{ "type": "genome", "identifier": "GCF_032598785.1", "organism": "Terrisporobacter petrolearius", "title": "Terrisporobacter petrolearius", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Georg-August-University Goettingen", "publication": [ {} ], "properties": { "assembly_accession": "GCF_032598785.1", "bioproject": "PRJNA224116", "biosample": "SAMN28513175", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "1460447", "species_taxid": "1460447", "organism_name": "Terrisporobacter petrolearius", "infraspecific_name": "strain=JCM 19845", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/10/12", "asm_name": "ASM3259878v1", "asm_submitter": "Georg-August-University Goettingen", "gbrs_paired_asm": "GCA_032598785.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/032/598/785/GCF_032598785.1_ASM3259878v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4124338", "genome_size_ungapped": "4124338", "gc_percent": "29.000000", "replicon_count": "3", "scaffold_count": "3", "contig_count": "3", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2024-02-29", "total_gene_count": "4078", "protein_coding_gene_count": "3903", "non_coding_gene_count": "133", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-10-12", "dateModified": "2023-10-12", "datePublished": "2023-10-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Terrisporobacter petrolearius" ], "sample_taxid": [ "1460447" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Shengli oilfied" ], "sample_host_location_id": [], "data_size": "1.111 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4124338", "Number of Sequences": "3", "Longest Sequences (bp)": "4096312", "N50 (bp)": "4096312", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "28.9", "Number of CDSs": "3986", "Average Protein Length": "290.4", "Coding Ratio (%)": "84.2", "Number of rRNAs": "36", "Number of tRNAs": "93", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Terrisporobacter petrolearius", "strain": "strain=LAM0A37", "accession": "GCA_020748185.1", 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"min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.262, "cell_length": 0.278, "doubling_h": 0.698, "growth_tmp": 34.166, "optimum_tmp": 33.5, "optimum_ph": null, "genome_size": 4003781.667, "gc_content": null, "coding_genes": null, "rRNA16S_genes": null, "tRNA_genes": null, "gram_stain": 1.0, "sporulation": 1.0, "motility": 1.0, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 1.0, "aerobic_respiration": 0.0, "mesophilic_range_tmp": null, "thermophilic_range_tmp": null, "psychrophilic_range_tmp": null, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Terrisporobacter", "petrolearius" ], "quality": 5, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }