{ "type": "genome", "identifier": "GCF_900141845.1", "organism": "Clostridium cavendishii DSM 21758", "title": "Clostridium cavendishii DSM 21758", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE - JOINT GENOME INSTITUTE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900141845.1", "bioproject": "PRJNA224116", "biosample": "SAMN02745163", "wgs_master": "FQZB00000000.1", "refseq_category": "reference genome", "taxid": "1121302", "species_taxid": "349931", "organism_name": "Clostridium cavendishii DSM 21758", "infraspecific_name": "strain=DSM 21758", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/12/03", "asm_name": "IMG-taxon 2585428089 annotated assembly", "asm_submitter": "DOE - JOINT GENOME INSTITUTE", "gbrs_paired_asm": "GCA_900141845.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/141/845/GCF_900141845.1_IMG-taxon_2585428089_annotated_assembly", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4987666", "genome_size_ungapped": "4982341", "gc_percent": "28.000000", "replicon_count": "0", "scaffold_count": "56", "contig_count": "56", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900141845.1-RS_2024_04_12", "annotation_date": "2024-04-12", "total_gene_count": "4599", "protein_coding_gene_count": "4472", "non_coding_gene_count": "86", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-12-03", "dateModified": "2016-12-03", "datePublished": "2016-12-03", "_annotation": { "sample_count": 1, "sample_organism": [ "Clostridium cavendishii DSM 21758" ], "sample_taxid": [ "1121302" ], 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium thermobutyricum", "strain": "strain=DSM 4928", "accession": "GCA_002050515.1", "taxid": 29372, "species_taxid": 29372, "relation_to_type": "type", "validated": true, "ani": 76.9209, "matched_fragments": 265, "total_fragments": 1636, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium cibarium", "strain": "strain=Sa3CVN1", "accession": "GCA_014836335.1", "taxid": 2762247, "species_taxid": 2762247, "relation_to_type": "type", "validated": true, "ani": 76.8315, "matched_fragments": 237, "total_fragments": 1636, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium gasigenes", "strain": "strain=DSM 12272", "accession": "GCA_900104115.1", "taxid": 94869, "species_taxid": 94869, "relation_to_type": "type", "validated": true, "ani": 76.7817, "matched_fragments": 293, "total_fragments": 1636, "ani_threshold": 95, "status": "below_threshold" }, { 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