# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_11	LOCUS_00050	sequence06:726..1166(+)	partial			WP_000949083.1	lateral flagellin LafA	97.3	52.0	38.6
MGA_15	LOCUS_00070	sequence07:531..1376(+)	partial			WP_001072672.1	KilA-N domain-containing protein	54.8	56.5	29.7
MGA_53	LOCUS_00450	sequence08:38982..39437(-)	frameshift,internal_stop_codon	39453..39455(-)	39558	WP_004667395.1	IS91 family transposase	80.1	31.5	42.6
MGA_89	LOCUS_00800	sequence08:75444..75776(-)	partial			WP_000760238.1	C69 family dipeptidase	50.9	11.5	53.6
MGA_92	LOCUS_00830	sequence08:77369..77680(-)	partial			WP_001067858.1	IS6-like element IS26 family transposase	93.2	41.0	88.5
MGA_94	LOCUS_00850	sequence08:79023..80846(+)	partial			WP_001011239.1	leucine-rich repeat domain-containing protein	27.8	45.1	42.4
MGA_95	LOCUS_00860	sequence08:80951..81127(+)	partial			WP_102800924.1	IS3 family transposase	62.1	9.8	80.6
MGA_98	LOCUS_00890	sequence08:83112..83432(-)	partial			WP_010973373.1	recombinase family protein	61.3	31.0	63.1
MGA_101	LOCUS_00920	sequence08:85678..86028(-)	internal_stop_codon	86044..86046(-)		WP_001026857.1	type 3 secretion system effector OspC1	89.7	22.1	47.1
MGA_102	LOCUS_00930	sequence08:86044..86622(-)	frameshift,internal_stop_codon	86044..86046(-)	86608	WP_001026857.1	type 3 secretion system effector OspC1	99.0	40.4	60.0
MGA_103	LOCUS_00940	sequence08:86531..87184(-)	frameshift		86608	WP_001026857.1	type 3 secretion system effector OspC1	72.4	33.0	41.4
MGA_115	LOCUS_01060	sequence08:98385..98792(+)	partial			WP_019213468.1	IS6 family transposase	72.6	42.4	70.4
MGA_123	LOCUS_01140	sequence08:104920..105495(-)	partial			WP_011816679.1	OmpA family protein	94.8	33.1	28.3
MGA_126	LOCUS_01170	sequence08:108535..109167(-)	partial			WP_005168519.1	fimbrial protein	66.7	41.9	51.4
MGA_131	LOCUS_01220	sequence08:116505..117053(+)	frameshift		117044	WP_019080952.1	fimbria/pilus periplasmic chaperone	98.9	72.2	53.9
MGA_183	LOCUS_01720	sequence10:41922..42176(+)	internal_stop_codon	41853..41855(+),41781..41783(+)		WP_175631671.1	vitamin B12 ABC transporter substrate-binding protein BtuF	73.8	21.6	53.2
MGA_187	LOCUS_01760	sequence10:45300..46280(+)	partial			WP_011144015.1	efflux RND transporter periplasmic adaptor subunit	98.5	73.2	35.1
MGA_227	LOCUS_02150	sequence10:99359..99574(+)	frameshift,internal_stop_codon	99572..99574(+)	99676	WP_000942660.1	RNA-guided endonuclease TnpB family protein	83.1	15.2	79.7
MGA_268	LOCUS_02560	sequence10:144155..144379(+)	internal_stop_codon	144377..144379(+)		WP_002210461.1	HTH-type transcriptional regulator SgrR	91.9	12.3	54.4
MGA_269	LOCUS_02570	sequence10:144392..144748(+)	internal_stop_codon	144377..144379(+)		WP_013095556.1	HTH-type transcriptional regulator SgrR	98.3	21.1	56.0
MGA_342	LOCUS_03300	sequence10:229782..230030(-)	partial			WP_005104580.1	DUF1435 domain-containing protein	92.7	66.1	48.7
MGA_354	LOCUS_03420	sequence10:244586..245320(-)	partial			WP_012067058.1	GntR family transcriptional regulator	55.3	56.0	27.7
MGA_368	LOCUS_03560	sequence10:260645..261097(-)	internal_stop_codon	260645..260647(-)		WP_011069604.1	fimbrial protein	100.0	70.8	48.0
MGA_376	LOCUS_03640	sequence10:269340..270164(+)	frameshift		270110	WP_003693486.1	tyrosine-type recombinase/integrase	89.4	68.2	28.3
MGA_378	LOCUS_03660	sequence10:270634..270933(+)	partial			WP_005767619.1	type II toxin-antitoxin system HicB family antitoxin	87.9	65.7	40.4
MGA_379	LOCUS_03670	sequence10:271059..271937(+)	partial			WP_010989660.1	glycosyltransferase	85.6	69.4	28.7
MGA_380	LOCUS_03680	sequence10:271959..272897(-)	partial			WP_000268883.1	prophage tail fiber N-terminal domain-containing protein	56.7	21.5	33.5
MGA_395	LOCUS_03830	sequence10:285452..285673(-)	partial			WP_005161370.1	phage holin family protein	67.1	84.5	55.1
MGA_396	LOCUS_03840	sequence10:285797..286489(-)	partial			WP_002359986.1	phage tail tip lysozyme	62.6	17.4	28.1
MGA_403	LOCUS_03910	sequence10:291206..292957(+)	partial			WP_010920215.1	cellulase family glycosylhydrolase	27.4	33.2	27.0
MGA_409	LOCUS_03970	sequence10:299308..301386(+)	partial			WP_010920215.1	cellulase family glycosylhydrolase	15.0	19.4	34.6
MGA_415	LOCUS_04030	sequence10:304394..305074(+)	frameshift,internal_stop_codon	304129..304131(+)	304200,304386	WP_002399687.1	DNA polymerase	92.5	33.1	33.0
MGA_429	LOCUS_04170	sequence10:320427..320744(-)	partial			WP_015704303.1	amino acid deaminase	100.0	25.9	62.9
MGA_436	LOCUS_04240	sequence10:328359..328895(-)	internal_stop_codon	328914..328916(-)		WP_013095026.1	methionine synthase	97.2	14.1	75.7
MGA_437	LOCUS_04250	sequence10:328914..331631(-)	internal_stop_codon	328914..328916(-)		WP_013095026.1	methionine synthase	100.0	73.0	82.9
MGA_447	LOCUS_04350	sequence11:4128..4802(+)	partial			WP_000250470.1	helix-turn-helix transcriptional regulator	78.6	73.2	37.5
MGA_455	LOCUS_04430	sequence11:11578..12351(+)	partial			WP_000993735.1	phage antirepressor Ant	41.2	50.0	68.8
MGA_457	LOCUS_04450	sequence11:12614..12916(+)	partial			WP_010714182.1	VRR-NUC domain-containing protein	78.0	72.6	48.7
MGA_491	LOCUS_04790	sequence12:42831..43208(+)	frameshift		42768,43191	WP_050298109.1	ROK family protein	89.6	32.8	40.2
MGA_546	LOCUS_05340	sequence12:109824..110318(-)	partial			WP_038420751.1	DNA utilization protein GntX	100.0	72.2	51.8
MGA_587	LOCUS_05750	sequence12:155046..155198(+)	frameshift,internal_stop_codon	155196..155198(+),155431..155433(+)	155312,155391	WP_015368105.1	taurine ABC transporter substrate-binding protein	98.0	15.3	63.3
MGA_625	LOCUS_06120	sequence13:14623..14937(+)	frameshift		14931	WP_000043871.1	hypothetical protein	99.0	46.8	60.6
MGA_626	LOCUS_06130	sequence13:14907..15269(+)	frameshift		14931	WP_000043871.1	hypothetical protein	96.7	49.5	40.7
MGA_636	LOCUS_06230	sequence13:26281..27711(-)	partial			WP_106726897.1	Ti-type conjugative transfer relaxase TraA	57.6	27.9	33.7
MGA_643	LOCUS_06300	sequence13:34660..35358(+)	partial			WP_086016636.1	IS3 family transposase	100.0	46.0	72.8
MGA_647	LOCUS_06340	sequence13:40550..41416(+)	partial			WP_042440170.1	hypothetical protein	46.2	76.9	28.1
MGA_655	LOCUS_06420	sequence13:51098..51580(-)	internal_stop_codon	51752..51754(-)		WP_007851503.1	tyrosine-type recombinase/integrase	96.2	38.6	70.8
MGA_656	LOCUS_06430	sequence13:51752..52282(-)	internal_stop_codon	51752..51754(-)		WP_001218900.1	tyrosine-type recombinase/integrase	99.4	44.4	55.4
MGA_657	LOCUS_06440	sequence13:53322..53633(+)	frameshift,internal_stop_codon	53631..53633(+)	53139,53206	WP_015365890.1	phosphohydrolase	98.1	43.7	64.4
MGA_696	LOCUS_06830	sequence13:89521..90045(+)	partial			WP_000497942.1	FTR1 family protein	94.8	59.8	74.5
MGA_697	LOCUS_06840	sequence13:90088..90504(+)	internal_stop_codon	90502..90504(+)		WP_013097185.1	iron uptake system protein EfeO	98.6	36.3	80.9
MGA_698	LOCUS_06850	sequence13:90623..91474(+)	internal_stop_codon	91472..91474(+)		WP_015704997.1	iron uptake transporter deferrochelatase/peroxidase subunit	95.1	62.5	71.7
MGA_699	LOCUS_06860	sequence13:91556..91795(+)	internal_stop_codon	91793..91795(+),91472..91474(+)		WP_013097184.1	iron uptake transporter deferrochelatase/peroxidase subunit	100.0	18.5	73.4
MGA_711	LOCUS_06970	sequence14:11940..12551(-)	partial			WP_011832024.1	TetR/AcrR family transcriptional regulator	96.1	57.7	28.9
MGA_714	LOCUS_07000	sequence14:15109..15441(+)	internal_stop_codon	15091..15093(+)		WP_001120833.1	UvrD-helicase domain-containing protein	84.5	19.1	51.5
MGA_728	LOCUS_07140	sequence14:28143..28352(+)	frameshift		28165	WP_013097683.1	helix-turn-helix transcriptional regulator	84.1	61.1	43.1
MGA_735	LOCUS_07210	sequence14:31694..32746(+)	frameshift		32629	WP_013097761.1	serine hydrolase	88.9	71.5	60.5
MGA_736	LOCUS_07220	sequence14:32770..32889(+)	frameshift		32629	WP_013097761.1	serine hydrolase	87.2	7.9	67.6
MGA_738	LOCUS_07240	sequence14:33663..34589(+)	partial			WP_015705899.1	S-type pyocin domain-containing protein	77.3	35.7	44.8
MGA_740	LOCUS_07260	sequence14:37984..38412(-)	partial			WP_172412315.1	recombinase family protein	93.7	64.1	38.8
MGA_742	LOCUS_07280	sequence14:40176..40406(-)	frameshift		40201,40534	WP_002211655.1	LuxR family transcriptional regulator	68.4	21.1	48.1
MGA_745	LOCUS_07310	sequence14:46147..46893(-)	partial			WP_000041976.1	small ribosomal subunit biogenesis GTPase RsgA	98.8	69.1	80.0
MGA_748	LOCUS_07340	sequence14:48532..49245(-)	frameshift		49283	WP_015704164.1	tRNA epoxyqueuosine(34) reductase QueG	99.6	62.3	77.1
MGA_749	LOCUS_07350	sequence14:49221..49673(-)	frameshift,internal_stop_codon	49284..49286(-)	49286	WP_001294211.1	tRNA epoxyqueuosine(34) reductase QueG	86.0	34.0	84.5
