobacter flavus", "strain": "strain=RHGG3", "accession": "GCA_003722335.1", "taxid": 1679497, "species_taxid": 1679497, "relation_to_type": "type", "validated": true, "ani": 79.6692, "matched_fragments": 778, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium glaciei", "strain": "strain=20VBR1", "accession": "GCA_016772415.2", "taxid": 2803784, "species_taxid": 2803784, "relation_to_type": "type", "validated": true, "ani": 79.6541, "matched_fragments": 690, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caulobacter segnis", "strain": "strain=ATCC 21756", "accession": "GCA_000092285.1", "taxid": 88688, "species_taxid": 88688, "relation_to_type": "type", "validated": true, "ani": 79.4955, "matched_fragments": 674, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caulobacter vibrioides", "strain": "strain=DSM 9893", 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