{ "type": "genome", "identifier": "GCF_900128415.1", "organism": "Anaerococcus mediterraneensis", "title": "Anaerococcus mediterraneensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "URMITE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900128415.1", "bioproject": "PRJNA224116", "biosample": "SAMEA4555797", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "1870984", "species_taxid": "1870984", "organism_name": "Anaerococcus mediterraneensis", "infraspecific_name": "strain=Marseille-P2765T", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/11/25", "asm_name": "PRJEB15655", "asm_submitter": "URMITE", "gbrs_paired_asm": "GCA_900128415.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/128/415/GCF_900128415.1_PRJEB15655", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2080215", "genome_size_ungapped": "2080215", "gc_percent": "34.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900128415.1-RS_2024_12_11", "annotation_date": "2024-12-11", "total_gene_count": "2063", "protein_coding_gene_count": "1967", "non_coding_gene_count": "57", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-11-25", "dateModified": "2016-11-25", "datePublished": "2016-11-25", "_annotation": { "sample_count": 1, "sample_organism": [ "Anaerococcus mediterraneensis" ], "sample_taxid": [ "1870984" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], 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"ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Anaerococcus degeneri", "strain": "strain=FDAARGOS_1538", "accession": "GCA_020215685.1", "taxid": 361500, "species_taxid": 361500, "relation_to_type": "type", "validated": true, "ani": 82.9668, "matched_fragments": 347, "total_fragments": 693, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anaerococcus murdochii", "strain": "strain=FDAARGOS_1460", "accession": "GCA_019957155.1", "taxid": 411577, "species_taxid": 411577, "relation_to_type": "type", "validated": true, "ani": 82.9601, "matched_fragments": 349, "total_fragments": 693, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anaerococcus degeneri", "strain": "strain=DSM 29674", "accession": "GCA_017874475.1", "taxid": 361500, "species_taxid": 361500, "relation_to_type": "type", "validated": true, "ani": 82.8108, "matched_fragments": 338, "total_fragments": 693, "ani_threshold": 95, "status": "below_threshold" }, { 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"num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.206, "cell_length": -0.206, "doubling_h": null, "growth_tmp": 37.0, "optimum_tmp": 37.0, "optimum_ph": 7.0, "genome_size": 2080212.5, "gc_content": 34.6, "coding_genes": 1930.0, "rRNA16S_genes": 3.0, "tRNA_genes": 44.0, "gram_stain": 1.0, "sporulation": 0.0, "motility": 0.0, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 1.0, "aerobic_respiration": 0.0, "mesophilic_range_tmp": 1.0, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 0.0, "coccus_cell_shape": 1.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Anaerococcus", "mediterraneensis" ], "quality": 5, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }