{ "type": "genome", "identifier": "GCF_900110105.1", "organism": "Mucilaginibacter gossypiicola", "title": "Mucilaginibacter gossypiicola", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE - JOINT GENOME INSTITUTE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900110105.1", "bioproject": "PRJNA224116", "biosample": "SAMN05192574", "wgs_master": "FOCL00000000.1", "refseq_category": "reference genome", "taxid": "551995", "species_taxid": "551995", "organism_name": "Mucilaginibacter gossypiicola", "infraspecific_name": "strain=Gh-48", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/10/31", "asm_name": "IMG-taxon 2651870109 annotated assembly", "asm_submitter": "DOE - JOINT GENOME INSTITUTE", "gbrs_paired_asm": "GCA_900110105.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/110/105/GCF_900110105.1_IMG-taxon_2651870109_annotated_assembly", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "8225572", "genome_size_ungapped": "8224779", "gc_percent": "42.500000", "replicon_count": "0", "scaffold_count": "28", "contig_count": "28", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900110105.1-RS_2024_10_22", "annotation_date": "2024-10-22", "total_gene_count": "6796", "protein_coding_gene_count": "6719", "non_coding_gene_count": "64", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-10-31", "dateModified": "2016-10-31", "datePublished": "2016-10-31", "_annotation": { "sample_count": 1, "sample_organism": [ "Mucilaginibacter gossypiicola" ], "sample_taxid": [ "551995" ], 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2729, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_900110105.1", "gtdb_species": "s__Mucilaginibacter gossypiicola", "ani": 100.0, "matched_fragments": 2727, "total_fragments": 2729, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Mucilaginibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_003208075.1", "gtdb_species": "s__Mucilaginibacter sp003208075", "ani": 87.6396, "matched_fragments": 1942, "total_fragments": 2729, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Mucilaginibacter", "ani_circumscription_radius": 95.0, 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