MGA_765	LOCUS_07510	sequence14:67061..67645(+)	frameshift		67531	WP_011815429.1	esterase	79.4	61.8	58.4
MGA_766	LOCUS_07520	sequence14:67566..67811(+)	frameshift		67531	WP_011815429.1	esterase	100.0	32.5	58.0
MGA_771	LOCUS_07570	sequence14:70032..70601(-)	partial			WP_002210158.1	OapA family protein	95.2	69.1	44.8
MGA_796	LOCUS_07820	sequence14:97465..97716(-)	frameshift		97775	WP_000825607.1	YfdX family protein	97.6	44.3	43.0
MGA_808	LOCUS_07940	sequence14:110346..110708(-)	frameshift,internal_stop_codon	110931..110933(-)	110779,110894	WP_011815470.1	ABC transporter ATP-binding protein	87.5	44.1	47.6
MGA_834	LOCUS_08200	sequence14:141120..141404(-)	partial			WP_000222100.1	ubiquinone biosynthesis accessory factor UbiK	85.1	69.0	88.8
MGA_850	LOCUS_08360	sequence14:160174..160578(+)	frameshift,internal_stop_codon	160124..160126(+),160577..160579(+)	160201	WP_011266856.1	transporter substrate-binding domain-containing protein	91.8	46.8	58.1
MGA_894	LOCUS_08800	sequence14:212404..212964(+)	partial			WP_014206555.1	fimbrial protein	58.6	63.7	34.1
MGA_918	LOCUS_09040	sequence14:244515..244736(-)	partial			WP_013097221.1	amino acid ABC transporter ATP-binding protein	100.0	50.6	44.4
MGA_924	LOCUS_09100	sequence14:251573..251755(+)	frameshift		251743	WP_001173804.1	IS1 family transposase	90.0	41.2	87.0
MGA_925	LOCUS_09110	sequence14:251752..251964(+)	frameshift		251743	WP_001173804.1	IS1 family transposase	94.3	50.4	77.3
MGA_939	LOCUS_09250	sequence14:264445..264948(-)	partial			WP_013098666.1	YggS family pyridoxal phosphate-dependent enzyme	99.4	72.5	70.4
MGA_978	LOCUS_09640	sequence14:306458..307369(+)	frameshift		306345	WP_010989230.1	peptide chain release factor 2	100.0	83.0	89.1
MGA_991	LOCUS_09770	sequence14:323951..324373(-)	partial			WP_000470506.1	lytic transglycosylase domain-containing protein	85.0	66.7	31.9
MGA_999	LOCUS_09850	sequence14:331060..331503(-)	partial			WP_005176294.1	transcription/translation regulatory transformer protein RfaH	74.8	64.8	36.4
MGA_1002	LOCUS_09880	sequence14:334788..336791(+)	frameshift		336674	WP_011816989.1	molybdopterin guanine dinucleotide-containing S/N-oxide reductase	94.0	83.2	68.7
MGA_1003	LOCUS_09890	sequence14:336701..337042(+)	frameshift		336674	WP_011816989.1	molybdopterin guanine dinucleotide-containing S/N-oxide reductase	99.1	14.9	67.0
MGA_1006	LOCUS_09920	sequence14:341402..342067(+)	frameshift		341998	WP_000004684.1	lysophospholipid transporter LplT	97.7	54.0	64.8
MGA_1007	LOCUS_09930	sequence14:342079..342606(+)	frameshift		341998	WP_000004684.1	lysophospholipid transporter LplT	99.4	43.5	67.2
MGA_1020	LOCUS_10060	sequence14:354503..354757(-)	frameshift,internal_stop_codon	354776..354778(-)	354508,354613	WP_013095881.1	beta-galactosidase	57.1	4.7	58.3
MGA_1021	LOCUS_10070	sequence14:354776..355027(-)	frameshift,internal_stop_codon	354775..354777(-)	355113,354609	WP_013098161.1	beta-galactosidase	97.6	7.9	48.1
MGA_1022	LOCUS_10080	sequence14:355552..355857(+)	partial			WP_002210747.1	PsiF family protein	76.2	71.2	65.8
MGA_1026	LOCUS_10120	sequence14:358663..359004(-)	frameshift,internal_stop_codon	359056..359058(-)	358716	WP_001285833.1	D-alanyl-D-alanine dipeptidase	90.3	52.8	65.7
MGA_1086	LOCUS_10720	sequence14:428715..429722(+)	frameshift,internal_stop_codon	428614..428616(+),428617..428619(+),428662..428664(+)	428589	WP_013096858.1	methyl-accepting chemotaxis protein	95.5	57.9	63.8
MGA_1165	LOCUS_11500	sequence14:513858..514280(-)	partial			WP_001028612.1	phosphoribosylglycinamide formyltransferase	98.6	65.1	75.4
MGA_1182	LOCUS_11670	sequence14:529857..530045(-)	partial			WP_000383836.1	YpfN family protein	79.0	74.2	63.3
MGA_1220	LOCUS_12050	sequence14:575458..575886(+)	partial			WP_000467655.1	GNAT family protein	71.1	55.8	27.7
MGA_1225	LOCUS_12100	sequence14:580929..581132(-)	partial			WP_049047834.1	AlpA family transcriptional regulator	74.6	72.5	50.0
MGA_1227	LOCUS_12120	sequence15:1..1869(+)	partial			WP_011204623.1	non-ribosomal peptide synthetase	98.2	18.5	32.4
MGA_1259	LOCUS_12440	sequence15:50699..50920(+)	partial			WP_015703275.1	SelT/SelW/SelH family protein	90.4	68.0	57.6
MGA_1274	LOCUS_12590	sequence15:65143..65460(+)	frameshift,internal_stop_codon	65465..65467(+),65738..65740(+)	65457	WP_011817247.1	glutathione S-transferase family protein	84.8	26.8	65.2
MGA_1275	LOCUS_12600	sequence15:65585..65740(+)	frameshift,internal_stop_codon	65465..65467(+),65961..65963(+),65738..65740(+),65907..65909(+),65819..65821(+)	65457,66011	WP_011193135.1	glutathione S-transferase family protein	100.0	15.5	70.6
MGA_1282	LOCUS_12670	sequence15:69741..70259(-)	partial			WP_000153061.1	Ni(II)/Co(II) efflux transporter accessory subunit RcnB	43.6	67.0	57.3
MGA_1320	LOCUS_13050	sequence15:115821..120140(-)	partial			WP_054993202.1	RHS repeat-associated core domain-containing protein	71.0	74.8	33.1
MGA_1321	LOCUS_13060	sequence15:120133..120495(-)	partial			WP_010973208.1	polymorphic toxin type 15 domain-containing protein	92.5	21.3	37.2
MGA_1347	LOCUS_13320	sequence15:156816..157115(-)	frameshift		157131	WP_096777772.1	IS1 family transposase	90.9	39.0	66.7
MGA_1356	LOCUS_13410	sequence15:172395..172931(+)	frameshift,internal_stop_codon	172245..172247(+)	172928	WP_001118645.1	IS5 family transposase	100.0	58.0	92.7
MGA_1357	LOCUS_13420	sequence15:172997..173137(+)	frameshift		172928	WP_176682092.1	IS5-like element IS903B family transposase	100.0	14.3	95.7
MGA_1358	LOCUS_13430	sequence15:173177..173377(-)	partial			WP_001301682.1	integrase arm-type DNA-binding domain-containing protein	51.5	12.4	79.4
MGA_1390	LOCUS_13750	sequence15:208450..208779(+)	frameshift,internal_stop_codon	208290..208292(+),208266..208268(+)	208445,208199	WP_011817289.1	IS4 family transposase	100.0	28.0	67.6
MGA_1450	LOCUS_14350	sequence15:272319..272522(-)	partial			WP_001116614.1	p-hydroxybenzoic acid efflux pump operon protein AaeX	100.0	74.4	80.6
MGA_1475	LOCUS_14600	sequence16:6185..6697(-)	partial			WP_013098331.1	tRNA-uridine aminocarboxypropyltransferase	95.3	69.4	70.4
MGA_1497	LOCUS_14820	sequence16:27875..28324(-)	frameshift,internal_stop_codon	27989..27991(-),28439..28441(-),27794..27796(-)	27997,27919	WP_017694613.1	primase-like DNA-binding domain-containing protein	73.2	14.0	80.7
MGA_1498	LOCUS_14830	sequence16:28711..28932(+)	frameshift		28658,28565	WP_013097381.1	hypothetical protein	69.9	21.2	70.6
MGA_1501	LOCUS_14860	sequence16:31454..31987(+)	internal_stop_codon	31985..31987(+)		WP_000343760.1	ISL3-like element ISKox3 family transposase	99.4	43.3	80.1
MGA_1502	LOCUS_14870	sequence16:32021..32674(+)	internal_stop_codon	31985..31987(+)		WP_000343766.1	ISL3-like element ISEc53 family transposase	98.6	52.7	60.7
MGA_1534	LOCUS_15190	sequence16:63392..64525(+)	partial			WP_202694179.1	cell envelope integrity protein TolA	36.3	33.4	53.5
MGA_1577	LOCUS_15620	sequence16:107094..107330(+)	frameshift,internal_stop_codon	107353..107355(+)	107324	WP_011038639.1	DUF1615 domain-containing protein	93.6	20.1	45.2
MGA_1578	LOCUS_15630	sequence16:107380..107757(+)	frameshift,internal_stop_codon	107353..107355(+),107755..107757(+)	107324,108015	WP_166493634.1	DUF1615 family protein	100.0	34.2	63.2
MGA_1579	LOCUS_15640	sequence16:107809..108105(+)	frameshift,internal_stop_codon	107755..107757(+)	108015	WP_166493634.1	DUF1615 family protein	71.4	19.1	48.6
MGA_1594	LOCUS_15790	sequence16:127468..127677(+)	frameshift,internal_stop_codon	127432..127434(+)	127321,127394,127671	WP_002210785.1	suppressor of fused domain protein	97.1	18.3	53.7
MGA_1595	LOCUS_15800	sequence16:127679..127945(+)	frameshift,internal_stop_codon	127432..127434(+)	127671	WP_002210785.1	suppressor of fused domain protein	83.0	19.9	38.4
MGA_1600	LOCUS_15850	sequence16:132707..133153(+)	frameshift		132636,132567	WP_000427614.1	IS110-like element IS5075 family transposase	82.4	36.5	82.8
MGA_1601	LOCUS_15860	sequence16:133051..133431(-)	partial			WP_011073373.1	IS481-like element ISSod13 family transposase	57.9	20.8	41.1
MGA_1602	LOCUS_15870	sequence16:133825..141564(-)	partial			WP_011263929.1	hypothetical protein	32.9	24.0	25.1
MGA_1603	LOCUS_15880	sequence16:142177..142407(+)	partial			WP_002211754.1	recombinase family protein	96.1	35.9	67.6
MGA_1604	LOCUS_15890	sequence16:142524..142724(+)	internal_stop_codon	142722..142724(+)		WP_139109842.1	Rpn family recombination-promoting nuclease/putative transposase	100.0	64.7	87.9
MGA_1612	LOCUS_15970	sequence16:149912..150091(-)	frameshift,internal_stop_codon	150095..150097(-)	149935	WP_109982256.1	urocanate hydratase	88.1	9.3	55.8
MGA_1654	LOCUS_16390	sequence16:195285..195524(+)	frameshift		195683	WP_011263274.1	ATP-dependent endonuclease	78.5	11.4	51.6
MGA_1655	LOCUS_16400	sequence16:195731..196048(+)	frameshift		195683	WP_002211356.1	ATP-dependent endonuclease	84.8	16.0	48.3
MGA_1707	LOCUS_16920	sequence16:269856..270038(-)	frameshift,internal_stop_codon	269854..269856(-)	269712,269571,269625,270123,270207	WP_011817289.1	IS4 family transposase	100.0	15.1	75.0
MGA_1726	LOCUS_17110	sequence16:288210..288647(-)	frameshift		288715	WP_000090115.1	NAD(P)H:quinone oxidoreductase	98.6	79.0	86.0
MGA_1735	LOCUS_17200	sequence16:298534..298704(+)	frameshift,internal_stop_codon	298991..298993(+),298703..298705(+),298319..298321(+)	298888,298522,298963	WP_224430502.1	IS3 family transposase	100.0	12.4	58.9
MGA_1787	LOCUS_17720	sequence16:349842..350444(+)	partial			WP_002213089.1	penicillin-binding protein activator LpoB	71.5	74.9	55.9
MGA_1811	LOCUS_17960	sequence16:375368..375634(-)	partial			WP_000538708.1	biofilm/acid-resistance regulator YmgB/AriR	65.9	75.3	50.0
MGA_1820	LOCUS_18050	sequence16:383429..383746(+)	frameshift,internal_stop_codon	383367..383369(+)	383420	WP_128178822.1	glycosyltransferase	96.2	30.3	33.7
MGA_1821	LOCUS_18060	sequence16:384357..384782(+)	frameshift		384644	WP_011261026.1	flippase	66.7	22.5	42.6
MGA_1873	LOCUS_18580	sequence16:445273..446514(+)	partial			WP_003413692.1	PAAR domain-containing protein	19.6	48.9	43.5
MGA_1874	LOCUS_18590	sequence16:446939..447121(+)	partial			WP_000904922.1	recombinase family protein	80.0	25.3	60.4
MGA_1891	LOCUS_18760	sequence16:463625..466525(+)	partial			WP_013096251.1	nitrite reductase large subunit NirB	98.3	69.5	68.3
MGA_1892	LOCUS_18770	sequence16:466522..467364(+)	partial			WP_014207488.1	siroheme synthase CysG	83.9	51.4	57.9
MGA_1896	LOCUS_18810	sequence16:469645..470289(-)	partial			WP_013097025.1	excinuclease Cho	100.0	73.3	58.9
MGA_1907	LOCUS_18920	sequence16:480931..481272(+)	partial			WP_023616141.1	translation initiation factor IF-3	100.0	62.8	85.0
MGA_1913	LOCUS_18980	sequence16:487092..487592(+)	frameshift		486955	WP_015705117.1	vitamin B12 ABC transporter permease BtuC	99.4	50.3	68.5
MGA_1915	LOCUS_19000	sequence16:488176..488445(+)	frameshift,internal_stop_codon	488443..488445(+)	488592	WP_015705120.1	vitamin B12 ABC transporter ATP-binding protein BtuD	100.0	35.7	50.6
MGA_1916	LOCUS_19010	sequence16:488558..488944(+)	frameshift,internal_stop_codon	488443..488445(+)	488604	WP_013096997.1	vitamin B12 ABC transporter ATP-binding protein BtuD	78.1	39.8	48.0
MGA_1920	LOCUS_19050	sequence16:491968..492801(-)	internal_stop_codon	492847..492849(-)		WP_001082213.1	3-deoxy-7-phosphoheptulonate synthase AroH	99.3	79.3	72.1
MGA_1952	LOCUS_19370	sequence16:527415..528413(-)	frameshift		528444	WP_000763511.1	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	100.0	62.5	73.8
MGA_1953	LOCUS_19380	sequence16:528442..529020(-)	frameshift		528444	WP_015366209.1	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	99.5	36.0	78.5
MGA_1958	LOCUS_19430	sequence16:533468..533965(-)	internal_stop_codon	534050..534052(-)		WP_001278854.1	cob(I)yrinic acid a,c-diamide adenosyltransferase	100.0	84.2	71.5
MGA_1977	LOCUS_19620	sequence16:561019..561438(+)	frameshift,internal_stop_codon	560876..560878(+),560747..560749(+)	561184,560953	WP_011816367.1	LysR family transcriptional regulator	39.6	18.7	58.2
MGA_1998	LOCUS_19830	sequence16:578921..579322(-)	frameshift,internal_stop_codon	579285..579287(-)	579275,578956	WP_015705658.1	murein tripeptide amidase MpaA	79.7	44.7	67.9
MGA_2021	LOCUS_20060	sequence16:605876..606061(-)	frameshift		606185,606234,606075,606157	WP_111740417.1	IS4 family transposase	72.1	10.1	66.7
MGA_2027	LOCUS_20120	sequence16:613145..613405(+)	internal_stop_codon	613136..613138(+),613403..613405(+),613427..613429(+)		WP_001046824.1	DNA endonuclease SmrA	100.0	45.5	51.2
MGA_2031	LOCUS_20160	sequence16:618056..618721(-)	partial			WP_003099330.1	spore coat U domain-containing protein	74.2	51.7	34.3
MGA_2036	LOCUS_20210	sequence16:624195..624461(+)	partial			WP_000605090.1	DUF2534 family protein	70.5	72.9	48.4
MGA_2059	LOCUS_20440	sequence16:649349..649645(+)	frameshift		649600,649597	WP_092874936.1	IS1 family transposase	88.8	37.7	97.7
MGA_2060	LOCUS_20450	sequence16:649647..650042(+)	frameshift		649600,649597	WP_092874936.1	IS1 family transposase	100.0	56.7	93.1
MGA_2068	LOCUS_20530	sequence16:662208..663206(-)	partial			WP_011205034.1	YadA-like family protein	95.2	26.6	34.4
