{
    "type": "genome",
    "identifier": "GCF_900048895.1",
    "organism": "Neglectibacter timonensis",
    "title": "Neglectibacter timonensis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "URMITE",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_900048895.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMEA3869492",
        "wgs_master": "FIZH00000000.1",
        "refseq_category": "reference genome",
        "taxid": "1776382",
        "species_taxid": "1776382",
        "organism_name": "Neglectibacter timonensis",
        "infraspecific_name": "strain=SN17",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2016/02/19",
        "asm_name": "PRJEB12697",
        "asm_submitter": "URMITE",
        "gbrs_paired_asm": "GCA_900048895.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/048/895/GCF_900048895.1_PRJEB12697",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3671597",
        "genome_size_ungapped": "3671396",
        "gc_percent": "53.000000",
        "replicon_count": "0",
        "scaffold_count": "14",
        "contig_count": "15",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_900048895.1-RS_2024_04_12",
        "annotation_date": "2024-04-12",
        "total_gene_count": "3273",
        "protein_coding_gene_count": "3184",
        "non_coding_gene_count": "68",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2016-02-19",
    "dateModified": "2016-02-19",
    "datePublished": "2016-02-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Neglectibacter timonensis"
        ],
        "sample_taxid": [
            "1776382"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "1.039 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3671597",
        "Number of Sequences": "14",
        "Longest Sequences (bp)": "1671864",
        "N50 (bp)": "853189",
        "Gap Ratio (%)": "0.005583",
        "GCcontent (%)": "52.8",
        "Number of CDSs": "3291",
        "Average Protein Length": "322.6",
        "Coding Ratio (%)": "86.8",
        "Number of rRNAs": "11",
        "Number of tRNAs": "54",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
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                "organism_name": "Neglectibacter timonensis",
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                "accession": "GCA_900048895.1",
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 1215,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Fournierella massiliensis",
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                "accession": "GCA_004345265.1",
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                "species_taxid": 1650663,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.9308,
                "matched_fragments": 65,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Flavonifractor plautii",
                "strain": "strain=JCM 32125",
                "accession": "GCA_010508875.1",
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                "species_taxid": 292800,
                "relation_to_type": "suspected-type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
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        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Fournierella",
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                "num_clustered_genomes": 3,
                "status": "-"
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}