{ "type": "genome", "identifier": "GCF_900109245.1", "organism": "Demequina mangrovi", "title": "Demequina mangrovi", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE - JOINT GENOME INSTITUTE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900109245.1", "bioproject": "PRJNA224116", "biosample": "SAMN05421637", "wgs_master": "FNZI00000000.1", "refseq_category": "reference genome", "taxid": "1043493", "species_taxid": "1043493", "organism_name": "Demequina mangrovi", "infraspecific_name": "strain=DSM 24868", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/10/31", "asm_name": "IMG-taxon 2687453759 annotated assembly", "asm_submitter": "DOE - JOINT GENOME INSTITUTE", "gbrs_paired_asm": "GCA_900109245.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/109/245/GCF_900109245.1_IMG-taxon_2687453759_annotated_assembly", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2973201", "genome_size_ungapped": "2973201", "gc_percent": "72.000000", "replicon_count": "0", "scaffold_count": "15", "contig_count": "15", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900109245.1-RS_2024_04_26", "annotation_date": "2024-04-26", "total_gene_count": "2798", "protein_coding_gene_count": "2738", "non_coding_gene_count": "52", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-10-31", "dateModified": "2016-10-31", "datePublished": "2016-10-31", "_annotation": { "sample_count": 1, "sample_organism": [ "Demequina mangrovi" ], "sample_taxid": [ "1043493" ], "sample_host_organism": 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"below_threshold" }, { "organism_name": "Cellulomonas fulva", "strain": "strain=DKR-3", "accession": "GCA_018531375.1", "taxid": 2835530, "species_taxid": 2835530, "relation_to_type": "type", "validated": true, "ani": 77.9809, "matched_fragments": 387, "total_fragments": 985, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oerskovia douganii", "strain": "strain=Sa1BUA8", "accession": "GCA_015142735.1", "taxid": 2762210, "species_taxid": 2762210, "relation_to_type": "type", "validated": true, "ani": 77.9535, "matched_fragments": 353, "total_fragments": 985, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter sedimenti", "strain": "strain=MIC A30", "accession": "GCA_011750795.2", "taxid": 2694931, "species_taxid": 2694931, "relation_to_type": "type", "validated": true, "ani": 77.3424, "matched_fragments": 170, "total_fragments": 985, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, 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