# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_13	LOCUS_00130	sequence1:19471..20175(+)	partial			WP_003976516.1	peroxide stress protein YaaA	80.8	73.8	35.9
MGA_37	LOCUS_00370	sequence1:47973..48884(-)	partial			WP_086852129.1	phosphatidate cytidylyltransferase	90.1	65.4	40.7
MGA_42	LOCUS_00420	sequence1:52601..52912(+)	frameshift		52906	WP_012804633.1	M23 family metallopeptidase	94.2	43.3	44.3
MGA_46	LOCUS_00460	sequence1:56714..57157(-)	partial			WP_030872622.1	YraN family protein	70.7	83.3	38.5
MGA_48	LOCUS_00480	sequence1:57637..58245(-)	partial			WP_012804627.1	ribonuclease HII	97.0	69.5	43.6
MGA_54	LOCUS_00540	sequence1:61891..62343(-)	partial			WP_012804619.1	30S ribosomal protein S16	59.3	56.0	62.9
MGA_57	LOCUS_00570	sequence1:65353..66594(-)	partial			WP_007056312.1	signal recognition particle-docking protein FtsY	73.6	71.1	60.3
MGA_59	LOCUS_00590	sequence1:67178..68785(-)	partial			WP_003973202.1	RNA polymerase sigma factor	66.5	70.3	82.8
MGA_90	LOCUS_00900	sequence1:101031..101261(+)	partial			WP_011262282.1	PTS glucose transporter subunit IIBC	94.7	15.2	43.1
MGA_103	LOCUS_01030	sequence1:123721..124152(-)	partial			WP_012803978.1	winged helix-turn-helix domain-containing protein	69.2	39.4	42.4
MGA_117	LOCUS_01170	sequence1:139137..139478(-)	frameshift		139521	WP_003904572.1	IS256-like element IS1081 family transposase	94.7	26.7	65.8
MGA_118	LOCUS_01180	sequence1:139513..140370(-)	frameshift		139524	WP_003901078.1	IS256-like element IS1081 family transposase	98.9	67.7	63.5
MGA_140	LOCUS_01400	sequence1:164724..165020(-)	partial			WP_011730194.1	hypothetical protein	66.3	63.6	52.2
MGA_149	LOCUS_01490	sequence1:172849..173667(-)	frameshift,internal_stop_codon	173664..173666(-)	173612	WP_005110133.1	F0F1 ATP synthase subunit B/delta	87.5	52.9	27.6
MGA_156	LOCUS_01560	sequence1:177518..178378(-)	partial			WP_003818926.1	peptide chain release factor N(5)-glutamine methyltransferase	80.1	71.1	48.5
MGA_159	LOCUS_01590	sequence1:180295..181998(-)	partial			WP_015775956.1	transcription termination factor Rho	66.1	55.4	72.9
MGA_163	LOCUS_01630	sequence1:186979..187230(+)	partial			WP_013582507.1	formate C-acetyltransferase	78.3	8.2	75.4
MGA_175	LOCUS_01740	sequence1:198128..198958(-)	partial			WP_011730970.1	hypothetical protein	29.3	37.1	42.4
MGA_181	LOCUS_01800	sequence1:205169..205861(+)	partial			WP_011729921.1	type II toxin-antitoxin system PemK/MazF family toxin	61.7	63.5	43.0
MGA_183	LOCUS_01820	sequence1:207414..207737(+)	partial			WP_099049969.1	IS3 family transposase	67.3	15.9	43.1
MGA_187	LOCUS_01860	sequence1:212585..214108(-)	partial			WP_011028431.1	ComEC/Rec2 family competence protein	57.2	34.7	32.4
MGA_189	LOCUS_01880	sequence1:215073..217025(+)	partial			WP_011730039.1	DUF853 family protein	67.8	83.9	55.7
MGA_192	LOCUS_01910	sequence1:219508..220608(-)	partial			WP_013532575.1	peptidase C39 family protein	47.3	47.3	33.9
MGA_200	LOCUS_01990	sequence1:231312..233798(+)	partial			WP_235190714.1	FxSxx-COOH system tetratricopeptide repeat protein	50.1	53.3	45.2
MGA_235	LOCUS_02340	sequence1:280732..280965(-)	partial			WP_013229800.1	Pr6Pr family membrane protein	94.8	35.6	43.8
MGA_239	LOCUS_02380	sequence1:282365..283084(-)	partial			WP_013229800.1	Pr6Pr family membrane protein	67.8	78.0	41.7
MGA_241	LOCUS_02400	sequence1:284037..284933(-)	frameshift,internal_stop_codon	284066..284068(-)	284210	WP_011336772.1	ABC transporter ATP-binding protein	76.2	42.1	49.3
MGA_256	LOCUS_02550	sequence1:299185..299865(+)	partial			WP_013223128.1	type 1 glutamine amidotransferase	84.5	73.8	40.4
MGA_274	LOCUS_02730	sequence1:318317..319297(-)	partial			WP_012803857.1	aminoglycoside phosphotransferase family protein	92.0	38.3	31.2
MGA_275	LOCUS_02740	sequence1:319288..320415(-)	partial			WP_012803857.1	aminoglycoside phosphotransferase family protein	95.7	47.9	26.0
MGA_283	LOCUS_02820	sequence1:330255..331475(+)	frameshift		331226,331524,331262,331455	WP_011030423.1	type VII secretion-associated serine protease mycosin	86.7	81.6	28.8
MGA_324	LOCUS_03230	sequence1:380513..380689(-)	internal_stop_codon	380330..380332(-),380513..380515(-)		WP_015776578.1	ISL3 family transposase	94.8	12.6	69.1
MGA_341	LOCUS_03400	sequence1:402832..403887(-)	partial			WP_011389621.1	peptidoglycan DD-metalloendopeptidase family protein	39.9	28.7	40.0
MGA_350	LOCUS_03490	sequence1:414680..415564(-)	partial			WP_013531164.1	alpha/beta hydrolase	79.6	73.7	34.7
MGA_369	LOCUS_03680	sequence1:432069..432485(+)	partial			WP_015776074.1	LysM peptidoglycan-binding domain-containing protein	83.3	39.6	36.5
MGA_375	LOCUS_03740	sequence1:439306..440937(-)	partial			WP_011028715.1	two-component system sensor histidine kinase MtrB	92.1	74.4	35.7
MGA_377	LOCUS_03760	sequence1:441743..443002(+)	partial			WP_003419768.1	membrane protein	73.5	66.5	30.4
MGA_384	LOCUS_03830	sequence1:449204..449695(-)	partial			WP_086677666.1	DUF3499 domain-containing protein	62.0	84.6	54.5
MGA_385	LOCUS_03840	sequence1:449843..450148(+)	partial			WP_015776092.1	metallopeptidase family protein	82.2	54.3	40.5
MGA_388	LOCUS_03870	sequence1:454844..455140(-)	partial			WP_003975777.1	WhiB family transcriptional regulator	63.3	71.3	80.6
MGA_394	LOCUS_03930	sequence1:460488..461534(+)	partial			WP_003242519.1	glycosyltransferase family 2 protein	56.3	68.7	30.1
MGA_395	LOCUS_03940	sequence1:461622..463163(-)	partial			WP_001035315.1	pneumococcal surface protein A	36.8	30.0	39.9
MGA_402	LOCUS_04010	sequence1:470870..471856(-)	partial			WP_176742155.1	glycosyltransferase family 2 protein	84.1	73.3	31.8
MGA_403	LOCUS_04020	sequence1:471853..472950(-)	partial			WP_012257167.1	glycosyltransferase family 1 protein	76.4	74.1	36.4
MGA_418	LOCUS_04170	sequence1:493271..494347(+)	partial			WP_012805126.1	transaldolase	55.9	55.3	33.8
MGA_435	LOCUS_04340	sequence1:515569..517344(+)	partial			WP_012804750.1	DEAD/DEAH box helicase	75.0	76.3	63.0
MGA_436	LOCUS_04350	sequence1:518631..519608(-)	partial			WP_083531262.1	DUF262 domain-containing protein	51.4	20.3	35.1
MGA_438	LOCUS_04370	sequence1:520783..521295(-)	frameshift		520845	WP_111723549.1	IS3 family transposase	92.9	36.9	31.1
MGA_450	LOCUS_04490	sequence1:533846..534586(-)	partial			WP_013223700.1	hypothetical protein	53.7	75.3	33.3
MGA_455	LOCUS_04540	sequence1:538595..538759(-)	partial			WP_003966491.1	DUF3117 domain-containing protein	75.9	74.5	82.9
MGA_456	LOCUS_04550	sequence1:538949..539677(-)	partial			WP_013390060.1	TIGR00730 family Rossman fold protein	96.3	74.4	64.8
MGA_463	LOCUS_04620	sequence1:546130..547179(-)	partial			WP_164929929.1	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	96.0	64.6	55.4
MGA_470	LOCUS_04690	sequence1:554123..555562(-)	partial			WP_011068603.1	G5 domain-containing protein	20.0	19.3	55.2
MGA_474	LOCUS_04730	sequence1:558711..562133(-)	partial			WP_029414652.1	ABC transporter ATP-binding protein/permease	57.1	71.9	41.5
MGA_482	LOCUS_04810	sequence1:569242..569718(+)	partial			WP_003976986.1	Asp23/Gls24 family envelope stress response protein	70.9	70.6	51.3
MGA_491	LOCUS_04900	sequence1:574365..575198(+)	partial			WP_011393147.1	class I SAM-dependent methyltransferase	35.7	37.3	41.8
MGA_498	LOCUS_04970	sequence1:581295..581717(+)	internal_stop_codon	581235..581237(+)		WP_013528655.1	ABC transporter permease	95.0	35.2	30.8
MGA_501	LOCUS_05000	sequence1:583730..583993(-)	frameshift		584013	WP_003229892.1	GNAT family N-acetyltransferase	89.7	43.8	55.6
MGA_507	LOCUS_05060	sequence1:588548..589168(+)	partial			WP_010877094.1	flavodoxin domain-containing protein	68.4	44.4	35.5
MGA_517	LOCUS_05160	sequence1:596303..596575(+)	partial			WP_005809845.1	type II toxin-antitoxin system RelB/DinJ family antitoxin	58.9	55.2	45.3
MGA_525	LOCUS_05240	sequence1:606421..609210(-)	partial			WP_012804532.1	UvrD-helicase domain-containing protein	35.6	39.8	40.9
MGA_547	LOCUS_05460	sequence1:634543..634857(-)	frameshift,internal_stop_codon	634543..634545(-)	634476	WP_013223345.1	IS3 family transposase	94.2	32.1	41.8
MGA_551	LOCUS_05500	sequence1:644215..645816(-)	partial			WP_011393751.1	alcohol dehydrogenase catalytic domain-containing protein	37.9	52.0	27.3
MGA_553	LOCUS_05520	sequence1:646967..648274(-)	partial			WP_007054041.1	PHP domain-containing protein	72.0	82.2	26.5
MGA_565	LOCUS_05640	sequence1:663568..663924(-)	partial			WP_164930294.1	MGMT family protein	62.7	64.9	52.7
MGA_592	LOCUS_05910	sequence1:692811..693365(+)	partial			WP_013399385.1	GntR family transcriptional regulator	100.0	69.4	42.9
MGA_604	LOCUS_06020	sequence1:704909..705886(-)	partial			WP_011029738.1	NADH-quinone oxidoreductase subunit J	73.5	81.8	39.3
MGA_618	LOCUS_06160	sequence1:720212..721384(+)	partial			WP_029414605.1	S8 family serine peptidase	52.3	37.2	29.9
MGA_621	LOCUS_06190	sequence1:723615..725075(-)	partial			WP_011068543.1	trypsin-like peptidase domain-containing protein	98.6	72.6	40.0
MGA_640	LOCUS_06380	sequence1:749738..750817(-)	partial			WP_013223320.1	RHS repeat-associated core domain-containing protein	60.4	14.3	25.0
MGA_643	LOCUS_06410	sequence1:752988..754184(-)	partial			WP_003233171.1	subtilisin AprE	68.6	68.2	27.5
MGA_644	LOCUS_06420	sequence1:754181..755608(-)	partial			WP_003977220.1	type VII secretion-associated serine protease mycosin	63.8	74.6	36.0
MGA_645	LOCUS_06430	sequence1:755605..757056(-)	partial			WP_013224123.1	type VII secretion protein EccB	62.5	63.0	29.7
MGA_655	LOCUS_06530	sequence1:770747..771982(+)	partial			WP_010903921.1	S8 family peptidase	73.5	56.8	26.2
MGA_656	LOCUS_06540	sequence1:771987..773195(+)	partial			WP_010903921.1	S8 family peptidase	80.1	61.5	24.0
MGA_657	LOCUS_06550	sequence1:773334..774839(-)	partial			WP_015776165.1	serine/threonine-protein kinase	55.1	50.3	39.1
MGA_658	LOCUS_06560	sequence1:774839..777394(-)	partial			WP_000631786.1	transglutaminaseTgpA domain-containing protein	15.0	18.2	34.8
MGA_690	LOCUS_06880	sequence1:823280..824599(-)	partial			WP_007054710.1	Fe-S-containing protein	71.1	74.6	37.2
MGA_694	LOCUS_06920	sequence1:827572..828225(+)	partial			WP_000426696.1	CPBP family intramembrane metalloprotease SdpB	41.9	38.0	36.2
MGA_699	LOCUS_06970	sequence1:835789..838464(-)	partial			WP_013389584.1	transglutaminase domain-containing protein	73.1	71.7	26.1
MGA_733	LOCUS_07310	sequence1:877868..878329(+)	partial			WP_164930002.1	MarR family transcriptional regulator	79.7	67.8	38.7
MGA_741	LOCUS_07390	sequence1:886564..887700(+)	partial			WP_011204021.1	lyase family protein	36.5	15.8	33.8
MGA_744	LOCUS_07420	sequence1:891095..891907(-)	partial			WP_011029074.1	dTMP kinase	91.1	22.4	47.8
MGA_756	LOCUS_07540	sequence1:906743..907255(-)	frameshift		906805	WP_111723549.1	IS3 family transposase	92.9	36.9	31.1
MGA_757	LOCUS_07550	sequence1:907520..909130(+)	partial			WP_011068233.1	glycoside hydrolase family 2 TIM barrel-domain containing protein	79.5	48.0	28.9
MGA_762	LOCUS_07600	sequence1:918327..919550(-)	partial			WP_029414605.1	S8 family serine peptidase	75.7	64.1	27.6
MGA_763	LOCUS_07610	sequence1:919556..920782(-)	partial			WP_029414605.1	S8 family serine peptidase	72.1	61.7	28.1
MGA_767	LOCUS_07650	sequence1:923617..924303(-)	partial			WP_173943903.1	NTP transferase domain-containing protein	82.0	56.0	31.0
MGA_768	LOCUS_07660	sequence1:924309..925133(-)	partial			WP_013223024.1	adenylyltransferase/sulfurtransferase MoeZ	88.3	61.6	41.7
MGA_787	LOCUS_07850	sequence1:947565..947936(-)	partial			WP_012870206.1	fluoride efflux transporter CrcB	69.1	69.4	38.9
MGA_804	LOCUS_08020	sequence1:966939..967658(+)	partial			WP_013223406.1	ABC transporter ATP-binding protein	91.2	72.9	52.8
MGA_808	LOCUS_08060	sequence1:970476..971324(-)	partial			WP_013226968.1	VanZ family protein	58.5	37.4	32.2
MGA_809	LOCUS_08070	sequence1:971500..972237(-)	partial			WP_013390253.1	DUF1524 domain-containing protein	66.5	47.4	59.5
