{ "type": "genome", "identifier": "GCF_900100945.1", "organism": "Mucilaginibacter gossypii", "title": "Mucilaginibacter gossypii", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE - JOINT GENOME INSTITUTE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900100945.1", "bioproject": "PRJNA224116", "biosample": "SAMN05192573", "wgs_master": "FNCG00000000.1", "refseq_category": "na", "taxid": "551996", "species_taxid": "551996", "organism_name": "Mucilaginibacter gossypii", "infraspecific_name": "strain=Gh-67", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/10/21", "asm_name": "IMG-taxon 2651870011 annotated assembly", "asm_submitter": "DOE - JOINT GENOME INSTITUTE", "gbrs_paired_asm": "GCA_900100945.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/100/945/GCF_900100945.1_IMG-taxon_2651870011_annotated_assembly", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7109178", "genome_size_ungapped": "7106653", "gc_percent": "43.000000", "replicon_count": "0", "scaffold_count": "45", "contig_count": "45", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2023-08-11", "total_gene_count": "6057", "protein_coding_gene_count": "5976", "non_coding_gene_count": "57", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-10-21", "dateModified": "2016-10-21", "datePublished": "2016-10-21", "_annotation": { "sample_count": 1, "sample_organism": [ "Mucilaginibacter gossypii" ], "sample_taxid": [ "551996" 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"total_fragments": 2349, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_900100945.1", "gtdb_species": "s__Mucilaginibacter gossypii", "ani": 100.0, "matched_fragments": 2344, "total_fragments": 2349, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Mucilaginibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.19", "min_intra_species_ani": "95.83", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.84", "num_clustered_genomes": 10, "status": "conclusive" }, { "accession": "GCF_014643835.1", "gtdb_species": "s__Mucilaginibacter rubeus", "ani": 94.4394, "matched_fragments": 1870, "total_fragments": 2349, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Mucilaginibacter", "ani_circumscription_radius": 95.0, 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