{ "type": "genome", "identifier": "GCF_900090325.1", "organism": "Micromonospora pallida", "title": "Micromonospora pallida", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE - JOINT GENOME INSTITUTE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900090325.1", "bioproject": "PRJNA224116", "biosample": "SAMN04489814", "wgs_master": "FMHW00000000.1", "refseq_category": "reference genome", "taxid": "145854", "species_taxid": "145854", "organism_name": "Micromonospora pallida", "infraspecific_name": "strain=DSM 43817", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/08/25", "asm_name": "IMG-taxon 2636415968 annotated assembly", "asm_submitter": "DOE - JOINT GENOME INSTITUTE", "gbrs_paired_asm": "GCA_900090325.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/090/325/GCF_900090325.1_IMG-taxon_2636415968_annotated_assembly", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7762826", "genome_size_ungapped": "7762826", "gc_percent": "72.000000", "replicon_count": "0", "scaffold_count": "4", "contig_count": "4", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900090325.1-RS_2024_05_02", "annotation_date": "2024-05-02", "total_gene_count": "6848", "protein_coding_gene_count": "6534", "non_coding_gene_count": "99", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-08-25", "dateModified": "2016-08-25", "datePublished": "2016-08-25", "_annotation": { "sample_count": 1, "sample_organism": [ "Micromonospora pallida" ], "sample_taxid": [ "145854" ], 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2585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora acroterricola", "strain": "strain=5R2A7", "accession": "GCA_003172955.1", "taxid": 2202421, "species_taxid": 2202421, "relation_to_type": "type", "validated": true, "ani": 83.3549, "matched_fragments": 1175, "total_fragments": 2585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora rifamycinica", "strain": "strain=DSM 44983", "accession": "GCA_900090265.1", "taxid": 291594, "species_taxid": 291594, "relation_to_type": "type", "validated": true, "ani": 83.2765, "matched_fragments": 1347, "total_fragments": 2585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora rifamycinica", "strain": "strain=AM105", "accession": "GCA_001542325.1", "taxid": 291594, "species_taxid": 291594, "relation_to_type": "type", "validated": true, "ani": 83.2696, "matched_fragments": 1227, "total_fragments": 2585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora humida", "strain": "strain=MMS20-R1-14", "accession": "GCA_016901255.1", "taxid": 2809018, "species_taxid": 2809018, "relation_to_type": "type", "validated": true, "ani": 83.2641, "matched_fragments": 1350, "total_fragments": 2585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora ferruginea", "strain": "strain=28ISP2-46", "accession": "GCA_013694245.1", "taxid": 2749844, "species_taxid": 2749844, "relation_to_type": "type", "validated": true, "ani": 83.1679, "matched_fragments": 1377, "total_fragments": 2585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora costi", "strain": "strain=CS1-12", "accession": "GCA_003626655.1", "taxid": 1530042, "species_taxid": 1530042, "relation_to_type": "type", "validated": true, "ani": 82.9634, "matched_fragments": 1335, "total_fragments": 2585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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