MGA_2070	LOCUS_20550	sequence16:664266..665150(-)	partial			WP_011248970.1	tungstate ABC transporter substrate-binding protein WtpA	81.0	70.1	28.4
MGA_2071	LOCUS_20560	sequence16:665728..665940(+)	internal_stop_codon	665698..665700(+)		WP_015704178.1	L-ribulose-5-phosphate 4-epimerase	60.0	18.4	73.8
MGA_2077	LOCUS_20620	sequence16:671703..672551(-)	partial			WP_004200855.1	chloride channel protein	98.6	62.1	42.1
MGA_2086	LOCUS_20710	sequence16:685424..686158(-)	partial			WP_013532810.1	glycosyltransferase family 9 protein	66.8	46.4	29.9
MGA_2146	LOCUS_21310	sequence16:750033..750299(+)	frameshift,internal_stop_codon	750297..750299(+)	750374	WP_100293061.1	recombinase family protein	98.9	41.2	79.3
MGA_2147	LOCUS_21320	sequence17:4..1182(+)	partial			WP_000949083.1	lateral flagellin LafA	36.2	52.0	39.9
MGA_2151	LOCUS_21360	sequence17:3588..4817(+)	partial			WP_002211415.1	flagellar hook-length control protein FliK	36.7	35.4	42.4
MGA_2163	LOCUS_21480	sequence17:14988..15905(-)	frameshift,internal_stop_codon	14994..14996(-)	15053	WP_005167887.1	endolytic peptidoglycan transglycosylase RlpA	90.5	74.8	54.0
MGA_2173	LOCUS_21580	sequence17:25499..26245(-)	frameshift		26259,26365	WP_013097582.1	pyrimidine-specific ribonucleoside hydrolase RihA	100.0	79.2	51.2
MGA_2271	LOCUS_22560	sequence18:73156..74382(+)	frameshift,internal_stop_codon	74630..74632(+),74585..74587(+)	74539,74349	WP_002209560.1	biofilm formation regulator HmsP	98.3	60.1	44.7
MGA_2283	LOCUS_22680	sequence18:91578..92636(+)	frameshift,internal_stop_codon	92635..92637(+)	91536,92811	WP_224144836.1	hemagglutinin repeat-containing protein	98.3	12.3	52.7
MGA_2309	LOCUS_22940	sequence18:116756..121078(-)	partial			WP_054993202.1	RHS repeat-associated core domain-containing protein	72.7	74.8	32.4
MGA_2311	LOCUS_22960	sequence18:122700..122969(-)	frameshift,internal_stop_codon	122974..122976(-),123058..123060(-),123040..123042(-)	123120,123147,122733	WP_002209571.1	kdo(2)-lipid A phosphoethanolamine 7''-transferase	97.8	15.5	51.7
MGA_2314	LOCUS_22990	sequence18:125872..126123(-)	partial			WP_001572362.1	IS110 family transposase	80.7	19.7	65.7
MGA_2333	LOCUS_23180	sequence19:21354..>22157(-)	partial			WP_023620081.1	elongation factor Tu	99.6	67.5	92.5
MGA_2352	LOCUS_23370	sequence20:22180..22419(+)	frameshift,internal_stop_codon	21972..21974(+),22104..22106(+)	22259	WP_002211859.1	LuxR family transcriptional regulator	89.9	29.0	43.7
MGA_2384	LOCUS_23690	sequence20:53957..54967(-)	partial			WP_001292317.1	glycosyltransferase family 2 protein	64.9	73.7	27.2
MGA_2386	LOCUS_23710	sequence20:56228..57394(-)	partial			WP_002994187.1	glycosyltransferase family 4 protein	39.9	37.8	27.8
MGA_2390	LOCUS_23750	sequence20:60817..61197(-)	internal_stop_codon	61213..61215(-)		WP_013094917.1	divergent polysaccharide deacetylase family protein	81.0	33.2	51.5
MGA_2391	LOCUS_23760	sequence20:61213..61776(-)	internal_stop_codon	61213..61215(-)		WP_013094917.1	divergent polysaccharide deacetylase family protein	96.3	58.1	71.1
MGA_2402	LOCUS_23870	sequence20:70273..70560(+)	partial			WP_003231362.1	TM2 domain-containing protein	68.4	82.3	64.6
MGA_2432	LOCUS_24170	sequence20:101137..102129(+)	frameshift,internal_stop_codon	101078..101080(+)	101047	WP_011815625.1	beta-ketoacyl-[acyl-carrier-protein] synthase family protein	98.2	77.6	49.8
MGA_2434	LOCUS_24190	sequence20:103125..103577(+)	internal_stop_codon	103575..103577(+)		WP_046051542.1	SDR family NAD(P)-dependent oxidoreductase	96.0	58.6	34.0
MGA_2435	LOCUS_24200	sequence20:103605..103865(+)	internal_stop_codon	103575..103577(+)		WP_200832809.1	SDR family oxidoreductase	100.0	35.1	52.3
MGA_2439	LOCUS_24240	sequence20:105574..106362(+)	partial			WP_000431862.1	bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase	95.8	42.7	43.0
MGA_2475	LOCUS_24600	sequence21:22000..22719(+)	partial			WP_002210945.1	C40 family peptidase	90.4	73.9	46.3
MGA_2480	LOCUS_24650	sequence21:26410..26661(-)	frameshift		26835,26676,26925,26412	WP_000994698.1	murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF	100.0	24.3	69.9
MGA_2481	LOCUS_24660	sequence21:26631..26837(-)	frameshift		26835,26412,26925,26679	WP_013096274.1	murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF	76.5	15.6	82.7
MGA_2482	LOCUS_24670	sequence21:26896..27135(-)	frameshift		27152,26834,26924,26678	WP_013096274.1	murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF	88.6	22.8	67.1
MGA_2483	LOCUS_24680	sequence21:27182..27427(-)	partial			WP_015367070.1	oligopeptide ABC transporter substrate-binding protein OppA	70.4	10.5	47.4
MGA_2492	LOCUS_24770	sequence21:39128..39484(+)	partial			WP_001307143.1	YchJ family protein	86.4	67.8	44.7
MGA_2495	LOCUS_24800	sequence21:41630..41956(-)	partial			WP_000085228.1	DUF1496 domain-containing protein	63.0	74.4	42.6
MGA_2501	LOCUS_24860	sequence21:47947..48267(+)	partial			WP_000184700.1	bifunctional nicotinamidase/pyrazinamidase	47.2	23.4	58.8
MGA_2564	LOCUS_25490	sequence21:120823..121452(+)	partial			WP_010965483.1	DUF1919 domain-containing protein	45.9	34.4	29.2
MGA_2565	LOCUS_25500	sequence21:121516..122424(-)	partial			WP_001162640.1	phage tail protein	50.3	28.8	35.9
MGA_2567	LOCUS_25520	sequence21:122588..123367(-)	partial			WP_115765672.1	DNA-binding protein	64.9	63.3	43.9
MGA_2568	LOCUS_25530	sequence21:123435..123974(-)	frameshift		123978,123996	WP_222698672.1	P22AR C-terminal domain-containing protein	64.2	52.2	53.1
MGA_2582	LOCUS_25670	sequence21:132496..133974(-)	partial			WP_001135544.1	DUF3383 family protein	61.2	77.4	63.0
MGA_2587	LOCUS_25720	sequence21:135840..136211(-)	partial			WP_001040702.1	hypothetical protein	74.8	80.3	36.7
MGA_2593	LOCUS_25780	sequence21:141109..142740(-)	partial			WP_001300443.1	PBSX family phage terminase large subunit	45.9	52.7	34.9
MGA_2597	LOCUS_25810	sequence22:489..800(+)	partial			WP_222698672.1	P22AR C-terminal domain-containing protein	76.7	36.1	53.8
MGA_2598	LOCUS_25820	sequence22:1129..1827(+)	partial			WP_002211732.1	Bro-N domain-containing protein	57.8	64.2	41.0
MGA_2609	LOCUS_25930	sequence22:10252..12111(-)	partial			WP_014207442.1	lytic transglycosylase domain-containing protein	23.9	56.4	34.8
MGA_2633	LOCUS_26170	sequence23:2835..3338(-)	partial			WP_013098484.1	transcriptional regulator	74.9	47.6	32.6
MGA_2654	LOCUS_26380	sequence23:23860..24105(+)	frameshift		23639	WP_000942660.1	RNA-guided endonuclease TnpB family protein	100.0	20.8	70.4
MGA_2659	LOCUS_26430	sequence23:26208..26975(-)	partial			WP_004551893.1	SctJ family type III secretion inner membrane ring lipoprotein Bas	83.1	67.1	40.6
MGA_2664	LOCUS_26480	sequence23:30338..31204(+)	partial			WP_011205640.1	T3SS3/T6SS1 transcriptional regulator BsaN	39.6	50.7	46.5
MGA_2679	LOCUS_26630	sequence23:47030..48103(+)	partial			WP_010921661.1	type III secretion system needle tip complex protein IpaD	73.9	80.4	28.2
MGA_2687	LOCUS_26710	sequence23:61683..61856(+)	internal_stop_codon	61854..61856(+)		WP_011817166.1	isochorismatase family protein	98.2	32.0	60.7
MGA_2688	LOCUS_26720	sequence23:61976..62446(+)	partial			WP_005168012.1	DUF979 domain-containing protein	99.4	45.7	74.2
MGA_2696	LOCUS_26800	sequence23:70942..71238(+)	frameshift,internal_stop_codon	71236..71238(+)	71241	WP_100293061.1	recombinase family protein	100.0	46.4	77.6
MGA_2702	LOCUS_26840	sequence24:2182..2403(-)	partial			WP_005161370.1	phage holin family protein	67.1	84.5	55.1
MGA_2723	LOCUS_27050	sequence24:11217..11672(+)	partial			WP_000872385.1	LexA family transcriptional regulator	42.4	29.5	46.9
MGA_2725	LOCUS_27060	sequence25:10..1311(-)	partial			WP_005462780.1	lateral flagellin LafA	31.2	47.5	51.9
MGA_2727	LOCUS_27080	sequence25:2817..3503(+)	partial			WP_002211422.1	transcriptional regulator	49.1	32.2	53.6
MGA_2762	LOCUS_27430	sequence25:32771..32989(+)	partial			WP_002215270.1	AlpA family phage regulatory protein	66.7	80.0	47.9
MGA_2782	LOCUS_27630	sequence25:51120..51752(-)	frameshift		51817	WP_011816863.1	bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA	97.6	37.3	75.1
MGA_2783	LOCUS_27640	sequence25:51785..52783(-)	frameshift		51817	WP_011816863.1	bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA	96.4	58.2	76.9
MGA_2798	LOCUS_27790	sequence25:67686..68696(+)	internal_stop_codon	68694..68696(+)		WP_013095891.1	multidrug efflux RND transporter periplasmic adaptor subunit AcrA	99.1	83.9	73.0
MGA_2816	LOCUS_27970	sequence25:87527..87715(-)	internal_stop_codon	87527..87529(-)		WP_001194543.1	long-chain acyl-CoA thioesterase FadM	79.0	37.1	55.1
MGA_2834	LOCUS_28150	sequence25:107157..107435(-)	frameshift		107401,107714,107479,107674	WP_011088401.1	alcohol dehydrogenase AdhP	85.9	23.2	59.5
