{ "type": "genome", "identifier": "GCF_900115085.1", "organism": "Dokdonella immobilis", "title": "Dokdonella immobilis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE - JOINT GENOME INSTITUTE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900115085.1", "bioproject": "PRJNA224116", "biosample": "SAMN05216289", "wgs_master": "FOVF00000000.1", "refseq_category": "reference genome", "taxid": "578942", "species_taxid": "578942", "organism_name": "Dokdonella immobilis", "infraspecific_name": "strain=CGMCC 1.7659", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/11/02", "asm_name": "IMG-taxon 2667527410 annotated assembly", "asm_submitter": "DOE - JOINT GENOME INSTITUTE", "gbrs_paired_asm": "GCA_900115085.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/115/085/GCF_900115085.1_IMG-taxon_2667527410_annotated_assembly", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4635835", "genome_size_ungapped": "4634500", "gc_percent": "65.000000", "replicon_count": "0", "scaffold_count": "78", "contig_count": "78", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900115085.1-RS_2024_05_03", "annotation_date": "2024-05-03", "total_gene_count": "3957", "protein_coding_gene_count": "3853", "non_coding_gene_count": "53", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-11-02", "dateModified": "2016-11-02", "datePublished": "2016-11-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Dokdonella immobilis" ], "sample_taxid": [ "578942" ], 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"status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": 0.602, "cell_length": 0.602, "doubling_h": null, "growth_tmp": 31.25, "optimum_tmp": 25.0, "optimum_ph": 6.75, "genome_size": 4635835.0, "gc_content": 70.3, "coding_genes": 3647.0, "rRNA16S_genes": 2.0, "tRNA_genes": 47.0, "gram_stain": 0.0, "sporulation": 0.0, "motility": 0.0, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": null, "thermophilic_range_tmp": null, "psychrophilic_range_tmp": null, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Dokdonella", "immobilis" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }