{
    "type": "genome",
    "identifier": "GCF_900102965.1",
    "organism": "Paenibacillus jilunlii",
    "title": "Paenibacillus jilunlii",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE - JOINT GENOME INSTITUTE",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_900102965.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN05216191",
        "wgs_master": "FNGM00000000.1",
        "refseq_category": "na",
        "taxid": "682956",
        "species_taxid": "682956",
        "organism_name": "Paenibacillus jilunlii",
        "infraspecific_name": "strain=CGMCC 1.10239",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2016/10/21",
        "asm_name": "IMG-taxon 2667527409 annotated assembly",
        "asm_submitter": "DOE - JOINT GENOME INSTITUTE",
        "gbrs_paired_asm": "GCA_900102965.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/102/965/GCF_900102965.1_IMG-taxon_2667527409_annotated_assembly",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "7032114",
        "genome_size_ungapped": "7018251",
        "gc_percent": "51.000000",
        "replicon_count": "0",
        "scaffold_count": "39",
        "contig_count": "39",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_900102965.1-RS_2024_04_24",
        "annotation_date": "2024-04-24",
        "total_gene_count": "6175",
        "protein_coding_gene_count": "6002",
        "non_coding_gene_count": "102",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2016-10-21",
    "dateModified": "2016-10-21",
    "datePublished": "2016-10-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Paenibacillus jilunlii"
        ],
        "sample_taxid": [
            "682956"
        ],
        "sample_host_organism": [
            "not applicable"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "missing"
        ],
        "sample_host_location_id": [],
        "data_size": "2.000 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 8.33,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "7032114",
        "Number of Sequences": "39",
        "Longest Sequences (bp)": "1034159",
        "N50 (bp)": "273361",
        "Gap Ratio (%)": "0.197138",
        "GCcontent (%)": "50.8",
        "Number of CDSs": "6149",
        "Average Protein Length": "324.5",
        "Coding Ratio (%)": "85.1",
        "Number of rRNAs": "5",
        "Number of tRNAs": "78",
        "Number of CRISPRs": "3"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "status": "conclusive"
            },
            {
                "organism_name": "Paenibacillus jilunlii",
                "strain": "strain=DSM 23019",
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                "species_taxid": 682956,
                "relation_to_type": "type",
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            {
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                "ani_threshold": 95,
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            },
            {
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                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
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            {
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                "species_taxid": 189425,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus sonchi",
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                "accession": "GCA_000316285.1",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus graminis",
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                "status": "below_threshold"
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            {
                "organism_name": "Paenibacillus riograndensis",
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            {
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                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus tianjinensis",
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            {
                "organism_name": "Paenibacillus piscarius",
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            },
            {
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                "taxid": 189426,
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                "ani": 79.3534,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus agri",
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            {
                "organism_name": "Paenibacillus rhizophilus",
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                "organism_name": "Paenibacillus macerans",
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            {
                "organism_name": "Saccharibacillus alkalitolerans",
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                "mean_intra_species_ani": "N/A",
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}