MGA_814	LOCUS_08120	sequence1:979026..979319(+)	partial			WP_016326153.1	YtxH domain-containing protein	68.0	65.3	40.9
MGA_817	LOCUS_08150	sequence1:981795..986807(+)	partial			WP_011731383.1	ATP-dependent RNA helicase HrpA	61.9	67.5	44.3
MGA_821	LOCUS_08190	sequence1:988752..990092(+)	partial			WP_009936521.1	cytochrome c biogenesis protein DipZ	98.7	62.0	40.6
MGA_850	LOCUS_08480	sequence1:1025967..1026875(+)	partial			WP_011393971.1	ATP-binding protein	70.2	45.8	29.6
MGA_851	LOCUS_08490	sequence1:1026993..1027526(-)	partial			WP_013531371.1	OmpA family protein	66.7	55.1	42.9
MGA_856	LOCUS_08540	sequence1:1031394..1032959(-)	partial			WP_029104227.1	AAA family ATPase	64.9	83.5	52.9
MGA_866	LOCUS_08640	sequence1:1041037..1042914(+)	partial			WP_011068567.1	serine/threonine-protein kinase	41.9	82.9	48.9
MGA_870	LOCUS_08680	sequence1:1048029..1048184(-)	partial			WP_015776676.1	hypothetical protein	100.0	71.8	43.1
MGA_873	LOCUS_08710	sequence1:1049628..1050041(+)	partial			WP_013389385.1	cell division protein CrgA	54.7	50.3	46.1
MGA_877	LOCUS_08750	sequence1:1052708..1053310(+)	partial			WP_012803862.1	hypothetical protein	49.5	38.2	31.0
MGA_888	LOCUS_08860	sequence1:1060811..1062277(+)	partial			WP_008783579.1	adenosylhomocysteinase	73.0	70.6	41.0
MGA_903	LOCUS_09010	sequence1:1076247..1077125(+)	partial			WP_003903979.1	recombinase family protein	93.5	57.1	23.7
MGA_908	LOCUS_09060	sequence1:1081879..1082490(-)	frameshift		1081812,1081887	WP_034254716.1	IS1249 family transposase	97.5	51.7	47.5
MGA_926	LOCUS_09240	sequence1:1098889..1099695(-)	partial			WP_011013645.1	bifunctional uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase	95.9	44.8	32.5
MGA_941	LOCUS_09390	sequence1:1118411..1118824(+)	partial			WP_004114048.1	NUDIX domain-containing protein	87.6	47.2	55.0
MGA_943	LOCUS_09410	sequence1:1121267..1124281(+)	partial			WP_015777147.1	lipid II flippase MurJ	44.2	76.2	30.8
MGA_950	LOCUS_09480	sequence1:1128369..1128677(+)	frameshift		1128264,1128289	WP_068319765.1	ISL3 family transposase	97.1	23.4	42.2
MGA_954	LOCUS_09510	sequence1:1132354..1133232(+)	partial			WP_007051458.1	DUF2974 domain-containing protein	69.9	46.4	30.4
MGA_955	LOCUS_09520	sequence1:1133727..1134119(-)	partial			WP_012803675.1	DUF3566 domain-containing protein	90.8	58.7	44.9
MGA_959	LOCUS_09560	sequence1:1140382..1141176(-)	partial			WP_003855338.1	DUF721 domain-containing protein	48.9	73.0	40.0
MGA_965	LOCUS_09620	sequence1:1146309..1146653(+)	partial			WP_003975049.1	membrane protein insertion efficiency factor YidD	57.0	52.4	61.5
MGA_977	LOCUS_09740	sequence1:1159550..1161163(+)	partial			WP_009993979.1	anchored repeat ABC transporter, substrate-binding protein	71.3	59.3	44.8
MGA_978	LOCUS_09750	sequence1:1161490..1162626(+)	partial			WP_004113720.1	choice-of-anchor M domain-containing protein	60.8	49.1	34.8
MGA_983	LOCUS_09800	sequence1:1166450..1167598(+)	partial			WP_011030414.1	type VII secretion-associated serine protease mycosin	66.8	62.7	28.7
MGA_992	LOCUS_09890	sequence1:1174261..1174740(-)	frameshift		1174323,1174198,1174310	WP_011726739.1	ISL3-like element IS1096 family transposase	61.0	21.6	40.8
MGA_993	LOCUS_09900	sequence1:1175469..1175864(-)	frameshift,internal_stop_codon	1175468..1175470(-),1175188..1175190(-)	1175290,1175579,1175684	WP_085976939.1	IS3 family transposase	96.9	32.8	52.3
MGA_995	LOCUS_09920	sequence1:1176588..1177310(+)	partial			WP_011108247.1	DNA adenine methylase	92.1	56.0	29.5
MGA_996	LOCUS_09930	sequence1:1177294..1178319(+)	partial			WP_001185518.1	ParB/RepB/Spo0J family partition protein	46.6	52.2	30.8
MGA_999	LOCUS_09960	sequence1:1179783..1179950(+)	frameshift,internal_stop_codon	1179723..1179725(+)	1179649	WP_068319765.1	ISL3 family transposase	90.9	11.5	64.0
MGA_1000	LOCUS_09970	sequence1:1179933..1180205(-)	frameshift,internal_stop_codon	1180413..1180415(-)	1180248,1180363,1180488	WP_011726739.1	ISL3-like element IS1096 family transposase	95.6	19.5	73.3
