{ "type": "genome", "identifier": "GCF_900078675.2", "organism": "Mycobacterium interjectum", "title": "Mycobacterium interjectum", "description": "na", "data type": "Genome sequencing and assembly", "organization": "URMITE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900078675.2", "bioproject": "PRJNA224116", "biosample": "SAMEA3913390", "wgs_master": "FJVQ00000000.1", "refseq_category": "reference genome", "taxid": "33895", "species_taxid": "33895", "organism_name": "Mycobacterium interjectum", "infraspecific_name": "strain=ATCC 51457T", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/04/02", "asm_name": "PRJEB13236", "asm_submitter": "URMITE", "gbrs_paired_asm": "GCA_900078675.2", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/078/675/GCF_900078675.2_PRJEB13236", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5929237", "genome_size_ungapped": "5847908", "gc_percent": "68.000000", "replicon_count": "0", "scaffold_count": "30", "contig_count": "221", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900078675.2-RS_2024_12_11", "annotation_date": "2024-12-11", "total_gene_count": "6033", "protein_coding_gene_count": "5238", "non_coding_gene_count": "54", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-04-02", "dateModified": "2016-04-02", "datePublished": "2016-04-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Mycobacterium interjectum" ], "sample_taxid": [ "33895" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], 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"status": "below_threshold" }, { "organism_name": "Mycobacterium heidelbergense", "strain": "strain=DSM 44471", "accession": "GCA_002086215.1", "taxid": 53376, "species_taxid": 53376, "relation_to_type": "type", "validated": true, "ani": 86.0632, "matched_fragments": 1199, "total_fragments": 1963, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium heidelbergense", "strain": "strain=JCM 14842", "accession": "GCA_010730745.1", "taxid": 53376, "species_taxid": 53376, "relation_to_type": "type", "validated": true, "ani": 85.9867, "matched_fragments": 1237, "total_fragments": 1963, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium palustre", "strain": "strain=DSM 44572", "accession": "GCA_002101785.1", "taxid": 153971, "species_taxid": 153971, "relation_to_type": "type", "validated": true, "ani": 85.2683, "matched_fragments": 1285, "total_fragments": 1963, "ani_threshold": 95, "status": "below_threshold" }, { 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