{
    "type": "genome",
    "identifier": "GCF_900166965.1",
    "organism": "Photobacterium piscicola",
    "title": "Photobacterium piscicola",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "UVEG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_900166965.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMEA93355168",
        "wgs_master": "FUZI00000000.1",
        "refseq_category": "na",
        "taxid": "1378299",
        "species_taxid": "1378299",
        "organism_name": "Photobacterium piscicola",
        "infraspecific_name": "strain=NCCB 100098T",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2017/03/17",
        "asm_name": "P.piscicola_NCCB100098T_SPAdes_Prokka_EMBL",
        "asm_submitter": "UVEG",
        "gbrs_paired_asm": "GCA_900166965.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/166/965/GCF_900166965.1_P.piscicola_NCCB100098T_SPAdes_Prokka_EMBL",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4525300",
        "genome_size_ungapped": "4524311",
        "gc_percent": "39.000000",
        "replicon_count": "0",
        "scaffold_count": "65",
        "contig_count": "65",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_900166965.1-RS_2024_08_20",
        "annotation_date": "2024-08-20",
        "total_gene_count": "4209",
        "protein_coding_gene_count": "3916",
        "non_coding_gene_count": "249",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2017-03-17",
    "dateModified": "2017-03-17",
    "datePublished": "2017-03-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Photobacterium piscicola"
        ],
        "sample_taxid": [
            "1378299"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Netherlands"
        ],
        "sample_host_location_id": [],
        "data_size": "1.276 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4525300",
        "Number of Sequences": "65",
        "Longest Sequences (bp)": "1398295",
        "N50 (bp)": "553764",
        "Gap Ratio (%)": "0.021855",
        "GCcontent (%)": "39.2",
        "Number of CDSs": "3981",
        "Average Protein Length": "315.9",
        "Coding Ratio (%)": "83.4",
        "Number of rRNAs": "13",
        "Number of tRNAs": "187",
        "Number of CRISPRs": "3"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Photobacterium piscicola",
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                "accession": "GCA_900166965.1",
                "taxid": 1378299,
                "species_taxid": 1378299,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 1479,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Photobacterium iliopiscarium",
                "strain": "strain=ATCC 51760",
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                "taxid": 56192,
                "species_taxid": 56192,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
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                "accession": "GCA_000950265.1",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Photobacterium carnosum",
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                "accession": "GCA_002849605.1",
                "taxid": 2023717,
                "species_taxid": 2023717,
                "relation_to_type": "type",
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                "matched_fragments": 1161,
                "total_fragments": 1481,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Photobacterium toruni",
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                "taxid": 1935446,
                "species_taxid": 1935446,
                "relation_to_type": "type",
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                "matched_fragments": 1151,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Photobacterium toruni",
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                "accession": "GCA_024529955.1",
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                "species_taxid": 1935446,
                "relation_to_type": "type",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Photobacterium phosphoreum",
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                "accession": "GCA_003026275.1",
                "taxid": 659,
                "species_taxid": 659,
                "relation_to_type": "type",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Photobacterium phosphoreum",
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            },
            {
                "organism_name": "Photobacterium phosphoreum",
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                "ani": 86.5497,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Photobacterium kishitanii",
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                "species_taxid": 318456,
                "relation_to_type": "type",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Photobacterium kishitanii",
                "strain": "strain=pjapo.1.1",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Photobacterium kishitanii",
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                "ani": 85.2792,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Photobacterium andalusiense",
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            },
            {
                "organism_name": "Photobacterium aquimaris",
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            {
                "organism_name": "Photobacterium aquimaris",
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                "ani": 85.1019,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Photobacterium sanguinicancri",
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            {
                "organism_name": "Vibrio marisflavi",
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                "accession": "GCA_921294215.1",
                "taxid": 1216040,
                "species_taxid": 1216040,
                "relation_to_type": "type",
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                "matched_fragments": 128,
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            },
            {
                "organism_name": "Vibrio algicola",
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                "accession": "GCA_009601765.2",
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                "accession": "GCF_900166965.1",
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}