{
    "type": "genome",
    "identifier": "GCF_900011295.1",
    "organism": "Acinetobacter baumannii",
    "title": "Acinetobacter baumannii",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "LSHTM",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_900011295.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMEA3650403",
        "wgs_master": "CZWC00000000.1",
        "refseq_category": "na",
        "taxid": "470",
        "species_taxid": "470",
        "organism_name": "Acinetobacter baumannii",
        "infraspecific_name": "na",
        "isolate": "ATCC19606",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2016/04/11",
        "asm_name": "ATCC19606 assembly",
        "asm_submitter": "LSHTM",
        "gbrs_paired_asm": "GCA_900011295.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/011/295/GCF_900011295.1_ATCC19606_assembly",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3974239",
        "genome_size_ungapped": "3974239",
        "gc_percent": "39.000000",
        "replicon_count": "0",
        "scaffold_count": "114",
        "contig_count": "114",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_900011295.1-RS_2024_05_21",
        "annotation_date": "2024-05-21",
        "total_gene_count": "3950",
        "protein_coding_gene_count": "3685",
        "non_coding_gene_count": "74",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2016-04-11",
    "dateModified": "2016-04-11",
    "datePublished": "2016-04-11",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Acinetobacter baumannii"
        ],
        "sample_taxid": [
            "470"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [
            "diseased"
        ],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Netherlands"
        ],
        "sample_host_location_id": [],
        "data_size": "1.125 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.46,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3974239",
        "Number of Sequences": "114",
        "Longest Sequences (bp)": "215571",
        "N50 (bp)": "55960",
        "Gap Ratio (%)": "0.000050",
        "GCcontent (%)": "39.1",
        "Number of CDSs": "3724",
        "Average Protein Length": "305.5",
        "Coding Ratio (%)": "85.9",
        "Number of rRNAs": "3",
        "Number of tRNAs": "63",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Acinetobacter baumannii",
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                "species_taxid": 470,
                "relation_to_type": "type",
                "validated": true,
                "ani": 99.8628,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Acinetobacter baumannii",
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                "accession": "GCA_009035845.1",
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                "validated": true,
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                "matched_fragments": 1250,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Acinetobacter baumannii",
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                "ani": 99.8465,
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                "status": "conclusive"
            },
            {
                "organism_name": "Acinetobacter baumannii",
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                "status": "conclusive"
            },
            {
                "organism_name": "Acinetobacter baumannii",
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                "ani": 99.841,
                "matched_fragments": 1252,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Acinetobacter pittii",
                "strain": "strain=CIP70.29",
                "accession": "GCA_024390955.1",
                "taxid": 48296,
                "species_taxid": 48296,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 1016,
                "total_fragments": 1273,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acinetobacter junii",
                "strain": "strain=NCTC10307",
                "accession": "GCA_900444875.1",
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                "species_taxid": 40215,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.5396,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acinetobacter pecorum",
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                "accession": "GCA_014837015.1",
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                "ani": 78.7209,
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                "status": "below_threshold"
            }
        ],
        "cc_result": {
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                "accession": "GCF_009759685.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter",
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            },
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                "num_clustered_genomes": 250,
                "status": "-"
            },
            {
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            },
            {
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        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}