{ "type": "genome", "identifier": "GCF_900114535.1", "organism": "Methylobacterium pseudosasicola", "title": "Methylobacterium pseudosasicola", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE - JOINT GENOME INSTITUTE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900114535.1", "bioproject": "PRJNA224116", "biosample": "SAMN05192568", "wgs_master": "FOTK00000000.1", "refseq_category": "reference genome", "taxid": "582667", "species_taxid": "582667", "organism_name": "Methylobacterium pseudosasicola", "infraspecific_name": "strain=BL36", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/11/05", "asm_name": "IMG-taxon 2654588108 annotated assembly", "asm_submitter": "DOE - JOINT GENOME INSTITUTE", "gbrs_paired_asm": "GCA_900114535.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/114/535/GCF_900114535.1_IMG-taxon_2654588108_annotated_assembly", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6845277", "genome_size_ungapped": "6845257", "gc_percent": "68.500000", "replicon_count": "0", "scaffold_count": "129", "contig_count": "129", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900114535.1-RS_2024_04_24", "annotation_date": "2024-04-24", "total_gene_count": "6807", "protein_coding_gene_count": "6567", "non_coding_gene_count": "61", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-11-05", "dateModified": "2016-11-05", "datePublished": "2016-11-05", "_annotation": { "sample_count": 1, "sample_organism": [ "Methylobacterium pseudosasicola" ], "sample_taxid": [ "582667" ], 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"type", "validated": true, "ani": 86.007, "matched_fragments": 1431, "total_fragments": 2219, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium radiotolerans", "strain": "strain=JCM 2831", "accession": "GCA_000019725.1", "taxid": 31998, "species_taxid": 31998, "relation_to_type": "type", "validated": true, "ani": 85.9882, "matched_fragments": 1493, "total_fragments": 2219, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium phyllosphaerae", "strain": "strain=CBMB27", "accession": "GCA_001936175.1", "taxid": 418223, "species_taxid": 418223, "relation_to_type": "suspected-type", "validated": true, "ani": 85.702, "matched_fragments": 1434, "total_fragments": 2219, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium phyllosphaerae", "strain": "strain=CBMB27", "accession": "GCA_900113465.1", "taxid": 418223, "species_taxid": 418223, "relation_to_type": "suspected-type", 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2219, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium oropedii", "strain": "strain=Pear76", "accession": "GCA_020889685.1", "taxid": 1571201, "species_taxid": 1571201, "relation_to_type": "type", "validated": true, "ani": 76.9753, "matched_fragments": 437, "total_fragments": 2219, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium altum", "strain": "strain=Pear77", "accession": "GCA_020889705.1", "taxid": 1571202, "species_taxid": 1571202, "relation_to_type": "type", "validated": true, "ani": 76.9722, "matched_fragments": 438, "total_fragments": 2219, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_900114535.1", "gtdb_species": "s__Methylobacterium pseudosasicola", "ani": 100.0, "matched_fragments": 2215, "total_fragments": 2219, "gtdb_taxonomy": 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