{ "type": "genome", "identifier": "GCF_900155685.1", "organism": "Paenibacillus bouchesdurhonensis", "title": "Paenibacillus bouchesdurhonensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "URMITE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900155685.1", "bioproject": "PRJNA224116", "biosample": "SAMEA48316168", "wgs_master": "FTLT00000000.1", "refseq_category": "reference genome", "taxid": "1870990", "species_taxid": "1870990", "organism_name": "Paenibacillus bouchesdurhonensis", "infraspecific_name": "strain=Marseille-P3071T", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/02/09", "asm_name": "Paenibacillus bouchesdurhonensis", "asm_submitter": "URMITE", "gbrs_paired_asm": "GCA_900155685.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/155/685/GCF_900155685.1_Paenibacillus_bouchesdurhonensis", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5824920", "genome_size_ungapped": "5815621", "gc_percent": "47.500000", "replicon_count": "0", "scaffold_count": "8", "contig_count": "33", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900155685.1-RS_2024_12_09", "annotation_date": "2024-12-09", "total_gene_count": "5206", "protein_coding_gene_count": "5019", "non_coding_gene_count": "98", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-02-09", "dateModified": "2017-02-09", "datePublished": "2017-02-09", "_annotation": { "sample_count": 1, "sample_organism": [ "Paenibacillus bouchesdurhonensis" ], "sample_taxid": [ "1870990" ], 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"status": "below_threshold" }, { "organism_name": "Paenibacillus rhizophilus", "strain": "strain=7197", "accession": "GCA_003854965.1", "taxid": 1850366, "species_taxid": 1850366, "relation_to_type": "type", "validated": true, "ani": 76.8109, "matched_fragments": 116, "total_fragments": 1938, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paenibacillus piscarius", "strain": "strain=P121", "accession": "GCA_022234545.1", "taxid": 1089681, "species_taxid": 1089681, "relation_to_type": "type", "validated": true, "ani": 76.3036, "matched_fragments": 130, "total_fragments": 1938, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_900155685.1", "gtdb_species": "s__Paenibacillus_A bouchesdurhonensis", "ani": 100.0, "matched_fragments": 1938, "total_fragments": 1938, "gtdb_taxonomy": 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