{ "type": "genome", "identifier": "GCF_900102165.1", "organism": "Cellulophaga baltica", "title": "Cellulophaga baltica", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE - JOINT GENOME INSTITUTE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900102165.1", "bioproject": "PRJNA224116", "biosample": "SAMN04487992", "wgs_master": "FNBD00000000.1", "refseq_category": "na", "taxid": "76594", "species_taxid": "76594", "organism_name": "Cellulophaga baltica", "infraspecific_name": "strain=DSM 24729", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/10/21", "asm_name": "IMG-taxon 2622736528 annotated assembly", "asm_submitter": "DOE - JOINT GENOME INSTITUTE", "gbrs_paired_asm": "GCA_900102165.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/102/165/GCF_900102165.1_IMG-taxon_2622736528_annotated_assembly", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4718566", "genome_size_ungapped": "4711421", "gc_percent": "34.500000", "replicon_count": "0", "scaffold_count": "59", "contig_count": "59", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900102165.1-RS_2024_07_25", "annotation_date": "2024-07-25", "total_gene_count": "4205", "protein_coding_gene_count": "4130", "non_coding_gene_count": "48", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-10-21", "dateModified": "2016-10-21", "datePublished": "2016-10-21", "_annotation": { "sample_count": 1, "sample_organism": [ "Cellulophaga baltica" ], "sample_taxid": [ "76594" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "missing" ], "sample_host_location_id": [], "data_size": "1.322 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4718566", "Number of Sequences": "59", "Longest Sequences (bp)": "735892", "N50 (bp)": "357594", "Gap Ratio (%)": "0.151423", "GCcontent (%)": "34.5", "Number of CDSs": "4092", "Average Protein Length": "339.8", "Coding Ratio (%)": "88.4", "Number of rRNAs": "6", "Number of tRNAs": "37", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Cellulophaga baltica", "strain": "strain=DSM 24729", "accession": "GCA_900102165.1", "taxid": 76594, "species_taxid": 76594, 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter stanieri", "strain": "strain=DSM 19891", "accession": "GCA_900112245.1", "taxid": 440514, "species_taxid": 440514, "relation_to_type": "type", "validated": true, "ani": 77.4236, "matched_fragments": 277, "total_fragments": 1546, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter forsetii", "strain": "strain=DSM 18668", "accession": "GCA_000744105.1", "taxid": 444515, "species_taxid": 444515, "relation_to_type": "type", "validated": true, "ani": 77.301, "matched_fragments": 290, "total_fragments": 1546, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter vaceletii", "strain": "strain=DSM 25230", "accession": "GCA_003634105.1", "taxid": 1206816, "species_taxid": 1206816, "relation_to_type": "type", "validated": true, "ani": 77.1798, "matched_fragments": 349, "total_fragments": 1546, "ani_threshold": 95, "status": "below_threshold" }, { 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