MGA_1002	LOCUS_09990	sequence1:1181071..1181406(+)	frameshift,internal_stop_codon	1181050..1181052(+)	1181115,1181061	WP_221443071.1	hypothetical protein	77.5	48.3	38.4
MGA_1008	LOCUS_10050	sequence1:1189829..1190641(+)	partial			WP_012259444.1	HIT family protein	38.1	76.3	40.8
MGA_1054	LOCUS_10510	sequence1:1239762..1240355(+)	partial			WP_003898102.1	AAA family ATPase	67.0	79.7	46.4
MGA_1057	LOCUS_10540	sequence1:1242755..1243084(-)	partial			WP_164921943.1	DUF2185 domain-containing protein	77.1	73.0	33.3
MGA_1059	LOCUS_10560	sequence1:1243651..1246242(-)	partial			WP_015064514.1	DUF4150 domain-containing protein	12.7	34.5	40.2
MGA_1063	LOCUS_10600	sequence1:1248775..1250286(+)	internal_stop_codon	1250284..1250286(+)		WP_000357579.1	S8 family serine peptidase	49.5	21.7	28.8
MGA_1064	LOCUS_10610	sequence1:1250296..1253340(+)	partial			WP_226990688.1	leucine-rich repeat protein	32.9	18.6	32.0
MGA_1065	LOCUS_10620	sequence1:1253563..1257369(+)	partial			WP_140224017.1	S8 family serine peptidase	63.6	48.2	28.5
MGA_1066	LOCUS_10630	sequence1:1257574..1261371(+)	partial			WP_140224017.1	S8 family serine peptidase	64.3	49.0	29.0
MGA_1067	LOCUS_10640	sequence1:1261604..1265425(+)	partial			WP_140224017.1	S8 family serine peptidase	63.0	48.0	28.9
MGA_1068	LOCUS_10650	sequence1:1265658..1269482(+)	partial			WP_011837426.1	S8 family serine peptidase	75.4	64.4	28.4
MGA_1077	LOCUS_10740	sequence1:1280958..1281470(-)	frameshift		1281020	WP_111723549.1	IS3 family transposase	92.9	36.9	31.1
MGA_1082	LOCUS_10790	sequence1:1286657..1287256(+)	partial			WP_005808295.1	TetR/AcrR family transcriptional regulator	33.2	32.4	45.5
MGA_1087	LOCUS_10840	sequence1:1290631..1291509(+)	partial			WP_012804310.1	glycosyltransferase	87.3	66.1	34.0
MGA_1088	LOCUS_10850	sequence1:1291506..1293200(+)	partial			WP_164929884.1	DUF2079 domain-containing protein	57.8	63.1	41.9
MGA_1090	LOCUS_10870	sequence1:1294377..1296953(-)	partial			WP_011730259.1	heavy metal translocating P-type ATPase	57.3	65.1	48.0
MGA_1093	LOCUS_10900	sequence1:1297737..1299227(+)	partial			WP_015777107.1	hypothetical protein	41.1	45.0	28.0
MGA_1107	LOCUS_11040	sequence1:1312763..1313113(+)	partial			WP_015776606.1	WhiB family transcriptional regulator	69.8	79.4	53.1
MGA_1120	LOCUS_11170	sequence1:1323941..1324372(+)	partial			WP_015776587.1	flp pilus-assembly TadE/G-like family protein	64.3	79.1	39.6
MGA_1124	LOCUS_11210	sequence1:1328477..1329571(+)	partial			WP_015776590.1	phosphatase PAP2 family protein	52.5	58.8	33.8
MGA_1129	LOCUS_11260	sequence1:1334321..1335145(+)	partial			WP_003114930.1	anaerobic ribonucleoside-triphosphate reductase activating protein	70.1	82.3	49.0
MGA_1135	LOCUS_11320	sequence1:1341437..1342942(-)	frameshift		1343117	WP_082793861.1	multicopper oxidase domain-containing protein	90.0	49.3	42.4
MGA_1136	LOCUS_11330	sequence1:1342935..1344233(-)	partial			WP_082793861.1	multicopper oxidase domain-containing protein	86.6	40.3	29.3
MGA_1139	LOCUS_11360	sequence1:1346368..1347954(+)	partial			WP_011731247.1	alpha/beta hydrolase	71.2	71.5	26.4
MGA_1145	LOCUS_11420	sequence1:1355930..1363318(+)	partial			WP_012256318.1	SdrD B-like domain-containing protein	57.2	25.4	27.3
MGA_1146	LOCUS_11430	sequence1:1363596..1365047(-)	partial			WP_001035315.1	pneumococcal surface protein A	41.2	31.7	48.5
MGA_1160	LOCUS_11560	sequence1:1380907..1381743(+)	partial			WP_015704872.1	macrolide ABC transporter ATP-binding protein/permease MacB	88.1	37.7	48.6
MGA_1161	LOCUS_11570	sequence1:1381740..1383071(+)	partial			WP_000054370.1	ABC transporter permease	62.3	69.0	25.0
MGA_1164	LOCUS_11600	sequence1:1384788..1385609(+)	partial			WP_008782692.1	NINE protein	68.5	84.4	33.5
MGA_1168	LOCUS_11640	sequence1:1388181..1390676(-)	partial			WP_042510614.1	(Fe-S)-binding protein	90.6	65.1	39.5
MGA_1171	LOCUS_11670	sequence1:1393890..1394171(-)	partial			WP_007054547.1	DUF3073 domain-containing protein	81.7	63.6	40.2
MGA_1174	LOCUS_11700	sequence1:1395397..1397157(-)	partial			WP_061915636.1	ABC transporter ATP-binding protein	32.9	80.1	32.2
MGA_1181	LOCUS_11770	sequence1:1406015..1409491(+)	partial			WP_036462640.1	mechanosensitive ion channel	26.9	73.3	42.9
MGA_1189	LOCUS_11850	sequence1:1420057..1421316(+)	partial			WP_015776549.1	NUDIX hydrolase	43.9	51.3	38.2
MGA_1190	LOCUS_11860	sequence1:1421364..1421813(-)	partial			WP_011030057.1	DUF4190 domain-containing protein	79.9	33.0	29.8
MGA_1192	LOCUS_11880	sequence1:1422325..1422762(-)	partial			WP_011727219.1	septum formation family protein	68.3	52.2	32.3
MGA_1199	LOCUS_11950	sequence1:1430781..1433663(+)	partial			WP_011263020.1	LruC domain-containing protein	21.6	24.1	28.9
MGA_1220	LOCUS_12160	sequence1:1456852..1457274(+)	partial			WP_003976827.1	RNA-binding S4 domain-containing protein	83.6	64.0	55.5
MGA_1240	LOCUS_12360	sequence1:1474554..1476926(-)	partial			WP_002681576.1	alpha-L-fucosidase	43.5	62.8	40.3
MGA_1253	LOCUS_12490	sequence1:1494743..1495525(+)	partial			WP_013230338.1	TetR/AcrR family transcriptional regulator	63.8	79.3	31.9
MGA_1256	LOCUS_12520	sequence1:1497356..1500352(+)	partial			WP_004113720.1	choice-of-anchor M domain-containing protein	17.4	35.5	31.5
MGA_1265	LOCUS_12610	sequence1:1508545..1509234(+)	partial			WP_010933558.1	hypothetical protein	84.3	45.9	25.9
MGA_1289	LOCUS_12850	sequence1:1533604..1534143(+)	partial			WP_141632568.1	PIG-L family deacetylase	84.9	62.7	48.1
MGA_1298	LOCUS_12940	sequence1:1544182..1544502(-)	frameshift,internal_stop_codon	1544623..1544625(-),1544667..1544669(-)	1544580	WP_011726739.1	ISL3-like element IS1096 family transposase	52.8	12.7	69.6
MGA_1309	LOCUS_13050	sequence1:1557689..1558450(+)	partial			WP_013390192.1	C40 family peptidase	49.8	51.5	43.5
MGA_1316	LOCUS_13120	sequence1:1565936..1566580(-)	partial			WP_003814444.1	5-formyltetrahydrofolate cyclo-ligase	62.6	62.2	40.3
MGA_1355	LOCUS_13500	sequence1:1610891..1612009(+)	frameshift,internal_stop_codon	1612008..1612010(+)	1611188	WP_012028020.1	glycoside hydrolase family 3 protein	71.2	25.8	40.7
MGA_1356	LOCUS_13510	sequence1:1612154..1612909(+)	internal_stop_codon	1612007..1612009(+)		WP_046463317.1	glycoside hydrolase family 3 C-terminal domain-containing protein	48.6	13.1	29.8
MGA_1357	LOCUS_13520	sequence1:1612921..1613841(+)	frameshift		1612867	WP_012028020.1	glycoside hydrolase family 3 protein	88.6	27.5	51.1
MGA_1364	LOCUS_13590	sequence1:1620318..1620968(+)	partial			WP_015776376.1	50S ribosomal protein L4	95.8	66.3	63.3
MGA_1374	LOCUS_13690	sequence1:1625030..1625461(+)	partial			WP_015776365.1	50S ribosomal protein L24	74.8	75.8	57.0
MGA_1380	LOCUS_13750	sequence1:1627617..1628306(+)	partial			WP_015776360.1	30S ribosomal protein S5	71.2	71.8	79.8
MGA_1390	LOCUS_13850	sequence1:1635031..1635600(+)	partial			WP_011013732.1	50S ribosomal protein L17	62.4	71.8	66.9
MGA_1400	LOCUS_13950	sequence1:1646470..1649208(+)	partial			WP_013226436.1	glycoside hydrolase family 2 TIM barrel-domain containing protein	64.1	56.5	44.0
MGA_1404	LOCUS_13990	sequence1:1652894..1656580(+)	partial			WP_001035315.1	pneumococcal surface protein A	15.2	29.7	51.3
MGA_1418	LOCUS_14130	sequence1:1670489..1672060(-)	partial			WP_013226722.1	alpha/beta hydrolase-fold protein	45.1	60.6	28.6
MGA_1419	LOCUS_14140	sequence1:1672072..1674720(-)	partial			WP_003856739.1	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	60.9	62.4	33.5
MGA_1425	LOCUS_14200	sequence1:1679490..1680413(+)	partial			WP_013222679.1	MerR family transcriptional regulator	74.3	77.1	27.5
MGA_1431	LOCUS_14260	sequence1:1687438..1689804(+)	partial			WP_011015235.1	SpnA family nuclease	81.0	67.6	41.5
MGA_1435	LOCUS_14300	sequence1:1695055..1696194(+)	partial			WP_015776142.1	ABC transporter permease	94.7	74.3	40.1
MGA_1444	LOCUS_14390	sequence1:1704293..1704664(+)	partial			WP_013390040.1	cupin domain-containing protein	91.9	55.7	51.3
MGA_1456	LOCUS_14510	sequence1:1718332..1719810(-)	partial			WP_165446556.1	phosphate acetyltransferase	66.3	46.9	67.2