MGA_2836	LOCUS_28170	sequence25:108008..108172(-)	frameshift,internal_stop_codon	108008..108010(-)	107776	WP_037401196.1	alcohol dehydrogenase AdhP	96.3	15.2	65.4
MGA_2880	LOCUS_28610	sequence25:152152..152508(+)	frameshift,internal_stop_codon	152088..152090(+),152595..152597(+)	152114,152486,152642,152126	WP_015705384.1	aldo/keto reductase	95.8	33.6	68.1
MGA_2881	LOCUS_28620	sequence25:152720..153103(+)	frameshift,internal_stop_codon	152593..152595(+)	152640,152484,152905,152874,152971,152974	WP_015705384.1	aldo/keto reductase	70.1	27.2	54.3
MGA_2923	LOCUS_29020	sequence26:671..880(-)	frameshift		876,711	WP_010908328.1	CDP-diacylglycerol diphosphatase	73.9	19.0	47.1
MGA_2928	LOCUS_29070	sequence26:6361..6675(-)	partial			WP_001239419.1	AAA family ATPase	95.2	16.3	65.7
MGA_2930	LOCUS_29090	sequence26:9395..9619(-)	partial			WP_046092923.1	IS630-like element ISEc33 family transposase	94.6	21.0	75.0
MGA_2934	LOCUS_29130	sequence26:13824..14072(+)	frameshift,internal_stop_codon	13776..13778(+)	13648	WP_013214009.1	site-specific integrase	97.6	30.9	86.2
MGA_2943	LOCUS_29220	sequence26:22907..23266(+)	frameshift,internal_stop_codon	23265..23267(+)	22685	WP_001276238.1	plasmid SOS inhibition protein A	97.5	48.1	50.9
MGA_2946	LOCUS_29250	sequence26:25772..26137(-)	partial			WP_000092275.1	prophage endopeptidase RzpD	80.2	62.1	33.0
MGA_2948	LOCUS_29270	sequence26:27209..27397(-)	partial			WP_013087142.1	hypothetical protein	67.7	27.1	57.1
MGA_2950	LOCUS_29290	sequence26:28097..28612(+)	frameshift		28591,27863	WP_156168750.1	IS3 family transposase	98.8	51.0	66.2
MGA_2964	LOCUS_29430	sequence26:47242..48081(-)	partial			WP_013226206.1	sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein	93.2	43.4	35.9
MGA_2965	LOCUS_29440	sequence26:48743..52651(-)	partial			WP_011204369.1	hypothetical protein	20.4	74.1	35.0
MGA_2971	LOCUS_29500	sequence27:1..804(+)	partial			WP_023620081.1	elongation factor Tu	99.6	67.5	92.5
MGA_3013	LOCUS_29920	sequence28:677..1078(+)	partial			WP_005693952.1	terminase small subunit	88.7	70.2	39.2
MGA_3039	LOCUS_30180	sequence28:20416..21330(+)	partial			WP_000204917.1	phage antirepressor Ant	68.1	67.4	72.0
MGA_3047	LOCUS_30260	sequence28:26108..26860(-)	partial			WP_001061379.1	KilA-N domain-containing protein	42.0	41.3	52.3
MGA_3051	LOCUS_30300	sequence28:29217..29483(+)	frameshift,internal_stop_codon	29181..29183(+),29490..29492(+)	29456,29585,29756	WP_000772672.1	integrase arm-type DNA-binding domain-containing protein	89.8	18.8	70.9
MGA_3052	LOCUS_30310	sequence28:29617..29784(+)	frameshift,internal_stop_codon	29490..29492(+)	29456,29762,29588	WP_015704141.1	integrase arm-type DNA-binding domain-containing protein	81.8	10.8	60.0
MGA_3053	LOCUS_30320	sequence28:29726..30445(+)	frameshift,internal_stop_codon	29490..29492(+)	29585,29756,29462	WP_193821696.1	integrase arm-type DNA-binding domain-containing protein	88.3	50.1	58.3
MGA_3079	LOCUS_30580	sequence28:58268..59350(-)	internal_stop_codon	59462..59464(-)		WP_001115839.1	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	99.2	45.3	65.3
MGA_3080	LOCUS_30590	sequence28:59462..59887(-)	internal_stop_codon	59462..59464(-)		WP_001115839.1	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	97.9	17.5	56.5
MGA_3095	LOCUS_30740	sequence28:73440..73574(+)	internal_stop_codon	73572..73574(+)		WP_013098125.1	glutathione transferase	90.9	18.7	57.5
MGA_3102	LOCUS_30810	sequence28:80064..80255(+)	frameshift,internal_stop_codon	80023..80025(+),79796..79798(+)	79916,80085,79807	WP_021013205.1	sugar phosphatase	90.5	24.9	64.9
MGA_3141	LOCUS_31200	sequence28:131794..132189(-)	partial			WP_002208822.1	bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase	100.0	67.5	78.6
MGA_3149	LOCUS_31280	sequence28:141547..142365(-)	internal_stop_codon	142492..142494(-)		WP_015706115.1	YeiH family protein	99.6	76.8	60.1
MGA_3170	LOCUS_31490	sequence28:165313..165450(+)	frameshift		165141	WP_015365768.1	class I fructose-bisphosphate aldolase	97.8	19.1	50.7
MGA_3189	LOCUS_31680	sequence28:190940..191428(+)	frameshift		190895	WP_000862615.1	colanic acid biosynthesis glycosyltransferase WcaL	95.7	38.4	50.0
MGA_3215	LOCUS_31930	sequence29:2325..3050(+)	partial			WP_042642164.1	helix-turn-helix domain-containing protein	58.5	55.7	60.3
