{
    "type": "genome",
    "identifier": "GCF_031316635.1",
    "organism": "Bacillus mojavensis",
    "title": "Bacillus mojavensis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "American Type Culture Collection (ATCC)",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_031316635.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN12236522",
        "wgs_master": "VKPU00000000.1",
        "refseq_category": "na",
        "taxid": "72360",
        "species_taxid": "72360",
        "organism_name": "Bacillus mojavensis",
        "infraspecific_name": "strain=ATCC 51516",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/09/08",
        "asm_name": "ASM3131663v1",
        "asm_submitter": "American Type Culture Collection (ATCC)",
        "gbrs_paired_asm": "GCA_031316635.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/031/316/635/GCF_031316635.1_ASM3131663v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3960522",
        "genome_size_ungapped": "3960522",
        "gc_percent": "43.500000",
        "replicon_count": "0",
        "scaffold_count": "84",
        "contig_count": "84",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_031316635.1-RS_2024_08_03",
        "annotation_date": "2024-08-03",
        "total_gene_count": "4153",
        "protein_coding_gene_count": "3919",
        "non_coding_gene_count": "78",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-09-08",
    "dateModified": "2023-09-08",
    "datePublished": "2023-09-08",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacillus mojavensis"
        ],
        "sample_taxid": [
            "72360"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Missing"
        ],
        "sample_host_location_id": [],
        "data_size": "1.126 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3960522",
        "Number of Sequences": "84",
        "Longest Sequences (bp)": "1088222",
        "N50 (bp)": "894255",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "43.7",
        "Number of CDSs": "3976",
        "Average Protein Length": "288.7",
        "Coding Ratio (%)": "86.9",
        "Number of rRNAs": "2",
        "Number of tRNAs": "69",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "relation_to_type": "type",
                "validated": true,
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                "status": "inconclusive"
            },
            {
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            },
            {
                "organism_name": "Bacillus halotolerans",
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                "species_taxid": 260554,
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                "ani": 95.4866,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Bacillus halotolerans",
                "strain": "strain=FJAT-2398",
                "accession": "GCA_001637525.1",
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                "ani": 95.4633,
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                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Bacillus subtilis subsp. subtilis",
                "strain": "strain=168",
                "accession": "GCA_024917115.1",
                "taxid": 135461,
                "species_taxid": 1423,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 1147,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "accession": "GCA_900445435.1",
                "taxid": 227866,
                "species_taxid": 227866,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 962,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus vallismortis",
                "strain": "strain=DV1-F-3",
                "accession": "GCA_000245315.1",
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                "species_taxid": 72361,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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            {
                "accession": "GCF_000245335.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus",
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                "num_clustered_genomes": 4,
                "status": "inconclusive"
            },
            {
                "accession": "GCF_001517105.1",
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            },
            {
                "accession": "GCA_000332645.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus",
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                "status": "-"
            },
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                "accession": "GCF_000227465.1",
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                "accession": "GCF_004124315.1",
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        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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        "mojavensis"
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    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}