MGA_1504	LOCUS_14990	sequence1:1761227..1761568(+)	frameshift		1761217,1761373	WP_011726739.1	ISL3-like element IS1096 family transposase	51.3	13.2	56.9
MGA_1506	LOCUS_15010	sequence1:1762515..1768076(-)	partial			WP_003899759.1	outer membrane channel protein/necrotizing toxin glycohydrolase CpnT	9.6	18.6	31.5
MGA_1516	LOCUS_15110	sequence1:1776624..1777532(+)	partial			WP_010944069.1	glycosyltransferase	69.5	63.9	30.9
MGA_1518	LOCUS_15130	sequence1:1778884..1780215(+)	partial			WP_010878124.1	glycosyltransferase family 2 protein	51.9	71.4	25.3
MGA_1522	LOCUS_15170	sequence1:1783959..1787408(+)	partial			WP_172992225.1	lamin tail domain-containing protein	11.8	9.9	30.3
MGA_1523	LOCUS_15180	sequence1:1787644..1791099(+)	partial			WP_172992225.1	lamin tail domain-containing protein	15.0	12.7	28.5
MGA_1525	LOCUS_15200	sequence1:1793534..1794229(-)	partial			WP_012803920.1	sugar transferase	86.1	40.8	52.3
MGA_1536	LOCUS_15310	sequence1:1807525..1808274(+)	partial			WP_029414620.1	septum formation initiator family protein	56.6	79.1	33.3
MGA_1544	LOCUS_15390	sequence1:1814530..1815213(-)	partial			WP_015776304.1	hemolysin III family protein	90.7	74.6	54.9
MGA_1547	LOCUS_15420	sequence1:1817220..1817450(-)	frameshift,internal_stop_codon	1817447..1817449(-)	1817416	WP_015776297.1	exodeoxyribonuclease VII small subunit	80.3	58.7	55.7
MGA_1552	LOCUS_15470	sequence1:1822155..1824287(+)	partial			WP_012775094.1	AAA family ATPase	42.5	52.7	61.6
MGA_1554	LOCUS_15490	sequence1:1825392..1825997(+)	frameshift		1825967	WP_011204925.1	class I SAM-dependent DNA methyltransferase	82.6	26.9	33.7
MGA_1566	LOCUS_15610	sequence1:1839939..1840946(+)	partial			WP_011031057.1	hypothetical protein	72.5	83.8	42.7
MGA_1578	LOCUS_15730	sequence1:1856287..1856475(-)	partial			WP_013223223.1	hypothetical protein	90.3	73.7	48.2
MGA_1588	LOCUS_15830	sequence1:1862423..1863334(+)	partial			WP_015776124.1	ATP-binding protein	99.0	61.2	43.2
MGA_1605	LOCUS_16000	sequence1:1879476..1881536(+)	partial			WP_000458116.1	choline-binding protein CbpA	32.5	31.2	45.3
MGA_1613	LOCUS_16080	sequence1:1888823..1889998(-)	partial			WP_000031017.1	Mph(B) family macrolide 2'-phosphotransferase	33.0	43.4	29.0
MGA_1616	LOCUS_16110	sequence1:1892216..1893112(+)	partial			WP_015776056.1	type II secretion system F family protein	77.9	73.6	43.2
MGA_1617	LOCUS_16120	sequence1:1893128..1893298(+)	partial			WP_015776055.1	hypothetical protein	67.9	43.2	65.8
MGA_1629	LOCUS_16240	sequence1:1907295..1908425(-)	partial			WP_012256572.1	XRE family transcriptional regulator	79.5	70.6	31.1
MGA_1638	LOCUS_16330	sequence1:1914801..1921442(+)	partial			WP_011674840.1	PII-type proteinase	59.7	68.0	24.7
MGA_1639	LOCUS_16340	sequence1:1921915..1924659(+)	partial			WP_000458116.1	choline-binding protein CbpA	21.6	27.1	47.2
MGA_1640	LOCUS_16350	sequence1:1925226..1929206(+)	partial			WP_140224017.1	S8 family serine peptidase	62.8	48.5	27.0
MGA_1646	LOCUS_16410	sequence1:1936736..1938517(-)	partial			WP_013226492.1	ABC transporter substrate-binding protein	67.3	58.5	26.3
MGA_1655	LOCUS_16500	sequence1:1947631..1947867(+)	partial			WP_015776026.1	ATP-dependent Clp protease adapter ClpS	91.0	66.4	67.6
MGA_1677	LOCUS_16720	sequence1:1972090..1972629(+)	frameshift		1972037	WP_016507544.1	sulfite exporter TauE/SafE family protein	93.3	60.9	38.9
MGA_1680	LOCUS_16750	sequence1:1975999..1976421(-)	frameshift		1976073	WP_015064487.1	dihydrofolate reductase	82.9	62.4	44.8
MGA_1686	LOCUS_16810	sequence1:1980387..1983419(-)	partial			WP_015776163.1	FtsK/SpoIIIE domain-containing protein	22.4	14.9	46.1
MGA_1700	LOCUS_16950	sequence1:2006054..2008276(+)	partial			WP_013390360.1	exo-alpha-sialidase	73.6	65.5	51.0
MGA_1709	LOCUS_17040	sequence1:2017721..2020537(+)	partial			WP_152204006.1	translation initiation factor IF-2	67.0	73.6	78.7
MGA_1731	LOCUS_17260	sequence1:2043137..2043763(+)	partial			WP_134111881.1	recombination regulator RecX	74.0	59.2	44.8
MGA_1767	LOCUS_17620	sequence1:2084287..2084739(+)	partial			WP_012804707.1	cell division protein SepF	74.7	68.5	54.5
MGA_1796	LOCUS_17910	sequence1:2112199..2115735(+)	partial			WP_002681576.1	alpha-L-fucosidase	25.6	62.8	43.1
MGA_1802	LOCUS_17970	sequence1:2124131..2126869(+)	frameshift,internal_stop_codon	2124413..2124415(+),2124081..2124083(+),2124013..2124015(+)	2124448,2124576,2124098,2124482,2124264,2124654,2124406,2124090	WP_011028446.1	Rne/Rng family ribonuclease	82.3	53.5	49.6
MGA_1811	LOCUS_18060	sequence1:2134154..2135908(+)	partial			WP_011861688.1	cell wall-binding protein Cwp11	25.5	26.3	28.7
MGA_1812	LOCUS_18070	sequence1:2136146..2137075(+)	partial			WP_001035315.1	pneumococcal surface protein A	59.9	32.6	42.6
MGA_1828	LOCUS_18220	sequence1:2157020..2158030(-)	partial			WP_005815046.1	permease	91.1	59.9	37.3
MGA_1838	LOCUS_18320	sequence1:2168582..2172190(+)	partial			WP_013223795.1	chromosome segregation protein SMC	60.7	59.6	40.7
MGA_1843	LOCUS_18370	sequence1:2175376..2175837(-)	partial			WP_005057215.1	hypothetical protein	34.6	82.8	56.6
MGA_1884	LOCUS_18780	sequence1:2225180..2227096(+)	partial			WP_013230460.1	PrsW family intramembrane metalloprotease	46.2	80.7	36.6
MGA_1885	LOCUS_18790	sequence1:2227187..2228035(+)	partial			WP_012804994.1	PrsW family intramembrane metalloprotease	83.0	56.1	26.8
MGA_1886	LOCUS_18800	sequence1:2228032..2228559(+)	partial			WP_011728704.1	NUDIX domain-containing protein	81.7	42.7	38.7
MGA_1893	LOCUS_18870	sequence1:2233235..2234194(+)	partial			WP_086841829.1	SPFH domain-containing protein	90.9	61.2	55.9
MGA_1897	LOCUS_18910	sequence1:2239377..2240762(+)	partial			WP_005112672.1	hypothetical protein	72.0	73.5	30.1
MGA_1898	LOCUS_18920	sequence1:2240813..2246299(+)	partial			WP_012502785.1	tetratricopeptide repeat protein	21.4	55.6	28.8
MGA_1912	LOCUS_19060	sequence1:2258515..2259849(+)	partial			WP_012805005.1	DUF349 domain-containing protein	91.0	67.8	41.1
MGA_1934	LOCUS_19280	sequence1:2287383..2288075(+)	partial			WP_010886586.1	A24 family peptidase	70.4	63.7	29.6
MGA_1943	LOCUS_19370	sequence1:2296647..2297012(-)	partial			WP_013097630.1	proofreading thioesterase EntH	83.5	70.8	34.3
MGA_1947	LOCUS_19410	sequence1:2303279..2303977(+)	partial			WP_034286284.1	dephospho-CoA kinase	75.0	43.7	49.7
MGA_1973	LOCUS_19670	sequence1:2337805..2338677(+)	partial			WP_030868147.1	segregation/condensation protein A	87.9	59.8	53.1
MGA_1974	LOCUS_19680	sequence1:2338670..2339230(+)	partial			WP_011027964.1	SMC-Scp complex subunit ScpB	86.6	70.9	55.6
MGA_1977	LOCUS_19710	sequence1:2341201..2341932(+)	partial			WP_012805133.1	bifunctional cytidylate kinase/GTPase Der	91.4	29.4	52.7
MGA_1992	LOCUS_19860	sequence1:2357272..2357958(-)	partial			WP_011028214.1	phosphatase PAP2 family protein	84.2	67.6	36.4
MGA_2004	LOCUS_19980	sequence1:2370908..2372500(-)	partial			WP_011027807.1	primosomal protein N'	96.0	73.3	37.3
MGA_2009	LOCUS_20030	sequence1:2375980..2376246(-)	partial			WP_012805083.1	DNA-directed RNA polymerase subunit omega	93.2	68.3	62.2
MGA_2020	LOCUS_20140	sequence1:2387490..2387699(-)	frameshift		2387773	WP_010989591.1	hexose phosphate transporter Hpt	81.2	12.1	46.4
MGA_2021	LOCUS_20150	sequence1:2387648..2388904(-)	frameshift		2387764	WP_001008722.1	hexose-6-phosphate:phosphate antiporter	89.5	81.5	48.9
MGA_2028	LOCUS_20220	sequence1:2393586..2394545(-)	partial			WP_003819348.1	transcription antitermination factor NusB	42.3	58.3	40.0
MGA_2032	LOCUS_20260	sequence1:2396733..2397242(-)	partial			WP_011728767.1	shikimate kinase	95.3	66.8	52.8
MGA_2048	LOCUS_20420	sequence1:2411081..2411422(+)	partial			WP_012027441.1	HAD family hydrolase	85.0	44.4	40.4
MGA_2060	LOCUS_20540	sequence1:2426201..2427550(-)	partial			WP_194949580.1	hypothetical protein	33.0	23.3	27.1
MGA_2087	LOCUS_20810	sequence1:2452863..2454776(-)	partial			WP_011027978.1	HAD hydrolase-like protein	44.0	81.9	46.6