{ "type": "genome", "identifier": "GCF_900107415.1", "organism": "Jannaschia faecimaris", "title": "Jannaschia faecimaris", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE - JOINT GENOME INSTITUTE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900107415.1", "bioproject": "PRJNA224116", "biosample": "SAMN05444004", "wgs_master": "FNPX00000000.1", "refseq_category": "reference genome", "taxid": "1244108", "species_taxid": "1244108", "organism_name": "Jannaschia faecimaris", "infraspecific_name": "strain=DSM 100420", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/10/22", "asm_name": "IMG-taxon 2693429889 annotated assembly", "asm_submitter": "DOE - JOINT GENOME INSTITUTE", "gbrs_paired_asm": "GCA_900107415.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/107/415/GCF_900107415.1_IMG-taxon_2693429889_annotated_assembly", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3810757", "genome_size_ungapped": "3810757", "gc_percent": "62.000000", "replicon_count": "0", "scaffold_count": "48", "contig_count": "48", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900107415.1-RS_2024_04_24", "annotation_date": "2024-04-24", "total_gene_count": "3862", "protein_coding_gene_count": "3721", "non_coding_gene_count": "50", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-10-22", "dateModified": "2016-10-22", "datePublished": "2016-10-22", "_annotation": { "sample_count": 1, "sample_organism": [ "Jannaschia faecimaris" ], "sample_taxid": [ "1244108" ], 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"status": "below_threshold" }, { "organism_name": "Palleronia rufa", "strain": "strain=MOLA 401", "accession": "GCA_000743715.1", "taxid": 1530186, "species_taxid": 1530186, "relation_to_type": "type", "validated": true, "ani": 76.8853, "matched_fragments": 213, "total_fragments": 1247, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salipiger pallidus", "strain": "strain=CGMCC 1.15762", "accession": "GCA_014643635.1", "taxid": 1775170, "species_taxid": 1775170, "relation_to_type": "type", "validated": true, "ani": 76.8147, "matched_fragments": 199, "total_fragments": 1247, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhabdonatronobacter sediminivivens", "strain": "strain=IM2376", "accession": "GCA_013415485.1", "taxid": 2743469, "species_taxid": 2743469, "relation_to_type": "type", "validated": true, "ani": 76.7556, "matched_fragments": 184, "total_fragments": 1247, "ani_threshold": 95, "status": "below_threshold" }, { 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