{
    "type": "genome",
    "identifier": "GCF_900102835.1",
    "organism": "Sphingobacterium mizutaii",
    "title": "Sphingobacterium mizutaii",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE - JOINT GENOME INSTITUTE",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_900102835.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN05192578",
        "wgs_master": "FNGK00000000.1",
        "refseq_category": "na",
        "taxid": "1010",
        "species_taxid": "1010",
        "organism_name": "Sphingobacterium mizutaii",
        "infraspecific_name": "strain=DSM 11724",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2016/10/21",
        "asm_name": "IMG-taxon 2634166301 annotated assembly",
        "asm_submitter": "DOE - JOINT GENOME INSTITUTE",
        "gbrs_paired_asm": "GCA_900102835.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/102/835/GCF_900102835.1_IMG-taxon_2634166301_annotated_assembly",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4629350",
        "genome_size_ungapped": "4628215",
        "gc_percent": "39.500000",
        "replicon_count": "0",
        "scaffold_count": "24",
        "contig_count": "24",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_900102835.1-RS_2024_10_23",
        "annotation_date": "2024-10-23",
        "total_gene_count": "3988",
        "protein_coding_gene_count": "3906",
        "non_coding_gene_count": "59",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2016-10-21",
    "dateModified": "2016-10-21",
    "datePublished": "2016-10-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Sphingobacterium mizutaii"
        ],
        "sample_taxid": [
            "1010"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "missing"
        ],
        "sample_host_location_id": [],
        "data_size": "1.313 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4629350",
        "Number of Sequences": "24",
        "Longest Sequences (bp)": "1787566",
        "N50 (bp)": "530522",
        "Gap Ratio (%)": "0.024517",
        "GCcontent (%)": "39.7",
        "Number of CDSs": "3848",
        "Average Protein Length": "342.8",
        "Coding Ratio (%)": "85.5",
        "Number of rRNAs": "4",
        "Number of tRNAs": "47",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Sphingobacterium mizutaii",
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                "species_taxid": 1010,
                "relation_to_type": "type",
                "validated": true,
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            },
            {
                "organism_name": "Sphingobacterium mizutaii",
                "strain": "strain=NCTC12149",
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                "species_taxid": 1010,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Sphingobacterium mizutaii",
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                "accession": "GCA_007990895.1",
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            },
            {
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                "species_taxid": 1914757,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingobacterium soli",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingobacterium corticibacterium",
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                "accession": "GCA_004208525.1",
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                "species_taxid": 2484746,
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                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingobacterium prati",
                "strain": "strain=arapr2",
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                "species_taxid": 2737006,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pedobacter ghigonis",
                "strain": "strain=Marseille-Q2390",
                "accession": "GCA_903166585.1",
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                "species_taxid": 2730403,
                "relation_to_type": "type",
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                "matched_fragments": 55,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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                "accession": "GCF_900187125.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium",
                "ani_circumscription_radius": 95.0,
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                "num_clustered_genomes": 4,
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                "mean_intra_species_ani": "98.27",
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                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_002245855.1",
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            },
            {
                "accession": "GCF_901472535.1",
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        ]
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    "_bac2feature": {
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        "bacillus_cell_shape": 1.0,
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        "mizutaii"
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}