{ "type": "genome", "identifier": "GCF_900157365.1", "organism": "Mycobacterium numidiamassiliense", "title": "Mycobacterium numidiamassiliense", "description": "na", "data type": "Genome sequencing and assembly", "organization": "URMITE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_900157365.1", "bioproject": "PRJNA224116", "biosample": "SAMEA54001918", "wgs_master": "FUEZ00000000.1", "refseq_category": "reference genome", "taxid": "1841861", "species_taxid": "1841861", "organism_name": "Mycobacterium numidiamassiliense", "infraspecific_name": "strain=AB215", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/02/01", "asm_name": "PRJEB19151", "asm_submitter": "URMITE", "gbrs_paired_asm": "GCA_900157365.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/157/365/GCF_900157365.1_PRJEB19151", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6248949", "genome_size_ungapped": "6248949", "gc_percent": "66.000000", "replicon_count": "0", "scaffold_count": "4", "contig_count": "4", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_900157365.1-RS_2024_05_03", "annotation_date": "2024-05-03", "total_gene_count": "5861", "protein_coding_gene_count": "5685", "non_coding_gene_count": "57", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-02-01", "dateModified": "2017-02-01", "datePublished": "2017-02-01", "_annotation": { "sample_count": 1, "sample_organism": [ "Mycobacterium numidiamassiliense" ], "sample_taxid": [ "1841861" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], 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95, "status": "conclusive" }, { "organism_name": "Mycobacterium shigaense", "strain": "strain=JCM 32072", "accession": "GCA_002356315.1", "taxid": 722731, "species_taxid": 722731, "relation_to_type": "type", "validated": true, "ani": 84.1391, "matched_fragments": 1325, "total_fragments": 2081, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium shigaense", "strain": "strain=UN-152", "accession": "GCA_002983495.1", "taxid": 722731, "species_taxid": 722731, "relation_to_type": "type", "validated": true, "ani": 84.0505, "matched_fragments": 1343, "total_fragments": 2081, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium florentinum", "strain": "strain=DSM 44852", "accession": "GCA_002101635.1", "taxid": 292462, "species_taxid": 292462, "relation_to_type": "type", "validated": true, "ani": 83.5152, "matched_fragments": 1353, "total_fragments": 2081, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium lentiflavum", "strain": "strain=ATCC 51985", "accession": "GCA_022374895.2", "taxid": 141349, "species_taxid": 141349, "relation_to_type": "type", "validated": true, "ani": 82.978, "matched_fragments": 1347, "total_fragments": 2081, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium ahvazicum", "strain": "strain=AFP003", "accession": "GCA_900176255.2", "taxid": 1964395, "species_taxid": 1964395, "relation_to_type": "type", "validated": true, "ani": 82.9381, "matched_fragments": 1386, "total_fragments": 2081, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium stomatepiae", "strain": "strain=JCM 17783", "accession": "GCA_010731715.1", "taxid": 470076, "species_taxid": 470076, "relation_to_type": "type", "validated": true, "ani": 82.8267, "matched_fragments": 1330, "total_fragments": 2081, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium paraense", "strain": 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